RNA–Protein interactions for RNA: ENST00000470834.5

TNIK-210, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-210ENST00000470834 NISCHQ9Y2I1 1504 aa16.1■□□□□ 0.17
TNIK-210ENST00000470834 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
TNIK-210ENST00000470834 SHROOM4Q9ULL8 1493 aa14.69□□□□□ -0.06
TNIK-210ENST00000470834 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
TNIK-210ENST00000470834 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
TNIK-210ENST00000470834 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
TNIK-210ENST00000470834 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
TNIK-210ENST00000470834 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
TNIK-210ENST00000470834 PPARGC1BQ86YN6 1023 aaKnown RBP13.67□□□□□ -0.22
TNIK-210ENST00000470834 TTBK1Q5TCY1 1321 aaPredicted RBP13.67□□□□□ -0.22
TNIK-210ENST00000470834 ZCCHC6Q5VYS8 1495 aaKnown RBP13.55□□□□□ -0.24
TNIK-210ENST00000470834 LOC105371045A0A1W2PR82 267 aa13.48□□□□□ -0.25
TNIK-210ENST00000470834 HRCP23327 699 aa13.43□□□□□ -0.26
TNIK-210ENST00000470834 RANGAP1P46060 587 aaPredicted RBP13.36□□□□□ -0.27
TNIK-210ENST00000470834 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
TNIK-210ENST00000470834 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
TNIK-210ENST00000470834 ABCC9O60706 1549 aa13.25□□□□□ -0.29
TNIK-210ENST00000470834 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
TNIK-210ENST00000470834 CCER1Q8TC90 406 aaPredicted RBP13.16□□□□□ -0.3
TNIK-210ENST00000470834 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
TNIK-210ENST00000470834 DCAF1Q9Y4B6 1507 aa13.06□□□□□ -0.32
TNIK-210ENST00000470834 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
TNIK-210ENST00000470834 SCRIBQ14160 1630 aa13.03□□□□□ -0.32
TNIK-210ENST00000470834 UBTFP17480 764 aaKnown RBP13.01□□□□□ -0.33
TNIK-210ENST00000470834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
TNIK-210ENST00000470834 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
TNIK-210ENST00000470834 APLP2Q06481 763 aa12.9□□□□□ -0.34
TNIK-210ENST00000470834 CENPBP07199 599 aaPredicted RBP12.9□□□□□ -0.34
TNIK-210ENST00000470834 ATP1B4Q9UN42 357 aaPredicted RBP12.88□□□□□ -0.35
TNIK-210ENST00000470834 MYO15BQ96JP2 1530 aa12.8□□□□□ -0.36
TNIK-210ENST00000470834 PELP1Q8IZL8 1130 aaKnown RBP12.79□□□□□ -0.36
TNIK-210ENST00000470834 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
TNIK-210ENST00000470834 NACADO15069 1562 aa12.77□□□□□ -0.37
TNIK-210ENST00000470834 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
TNIK-210ENST00000470834 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
TNIK-210ENST00000470834 DIEXFQ68CQ4 756 aaKnown RBP12.71□□□□□ -0.37
TNIK-210ENST00000470834 ITGAEP38570 1179 aa12.7□□□□□ -0.38
TNIK-210ENST00000470834 SCAF1Q9H7N4 1312 aaKnown RBP12.67□□□□□ -0.38
TNIK-210ENST00000470834 RSF1Q96T23 1441 aaPredicted RBP12.66□□□□□ -0.38
TNIK-210ENST00000470834 RB1CC1Q8TDY2 1594 aa12.66□□□□□ -0.38
TNIK-210ENST00000470834 UNC13AQ9UPW8 1703 aa12.64□□□□□ -0.39
TNIK-210ENST00000470834 MROH2BQ7Z745 1585 aa12.6□□□□□ -0.39
TNIK-210ENST00000470834 NEUROD1Q13562 356 aa12.58□□□□□ -0.4
TNIK-210ENST00000470834 CNGB1Q14028 1251 aaPredicted RBP12.53□□□□□ -0.4
TNIK-210ENST00000470834 BCANQ96GW7 911 aa12.53□□□□□ -0.4
TNIK-210ENST00000470834 WIZO95785 1651 aa12.53□□□□□ -0.4
TNIK-210ENST00000470834 ACIN1Q9UKV3 1341 aaKnown RBP12.52□□□□□ -0.4
TNIK-210ENST00000470834 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
TNIK-210ENST00000470834 P3H3Q8IVL6 736 aa12.42□□□□□ -0.42
TNIK-210ENST00000470834 ERICH6Q7L0X2 663 aa12.38□□□□□ -0.43
TNIK-210ENST00000470834 ARID3CA6NKF2 412 aa12.38□□□□□ -0.43
TNIK-210ENST00000470834 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
TNIK-210ENST00000470834 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
TNIK-210ENST00000470834 NEFLP07196 543 aa12.33□□□□□ -0.44
TNIK-210ENST00000470834 BAZ1AQ9NRL2 1556 aaPredicted RBP12.33□□□□□ -0.44
TNIK-210ENST00000470834 ZNF316A6NFI3 1004 aaPredicted RBP12.32□□□□□ -0.44
TNIK-210ENST00000470834 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
TNIK-210ENST00000470834 MIER1Q8N108 512 aa12.28□□□□□ -0.44
TNIK-210ENST00000470834 POLR3GLQ9BT43 218 aa12.28□□□□□ -0.44
TNIK-210ENST00000470834 FBLN2P98095 1184 aa12.22□□□□□ -0.45
TNIK-210ENST00000470834 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.45
TNIK-210ENST00000470834 MYT1Q01538 1121 aa12.21□□□□□ -0.45
TNIK-210ENST00000470834 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
TNIK-210ENST00000470834 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
TNIK-210ENST00000470834 HIRIP3Q9BW71 556 aaPredicted RBP12.18□□□□□ -0.46
TNIK-210ENST00000470834 ABCC8Q09428 1581 aa12.17□□□□□ -0.46
TNIK-210ENST00000470834 EIF4G1Q04637 1599 aaKnown RBP12.16□□□□□ -0.46
TNIK-210ENST00000470834 ATAD2BQ9ULI0 1458 aa12.11□□□□□ -0.47
TNIK-210ENST00000470834 SOGA1O94964 1423 aa12.09□□□□□ -0.47
TNIK-210ENST00000470834 TRIM52Q96A61 297 aa12.09□□□□□ -0.47
TNIK-210ENST00000470834 FKBP8Q14318 412 aa12.08□□□□□ -0.48
TNIK-210ENST00000470834 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
TNIK-210ENST00000470834 MYT1LQ9UL68 1186 aa12.06□□□□□ -0.48
TNIK-210ENST00000470834 DDX10Q13206 875 aaKnown RBP12.06□□□□□ -0.48
TNIK-210ENST00000470834 IRX6P78412 446 aaPredicted RBP12.05□□□□□ -0.48
TNIK-210ENST00000470834 PEG3Q9GZU2 1588 aa12.04□□□□□ -0.48
TNIK-210ENST00000470834 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
TNIK-210ENST00000470834 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
TNIK-210ENST00000470834 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
TNIK-210ENST00000470834 ZNF326Q5BKZ1 582 aaKnown RBP12□□□□□ -0.49
TNIK-210ENST00000470834 RUSC2Q8N2Y8 1516 aa11.98□□□□□ -0.49
TNIK-210ENST00000470834 CLIP1P30622 1438 aa11.97□□□□□ -0.49
TNIK-210ENST00000470834 CHIC2Q9UKJ5 165 aa11.96□□□□□ -0.49
TNIK-210ENST00000470834 ZNF777Q9ULD5 760 aaPredicted RBP11.96□□□□□ -0.49
TNIK-210ENST00000470834 DNAJC5BQ9UF47 199 aa11.96□□□□□ -0.5
TNIK-210ENST00000470834 ANP32CO43423 234 aa11.91□□□□□ -0.5
TNIK-210ENST00000470834 SYNJ1O43426 1573 aa11.91□□□□□ -0.5
TNIK-210ENST00000470834 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
TNIK-210ENST00000470834 HNRNPUQ00839 825 aaKnown RBP eCLIP11.87□□□□□ -0.51
TNIK-210ENST00000470834 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
TNIK-210ENST00000470834 KCNH8Q96L42 1107 aa11.85□□□□□ -0.51
TNIK-210ENST00000470834 SUPT16HQ9Y5B9 1047 aaKnown RBP11.85□□□□□ -0.51
TNIK-210ENST00000470834 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
TNIK-210ENST00000470834 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
TNIK-210ENST00000470834 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
TNIK-210ENST00000470834 FAM9BQ8IZU0 186 aa11.83□□□□□ -0.52
TNIK-210ENST00000470834 NBR1Q14596 966 aa11.83□□□□□ -0.52
TNIK-210ENST00000470834 CDK11AQ9UQ88 783 aaPredicted RBP11.83□□□□□ -0.52
TNIK-210ENST00000470834 TNIKQ9UKE5 1360 aa11.82□□□□□ -0.52
TNIK-210ENST00000470834 NPM2Q86SE8 214 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms