RNA–Protein interactions for RNA: ENST00000469275.5

PRKD3-207, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-207ENST00000469275 URB2Q14146 1524 aaKnown RBP9.04□□□□□ -0.96
PRKD3-207ENST00000469275 WDR62O43379 1518 aa9.02□□□□□ -0.97
PRKD3-207ENST00000469275 MRC2Q9UBG0 1479 aa9.01□□□□□ -0.97
PRKD3-207ENST00000469275 FOXD1Q16676 465 aa9.01□□□□□ -0.97
PRKD3-207ENST00000469275 THOC2Q8NI27 1593 aaKnown RBP9□□□□□ -0.97
PRKD3-207ENST00000469275 ABCA10Q8WWZ4 1543 aa8.98□□□□□ -0.97
PRKD3-207ENST00000469275 FHOD3Q2V2M9 1422 aa8.97□□□□□ -0.97
PRKD3-207ENST00000469275 POTEDQ86YR6 584 aa8.97□□□□□ -0.97
PRKD3-207ENST00000469275 ERCC6Q03468 1493 aa8.95□□□□□ -0.98
PRKD3-207ENST00000469275 GAPVD1Q14C86 1478 aa8.94□□□□□ -0.98
PRKD3-207ENST00000469275 ARID3CA6NKF2 412 aa8.94□□□□□ -0.98
PRKD3-207ENST00000469275 AQRO60306 1485 aaKnown RBP eCLIP8.93□□□□□ -0.98
PRKD3-207ENST00000469275 FAM50AQ14320 339 aaKnown RBP8.93□□□□□ -0.98
PRKD3-207ENST00000469275 IFT140Q96RY7 1462 aa8.91□□□□□ -0.98
PRKD3-207ENST00000469275 CCNB3Q8WWL7 1395 aa8.9□□□□□ -0.98
PRKD3-207ENST00000469275 PCF11O94913 1555 aaKnown RBP8.9□□□□□ -0.99
PRKD3-207ENST00000469275 DIEXFQ68CQ4 756 aaKnown RBP8.89□□□□□ -0.99
PRKD3-207ENST00000469275 TIAM1Q13009 1591 aa8.89□□□□□ -0.99
PRKD3-207ENST00000469275 PHLDB1Q86UU1 1377 aa8.89□□□□□ -0.99
PRKD3-207ENST00000469275 MSH5O43196 834 aa8.88□□□□□ -0.99
PRKD3-207ENST00000469275 KCNA4P22459 653 aa8.88□□□□□ -0.99
PRKD3-207ENST00000469275 TARBP1Q13395 1621 aaKnown RBP8.88□□□□□ -0.99
PRKD3-207ENST00000469275 CUL7Q14999 1698 aa8.88□□□□□ -0.99
PRKD3-207ENST00000469275 ABCA5Q8WWZ7 1642 aa8.88□□□□□ -0.99
PRKD3-207ENST00000469275 ZNF608Q9ULD9 1512 aaPredicted RBP8.87□□□□□ -0.99
PRKD3-207ENST00000469275 LRRC9Q6ZRR7 1453 aa8.87□□□□□ -0.99
PRKD3-207ENST00000469275 FHAD1B1AJZ9 1412 aa8.87□□□□□ -0.99
PRKD3-207ENST00000469275 RRBP1Q9P2E9 1410 aaKnown RBP8.87□□□□□ -0.99
PRKD3-207ENST00000469275 FBLN2P98095 1184 aa8.86□□□□□ -0.99
PRKD3-207ENST00000469275 CTTNBP2Q8WZ74 1663 aa8.86□□□□□ -0.99
PRKD3-207ENST00000469275 DHX57Q6P158 1386 aaKnown RBP8.85□□□□□ -0.99
PRKD3-207ENST00000469275 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -1
PRKD3-207ENST00000469275 MTUS2Q5JR59 1369 aa8.82□□□□□ -1
PRKD3-207ENST00000469275 PBRM1Q86U86 1689 aa8.81□□□□□ -1
PRKD3-207ENST00000469275 RAB3GAP2Q9H2M9 1393 aa8.81□□□□□ -1
PRKD3-207ENST00000469275 CASKIN1Q8WXD9 1431 aa8.81□□□□□ -1
PRKD3-207ENST00000469275 FMN1Q68DA7 1419 aa8.81□□□□□ -1
PRKD3-207ENST00000469275 EFCAB5A4FU69 1503 aa8.81□□□□□ -1
PRKD3-207ENST00000469275 FYCO1Q9BQS8 1478 aa8.8□□□□□ -1
PRKD3-207ENST00000469275 SNAPC4Q5SXM2 1469 aa8.79□□□□□ -1
PRKD3-207ENST00000469275 NEUROD1Q13562 356 aa8.79□□□□□ -1
PRKD3-207ENST00000469275 CFAP43Q8NDM7 1665 aa8.79□□□□□ -1
PRKD3-207ENST00000469275 GRIN2BQ13224 1484 aa8.78□□□□□ -1
PRKD3-207ENST00000469275 YTHDC1Q96MU7 727 aaKnown RBP8.78□□□□□ -1
PRKD3-207ENST00000469275 SIN3AQ96ST3 1273 aa8.78□□□□□ -1
PRKD3-207ENST00000469275 MAP3K1Q13233 1512 aa8.78□□□□□ -1
PRKD3-207ENST00000469275 EIF4G3O43432 1585 aaKnown RBP8.77□□□□□ -1.01
PRKD3-207ENST00000469275 CHMP7Q8WUX9 453 aaPredicted RBP8.77□□□□□ -1.01
PRKD3-207ENST00000469275 LRRIQ1Q96JM4 1722 aa8.77□□□□□ -1.01
PRKD3-207ENST00000469275 ADAMTS12P58397 1594 aa8.77□□□□□ -1.01
PRKD3-207ENST00000469275 CHIC2Q9UKJ5 165 aa8.77□□□□□ -1.01
PRKD3-207ENST00000469275 MAGI1Q96QZ7 1491 aaPredicted RBP8.77□□□□□ -1.01
PRKD3-207ENST00000469275 SAMD9Q5K651 1589 aa8.76□□□□□ -1.01
PRKD3-207ENST00000469275 IQGAP2Q13576 1575 aa8.75□□□□□ -1.01
PRKD3-207ENST00000469275 SETD5Q9C0A6 1442 aa8.75□□□□□ -1.01
PRKD3-207ENST00000469275 CDK13Q14004 1512 aaKnown RBP8.74□□□□□ -1.01
PRKD3-207ENST00000469275 MIER1Q8N108 512 aa8.74□□□□□ -1.01
PRKD3-207ENST00000469275 FGD6Q6ZV73 1430 aa8.74□□□□□ -1.01
PRKD3-207ENST00000469275 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
PRKD3-207ENST00000469275 MAGI3Q5TCQ9 1506 aa8.73□□□□□ -1.01
PRKD3-207ENST00000469275 RRP7BPQ9NSQ0 103 aa8.73□□□□□ -1.01
PRKD3-207ENST00000469275 PTPRKQ15262 1439 aa8.72□□□□□ -1.01
PRKD3-207ENST00000469275 HIRIP3Q9BW71 556 aaPredicted RBP8.71□□□□□ -1.02
PRKD3-207ENST00000469275 GRIN2AQ12879 1464 aa8.71□□□□□ -1.02
PRKD3-207ENST00000469275 MAPKBP1O60336 1514 aa8.71□□□□□ -1.02
PRKD3-207ENST00000469275 SCAF1Q9H7N4 1312 aaKnown RBP8.7□□□□□ -1.02
PRKD3-207ENST00000469275 CLSPNQ9HAW4 1339 aa8.7□□□□□ -1.02
PRKD3-207ENST00000469275 EPRSP07814 1512 aaKnown RBP8.69□□□□□ -1.02
PRKD3-207ENST00000469275 MYOM3Q5VTT5 1437 aa8.69□□□□□ -1.02
PRKD3-207ENST00000469275 ZNF644Q9H582 1327 aaPredicted RBP8.68□□□□□ -1.02
PRKD3-207ENST00000469275 SYNJ2O15056 1496 aa8.68□□□□□ -1.02
PRKD3-207ENST00000469275 DISP1Q96F81 1524 aa8.68□□□□□ -1.02
PRKD3-207ENST00000469275 KIAA0586Q9BVV6 1533 aa8.68□□□□□ -1.02
PRKD3-207ENST00000469275 SUPT6HQ7KZ85 1726 aaKnown RBP8.67□□□□□ -1.02
PRKD3-207ENST00000469275 HECW1Q76N89 1606 aa8.67□□□□□ -1.02
PRKD3-207ENST00000469275 JPH4Q96JJ6 628 aa8.67□□□□□ -1.02
PRKD3-207ENST00000469275 ZNF777Q9ULD5 760 aaPredicted RBP8.67□□□□□ -1.02
PRKD3-207ENST00000469275 EHBP1L1Q8N3D4 1523 aa8.67□□□□□ -1.02
PRKD3-207ENST00000469275 TRIM52Q96A61 297 aa8.67□□□□□ -1.02
PRKD3-207ENST00000469275 CEP170Q5SW79 1584 aa8.66□□□□□ -1.02
PRKD3-207ENST00000469275 CCDC18Q5T9S5 1454 aa8.66□□□□□ -1.02
PRKD3-207ENST00000469275 PLB1Q6P1J6 1458 aa8.66□□□□□ -1.02
PRKD3-207ENST00000469275 KIAA0556O60303 1618 aa8.65□□□□□ -1.02
PRKD3-207ENST00000469275 UGGT2Q9NYU1 1516 aa8.65□□□□□ -1.02
PRKD3-207ENST00000469275 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.02
PRKD3-207ENST00000469275 PTPN23Q9H3S7 1636 aa8.65□□□□□ -1.03
PRKD3-207ENST00000469275 NUP153P49790 1475 aaKnown RBP8.64□□□□□ -1.03
PRKD3-207ENST00000469275 PRG4Q92954 1404 aaPredicted RBP8.63□□□□□ -1.03
PRKD3-207ENST00000469275 NAIPQ13075 1403 aa8.63□□□□□ -1.03
PRKD3-207ENST00000469275 CHD1O14646 1710 aa8.62□□□□□ -1.03
PRKD3-207ENST00000469275 HFM1A2PYH4 1435 aa8.62□□□□□ -1.03
PRKD3-207ENST00000469275 CENPBP07199 599 aaPredicted RBP8.62□□□□□ -1.03
PRKD3-207ENST00000469275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.62□□□□□ -1.03
PRKD3-207ENST00000469275 NUP160Q12769 1436 aa8.61□□□□□ -1.03
PRKD3-207ENST00000469275 CDK11AQ9UQ88 783 aaPredicted RBP8.61□□□□□ -1.03
PRKD3-207ENST00000469275 RAPGEF6Q8TEU7 1601 aa8.61□□□□□ -1.03
PRKD3-207ENST00000469275 GTF3C3Q9Y5Q9 886 aa8.6□□□□□ -1.03
PRKD3-207ENST00000469275 ARHGEF11O15085 1522 aa8.6□□□□□ -1.03
PRKD3-207ENST00000469275 TONSLQ96HA7 1378 aa8.6□□□□□ -1.03
PRKD3-207ENST00000469275 DDX10Q13206 875 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms