RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
TRIM59-202ENST00000468542 CHIC1Q5VXU3 224 aa10.98□□□□□ -0.65
TRIM59-202ENST00000468542 POTEDQ86YR6 584 aa10.37□□□□□ -0.75
TRIM59-202ENST00000468542 SENP3Q9H4L4 574 aaPredicted RBP9.88□□□□□ -0.83
TRIM59-202ENST00000468542 PHF23Q9BUL5 403 aaPredicted RBP9.79□□□□□ -0.84
TRIM59-202ENST00000468542 FOXD1Q16676 465 aa9.29□□□□□ -0.92
TRIM59-202ENST00000468542 MSH5O43196 834 aa8.93□□□□□ -0.98
TRIM59-202ENST00000468542 PLPPR3Q6T4P5 718 aa8.67□□□□□ -1.02
TRIM59-202ENST00000468542 PPP6R1Q9UPN7 881 aa8.67□□□□□ -1.02
TRIM59-202ENST00000468542 NISCHQ9Y2I1 1504 aa8.59□□□□□ -1.03
TRIM59-202ENST00000468542 ADRA2BP18089 450 aa8.58□□□□□ -1.04
TRIM59-202ENST00000468542 PIAS4Q8N2W9 510 aaPredicted RBP8.57□□□□□ -1.04
TRIM59-202ENST00000468542 CACNB1Q02641 598 aaPredicted RBP8.27□□□□□ -1.09
TRIM59-202ENST00000468542 POTEHQ6S545 545 aa7.94□□□□□ -1.14
TRIM59-202ENST00000468542 MAPK8IP2Q13387 824 aaPredicted RBP7.93□□□□□ -1.14
TRIM59-202ENST00000468542 DMRT2Q9Y5R5 561 aa7.86□□□□□ -1.15
TRIM59-202ENST00000468542 SCAF1Q9H7N4 1312 aaKnown RBP7.8□□□□□ -1.16
TRIM59-202ENST00000468542 CCDC180Q9P1Z9 1646 aa7.73□□□□□ -1.17
TRIM59-202ENST00000468542 PPP4R3CPQ6ZMV5 832 aa7.62□□□□□ -1.19
TRIM59-202ENST00000468542 HOXD11P31277 338 aaPredicted RBP7.58□□□□□ -1.2
TRIM59-202ENST00000468542 RNF39Q9H2S5 420 aa7.51□□□□□ -1.21
TRIM59-202ENST00000468542 CNKSR2Q8WXI2 1034 aa7.49□□□□□ -1.21
TRIM59-202ENST00000468542 RNF216Q9NWF9 866 aaPredicted RBP7.45□□□□□ -1.22
TRIM59-202ENST00000468542 DCAF8L1A6NGE4 600 aa7.4□□□□□ -1.22
TRIM59-202ENST00000468542 DNAJC5BQ9UF47 199 aa7.4□□□□□ -1.22
TRIM59-202ENST00000468542 C1QBPQ07021 282 aaKnown RBP7.35□□□□□ -1.23
TRIM59-202ENST00000468542 NCBP3Q53F19 620 aaKnown RBP7.28□□□□□ -1.24
TRIM59-202ENST00000468542 ABCC9O60706 1549 aa7.27□□□□□ -1.25
TRIM59-202ENST00000468542 MYO15BQ96JP2 1530 aa7.27□□□□□ -1.25
TRIM59-202ENST00000468542 DCAF1Q9Y4B6 1507 aa7.22□□□□□ -1.25
TRIM59-202ENST00000468542 NPM3O75607 178 aaKnown RBP7.2□□□□□ -1.26
TRIM59-202ENST00000468542 ZCCHC6Q5VYS8 1495 aaKnown RBP7.19□□□□□ -1.26
TRIM59-202ENST00000468542 NACADO15069 1562 aa7.19□□□□□ -1.26
TRIM59-202ENST00000468542 RB1CC1Q8TDY2 1594 aa7.15□□□□□ -1.27
TRIM59-202ENST00000468542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.09□□□□□ -1.27
TRIM59-202ENST00000468542 UNC13AQ9UPW8 1703 aa7.08□□□□□ -1.28
TRIM59-202ENST00000468542 U3KPZ7 1027 aaPredicted RBP7.02□□□□□ -1.29
TRIM59-202ENST00000468542 PLSCR2Q9NRY7 297 aa7□□□□□ -1.29
TRIM59-202ENST00000468542 BICRAQ9NZM4 1560 aa6.99□□□□□ -1.29
TRIM59-202ENST00000468542 SHROOM4Q9ULL8 1493 aa6.98□□□□□ -1.29
TRIM59-202ENST00000468542 KCNA4P22459 653 aa6.98□□□□□ -1.29
TRIM59-202ENST00000468542 SP7Q8TDD2 431 aaPredicted RBP6.98□□□□□ -1.29
TRIM59-202ENST00000468542 SLC4A2P04920 1241 aa6.95□□□□□ -1.3
TRIM59-202ENST00000468542 DSG3P32926 999 aa6.94□□□□□ -1.3
TRIM59-202ENST00000468542 SPINK5Q9NQ38 1064 aaPredicted RBP6.94□□□□□ -1.3
TRIM59-202ENST00000468542 DCAF8L2P0C7V8 631 aa6.93□□□□□ -1.3
TRIM59-202ENST00000468542 SCRIBQ14160 1630 aa6.86□□□□□ -1.31
TRIM59-202ENST00000468542 CAPN15O75808 1086 aa6.85□□□□□ -1.31
TRIM59-202ENST00000468542 APLP2Q06481 763 aa6.81□□□□□ -1.32
TRIM59-202ENST00000468542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.79□□□□□ -1.32
TRIM59-202ENST00000468542 HNRNPUL2Q1KMD3 747 aaKnown RBP6.79□□□□□ -1.32
TRIM59-202ENST00000468542 EIF4G1Q04637 1599 aaKnown RBP6.74□□□□□ -1.33
TRIM59-202ENST00000468542 ZNF219Q9P2Y4 722 aaPredicted RBP6.74□□□□□ -1.33
TRIM59-202ENST00000468542 TRHP20396 242 aaPredicted RBP6.73□□□□□ -1.33
TRIM59-202ENST00000468542 PABPN1Q86U42 306 aaKnown RBP eCLIP6.73□□□□□ -1.33
TRIM59-202ENST00000468542 SAMD1Q6SPF0 538 aaPredicted RBP6.72□□□□□ -1.33
TRIM59-202ENST00000468542 PEG3Q9GZU2 1588 aa6.7□□□□□ -1.34
TRIM59-202ENST00000468542 ABCB7O75027 752 aa6.7□□□□□ -1.34
TRIM59-202ENST00000468542 CHRDL2Q6WN34 429 aa6.69□□□□□ -1.34
TRIM59-202ENST00000468542 CC2D2AQ9P2K1 1620 aa6.68□□□□□ -1.34
TRIM59-202ENST00000468542 SMARCA4P51532 1647 aa6.67□□□□□ -1.34
TRIM59-202ENST00000468542 BAZ1AQ9NRL2 1556 aaPredicted RBP6.65□□□□□ -1.34
TRIM59-202ENST00000468542 MYCNP04198 464 aaPredicted RBP6.63□□□□□ -1.35
TRIM59-202ENST00000468542 HMGXB3Q12766 1538 aa6.63□□□□□ -1.35
TRIM59-202ENST00000468542 NCAPD3P42695 1498 aa6.62□□□□□ -1.35
TRIM59-202ENST00000468542 CECR2Q9BXF3 1484 aa6.61□□□□□ -1.35
TRIM59-202ENST00000468542 SMARCA2P51531 1590 aa6.61□□□□□ -1.35
TRIM59-202ENST00000468542 ATAD2BQ9ULI0 1458 aa6.59□□□□□ -1.36
TRIM59-202ENST00000468542 MROH2BQ7Z745 1585 aa6.57□□□□□ -1.36
TRIM59-202ENST00000468542 POLA2Q14181 598 aa6.57□□□□□ -1.36
TRIM59-202ENST00000468542 RBM42Q9BTD8 480 aaKnown RBP6.57□□□□□ -1.36
TRIM59-202ENST00000468542 ATF5Q9Y2D1 282 aaPredicted RBP6.56□□□□□ -1.36
TRIM59-202ENST00000468542 LHX8Q68G74 356 aa6.53□□□□□ -1.36
TRIM59-202ENST00000468542 SLC4A1APQ9BWU0 796 aaKnown RBP6.52□□□□□ -1.37
TRIM59-202ENST00000468542 RSF1Q96T23 1441 aaPredicted RBP6.51□□□□□ -1.37
TRIM59-202ENST00000468542 FOXD4L1Q9NU39 408 aa6.51□□□□□ -1.37
TRIM59-202ENST00000468542 WIZO95785 1651 aa6.51□□□□□ -1.37
TRIM59-202ENST00000468542 HAX1O00165 279 aa6.49□□□□□ -1.37
TRIM59-202ENST00000468542 BAZ1BQ9UIG0 1483 aaKnown RBP6.48□□□□□ -1.37
TRIM59-202ENST00000468542 TOP2AP11388 1531 aaKnown RBP6.48□□□□□ -1.37
TRIM59-202ENST00000468542 ZBTB12Q9Y330 459 aaPredicted RBP6.46□□□□□ -1.38
TRIM59-202ENST00000468542 PRDM2Q13029 1718 aa6.45□□□□□ -1.38
TRIM59-202ENST00000468542 LAMC3Q9Y6N6 1575 aa6.45□□□□□ -1.38
TRIM59-202ENST00000468542 ZBTB22O15209 634 aa6.45□□□□□ -1.38
TRIM59-202ENST00000468542 AKT1S1Q96B36 256 aa6.41□□□□□ -1.38
TRIM59-202ENST00000468542 ATXN8OSP0DMR3 200 aa6.4□□□□□ -1.38
TRIM59-202ENST00000468542 CFTRP13569 1480 aa6.39□□□□□ -1.39
TRIM59-202ENST00000468542 KIF21AQ7Z4S6 1674 aa6.36□□□□□ -1.39
TRIM59-202ENST00000468542 THOC2Q8NI27 1593 aaKnown RBP6.36□□□□□ -1.39
TRIM59-202ENST00000468542 CADPSQ9ULU8 1353 aa6.36□□□□□ -1.39
TRIM59-202ENST00000468542 REM2Q8IYK8 340 aaPredicted RBP6.36□□□□□ -1.39
TRIM59-202ENST00000468542 CCDC88BA6NC98 1476 aa6.34□□□□□ -1.39
TRIM59-202ENST00000468542 NESP48681 1621 aa6.34□□□□□ -1.39
TRIM59-202ENST00000468542 OSCARQ8IYS5 282 aa6.33□□□□□ -1.4
TRIM59-202ENST00000468542 PIP4P2Q8N4L2 257 aa6.32□□□□□ -1.4
TRIM59-202ENST00000468542 PDS5BQ9NTI5 1447 aa6.32□□□□□ -1.4
TRIM59-202ENST00000468542 WDR62O43379 1518 aa6.31□□□□□ -1.4
TRIM59-202ENST00000468542 CUX2O14529 1486 aa6.31□□□□□ -1.4
TRIM59-202ENST00000468542 EVX2Q03828 476 aa6.31□□□□□ -1.4
TRIM59-202ENST00000468542 FXR2P51116 673 aaKnown RBP eCLIP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms