RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 PITPNM1O00562 1244 aa6.28□□□□□ -1.4
TRIM59-202ENST00000468542 FANCD2Q9BXW9 1451 aa6.27□□□□□ -1.41
TRIM59-202ENST00000468542 MRC2Q9UBG0 1479 aa6.27□□□□□ -1.41
TRIM59-202ENST00000468542 CEP164Q9UPV0 1460 aa6.27□□□□□ -1.41
TRIM59-202ENST00000468542 SUPT5HO00267 1087 aaKnown RBP6.26□□□□□ -1.41
TRIM59-202ENST00000468542 MKRN4PQ13434 485 aaPredicted RBP6.25□□□□□ -1.41
TRIM59-202ENST00000468542 ABCC8Q09428 1581 aa6.24□□□□□ -1.41
TRIM59-202ENST00000468542 ERCC6Q03468 1493 aa6.24□□□□□ -1.41
TRIM59-202ENST00000468542 SPDYE2BA6NHP3 402 aa6.24□□□□□ -1.41
TRIM59-202ENST00000468542 SPDYE6P0CI01 402 aa6.24□□□□□ -1.41
TRIM59-202ENST00000468542 SPDYE2Q495Y8 402 aa6.24□□□□□ -1.41
TRIM59-202ENST00000468542 URB2Q14146 1524 aaKnown RBP6.24□□□□□ -1.41
TRIM59-202ENST00000468542 DNMBPQ6XZF7 1577 aa6.23□□□□□ -1.41
TRIM59-202ENST00000468542 POTEMA6NI47 508 aa6.23□□□□□ -1.41
TRIM59-202ENST00000468542 WDR97A6NE52 1622 aa6.22□□□□□ -1.41
TRIM59-202ENST00000468542 BIVM-ERCC5R4GMW8 1640 aa6.21□□□□□ -1.41
TRIM59-202ENST00000468542 FBLN2P98095 1184 aa6.21□□□□□ -1.42
TRIM59-202ENST00000468542 TARBP1Q13395 1621 aaKnown RBP6.21□□□□□ -1.42
TRIM59-202ENST00000468542 TOPBP1Q92547 1522 aa6.2□□□□□ -1.42
TRIM59-202ENST00000468542 TOP2BQ02880 1626 aa6.18□□□□□ -1.42
TRIM59-202ENST00000468542 CUX1P39880 1505 aa6.18□□□□□ -1.42
TRIM59-202ENST00000468542 POTEGQ6S5H5 508 aa6.17□□□□□ -1.42
TRIM59-202ENST00000468542 SSUH2Q9Y2M2 353 aa6.17□□□□□ -1.42
TRIM59-202ENST00000468542 POLA1P09884 1462 aaPredicted RBP6.15□□□□□ -1.42
TRIM59-202ENST00000468542 IFT140Q96RY7 1462 aa6.15□□□□□ -1.42
TRIM59-202ENST00000468542 SYNJ1O43426 1573 aa6.14□□□□□ -1.43
TRIM59-202ENST00000468542 SPDYE1Q8NFV5 336 aaPredicted RBP6.13□□□□□ -1.43
TRIM59-202ENST00000468542 PCDH10Q9P2E7 1040 aa6.13□□□□□ -1.43
TRIM59-202ENST00000468542 EIF4G3O43432 1585 aaKnown RBP6.13□□□□□ -1.43
TRIM59-202ENST00000468542 ABCA5Q8WWZ7 1642 aa6.13□□□□□ -1.43
TRIM59-202ENST00000468542 ABCA10Q8WWZ4 1543 aa6.12□□□□□ -1.43
TRIM59-202ENST00000468542 FGD5Q6ZNL6 1462 aa6.11□□□□□ -1.43
TRIM59-202ENST00000468542 GABBR2O75899 941 aa6.11□□□□□ -1.43
TRIM59-202ENST00000468542 ZNF692Q9BU19 519 aaPredicted RBP6.11□□□□□ -1.43
TRIM59-202ENST00000468542 WRNQ14191 1432 aaPredicted RBP eCLIP6.1□□□□□ -1.43
TRIM59-202ENST00000468542 PBRM1Q86U86 1689 aa6.1□□□□□ -1.43
TRIM59-202ENST00000468542 C19orf67A6NJJ6 358 aa6.09□□□□□ -1.43
TRIM59-202ENST00000468542 PRKAR2AP13861 404 aaKnown RBP6.09□□□□□ -1.43
TRIM59-202ENST00000468542 ZNF608Q9ULD9 1512 aaPredicted RBP6.09□□□□□ -1.44
TRIM59-202ENST00000468542 CSRNP3Q8WYN3 585 aa6.08□□□□□ -1.44
TRIM59-202ENST00000468542 CLEC11AQ9Y240 323 aa6.07□□□□□ -1.44
TRIM59-202ENST00000468542 ERICH3Q5RHP9 1530 aa6.07□□□□□ -1.44
TRIM59-202ENST00000468542 SOGA1O94964 1423 aa6.07□□□□□ -1.44
TRIM59-202ENST00000468542 MAGI1Q96QZ7 1491 aaPredicted RBP6.06□□□□□ -1.44
TRIM59-202ENST00000468542 RAD54L2Q9Y4B4 1467 aa6.05□□□□□ -1.44
TRIM59-202ENST00000468542 CHD1O14646 1710 aa6.05□□□□□ -1.44
TRIM59-202ENST00000468542 GRIN2BQ13224 1484 aa6.04□□□□□ -1.44
TRIM59-202ENST00000468542 ADAMTS12P58397 1594 aa6.03□□□□□ -1.44
TRIM59-202ENST00000468542 CHADLQ6NUI6 762 aa6.03□□□□□ -1.44
TRIM59-202ENST00000468542 GAPVD1Q14C86 1478 aa6.02□□□□□ -1.44
TRIM59-202ENST00000468542 CUL7Q14999 1698 aa6.02□□□□□ -1.45
TRIM59-202ENST00000468542 CLASP1Q7Z460 1538 aa6.02□□□□□ -1.45
TRIM59-202ENST00000468542 AQRO60306 1485 aaKnown RBP eCLIP6.02□□□□□ -1.458e-7■■■■■ 28.7
TRIM59-202ENST00000468542 SYNJ2O15056 1496 aa6.01□□□□□ -1.45
TRIM59-202ENST00000468542 SHROOM2Q13796 1616 aa6□□□□□ -1.45
TRIM59-202ENST00000468542 SNAPC4Q5SXM2 1469 aa5.99□□□□□ -1.45
TRIM59-202ENST00000468542 TDRD9Q8NDG6 1382 aaKnown RBP5.99□□□□□ -1.45
TRIM59-202ENST00000468542 DNAJC5Q9H3Z4 198 aa5.99□□□□□ -1.45
TRIM59-202ENST00000468542 NUP160Q12769 1436 aa5.99□□□□□ -1.45
TRIM59-202ENST00000468542 PRR29P0C7W0 189 aa5.98□□□□□ -1.45
TRIM59-202ENST00000468542 FHAD1B1AJZ9 1412 aa5.98□□□□□ -1.45
TRIM59-202ENST00000468542 GRIN2AQ12879 1464 aa5.97□□□□□ -1.45
TRIM59-202ENST00000468542 POTEIP0CG38 1075 aa5.97□□□□□ -1.45
TRIM59-202ENST00000468542 KIF27Q86VH2 1401 aa5.97□□□□□ -1.45
TRIM59-202ENST00000468542 CLCN6P51797 869 aa5.96□□□□□ -1.46
TRIM59-202ENST00000468542 TRIM41Q8WV44 630 aa5.96□□□□□ -1.46
TRIM59-202ENST00000468542 CEP170Q5SW79 1584 aa5.96□□□□□ -1.46
TRIM59-202ENST00000468542 IGF1RP08069 1367 aa5.95□□□□□ -1.46
TRIM59-202ENST00000468542 RUSC2Q8N2Y8 1516 aa5.95□□□□□ -1.46
TRIM59-202ENST00000468542 PRXQ9BXM0 1461 aa5.94□□□□□ -1.46
TRIM59-202ENST00000468542 EEA1Q15075 1411 aa5.93□□□□□ -1.46
TRIM59-202ENST00000468542 RIMBP3CA6NJZ7 1639 aa5.93□□□□□ -1.46
TRIM59-202ENST00000468542 RIMBP3BA6NNM3 1639 aa5.93□□□□□ -1.46
TRIM59-202ENST00000468542 RIMBP3Q9UFD9 1639 aa5.93□□□□□ -1.46
TRIM59-202ENST00000468542 OTUD5Q96G74 571 aa5.93□□□□□ -1.46
TRIM59-202ENST00000468542 FARP1Q9Y4F1 1045 aaPredicted RBP5.93□□□□□ -1.46
TRIM59-202ENST00000468542 CTTNBP2Q8WZ74 1663 aa5.92□□□□□ -1.46
TRIM59-202ENST00000468542 ARHGEF11O15085 1522 aa5.92□□□□□ -1.46
TRIM59-202ENST00000468542 CHMP7Q8WUX9 453 aaPredicted RBP5.91□□□□□ -1.46
TRIM59-202ENST00000468542 KIAA0586Q9BVV6 1533 aa5.9□□□□□ -1.46
TRIM59-202ENST00000468542 KIF21BO75037 1637 aa5.9□□□□□ -1.46
TRIM59-202ENST00000468542 STAG3Q9UJ98 1225 aa5.9□□□□□ -1.46
TRIM59-202ENST00000468542 CREBZFQ9NS37 354 aa5.89□□□□□ -1.47
TRIM59-202ENST00000468542 CARMIL1Q5VZK9 1371 aa5.89□□□□□ -1.47
TRIM59-202ENST00000468542 RAPGEF2Q9Y4G8 1499 aa5.89□□□□□ -1.47
TRIM59-202ENST00000468542 UGGT2Q9NYU1 1516 aa5.89□□□□□ -1.47
TRIM59-202ENST00000468542 CD44P16070 742 aaKnown RBP5.88□□□□□ -1.47
TRIM59-202ENST00000468542 IQGAP2Q13576 1575 aa5.88□□□□□ -1.47
TRIM59-202ENST00000468542 ARAP1Q96P48 1450 aa5.87□□□□□ -1.47
TRIM59-202ENST00000468542 SAMD9Q5K651 1589 aa5.85□□□□□ -1.47
TRIM59-202ENST00000468542 ERCC6L2Q5T890 1561 aa5.85□□□□□ -1.47
TRIM59-202ENST00000468542 DISP1Q96F81 1524 aa5.84□□□□□ -1.47
TRIM59-202ENST00000468542 KIAA0556O60303 1618 aa5.83□□□□□ -1.48
TRIM59-202ENST00000468542 MNX1P50219 401 aaPredicted RBP5.82□□□□□ -1.48
TRIM59-202ENST00000468542 ZNF579Q8NAF0 562 aaKnown RBP5.82□□□□□ -1.48
TRIM59-202ENST00000468542 SPDYE4A6NLX3 237 aa5.81□□□□□ -1.48
TRIM59-202ENST00000468542 JPH4Q96JJ6 628 aa5.81□□□□□ -1.48
TRIM59-202ENST00000468542 UHRF1BP1LA0JNW5 1464 aa5.81□□□□□ -1.48
TRIM59-202ENST00000468542 EFCAB5A4FU69 1503 aa5.8□□□□□ -1.48
TRIM59-202ENST00000468542 EHMT2Q96KQ7 1210 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms