RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 ABCA5Q8WWZ7 1642 aa10.28□□□□□ -0.76
PRKCB-204ENST00000466124 ABCA10Q8WWZ4 1543 aa10.27□□□□□ -0.77
PRKCB-204ENST00000466124 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
PRKCB-204ENST00000466124 NUP160Q12769 1436 aa10.26□□□□□ -0.77
PRKCB-204ENST00000466124 KIF13AQ9H1H9 1805 aa10.26□□□□□ -0.77
PRKCB-204ENST00000466124 GRIN2AQ12879 1464 aa10.25□□□□□ -0.77
PRKCB-204ENST00000466124 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
PRKCB-204ENST00000466124 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
PRKCB-204ENST00000466124 DMRT2Q9Y5R5 561 aa10.2□□□□□ -0.78
PRKCB-204ENST00000466124 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
PRKCB-204ENST00000466124 ABCC10Q5T3U5 1492 aa10.17□□□□□ -0.78
PRKCB-204ENST00000466124 FHAD1B1AJZ9 1412 aa10.17□□□□□ -0.78
PRKCB-204ENST00000466124 MAPKBP1O60336 1514 aa10.16□□□□□ -0.78
PRKCB-204ENST00000466124 KDM4FA0A1W2PPD8 638 aa10.15□□□□□ -0.78
PRKCB-204ENST00000466124 DIP2BQ9P265 1576 aa10.14□□□□□ -0.79
PRKCB-204ENST00000466124 ILDR1Q86SU0 546 aaPredicted RBP10.14□□□□□ -0.79
PRKCB-204ENST00000466124 WRNQ14191 1432 aaPredicted RBP eCLIP10.14□□□□□ -0.79
PRKCB-204ENST00000466124 PRG4Q92954 1404 aaPredicted RBP10.14□□□□□ -0.79
PRKCB-204ENST00000466124 ERICH3Q5RHP9 1530 aa10.13□□□□□ -0.79
PRKCB-204ENST00000466124 FAM69CQ0P6D2 419 aa10.13□□□□□ -0.79
PRKCB-204ENST00000466124 KDM6BO15054 1643 aa10.12□□□□□ -0.79
PRKCB-204ENST00000466124 EHMT2Q96KQ7 1210 aa10.12□□□□□ -0.79
PRKCB-204ENST00000466124 RNF216Q9NWF9 866 aaPredicted RBP10.11□□□□□ -0.79
PRKCB-204ENST00000466124 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
PRKCB-204ENST00000466124 RUSC2Q8N2Y8 1516 aa10.09□□□□□ -0.79
PRKCB-204ENST00000466124 BIVM-ERCC5R4GMW8 1640 aa10.09□□□□□ -0.79
PRKCB-204ENST00000466124 TOP2BQ02880 1626 aa10.08□□□□□ -0.8
PRKCB-204ENST00000466124 ADCY10Q96PN6 1610 aa10.08□□□□□ -0.8
PRKCB-204ENST00000466124 NPM1P06748 294 aaKnown RBP eCLIP10.08□□□□□ -0.8
PRKCB-204ENST00000466124 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
PRKCB-204ENST00000466124 TSPOAP1O95153 1857 aa10.02□□□□□ -0.8
PRKCB-204ENST00000466124 ADGRL1O94910 1474 aa10□□□□□ -0.81
PRKCB-204ENST00000466124 KIAA0586Q9BVV6 1533 aa9.99□□□□□ -0.81
PRKCB-204ENST00000466124 PPRC1Q5VV67 1664 aaKnown RBP9.98□□□□□ -0.81
PRKCB-204ENST00000466124 GLI2P10070 1586 aa9.97□□□□□ -0.81
PRKCB-204ENST00000466124 HECW2Q9P2P5 1572 aa9.97□□□□□ -0.81
PRKCB-204ENST00000466124 ABCC2Q92887 1545 aa9.96□□□□□ -0.82
PRKCB-204ENST00000466124 PLB1Q6P1J6 1458 aa9.94□□□□□ -0.82
PRKCB-204ENST00000466124 PTPRGP23470 1445 aa9.94□□□□□ -0.82
PRKCB-204ENST00000466124 ASXL2Q76L83 1435 aa9.94□□□□□ -0.82
PRKCB-204ENST00000466124 COL17A1Q9UMD9 1497 aaPredicted RBP9.93□□□□□ -0.82
PRKCB-204ENST00000466124 UHRF1BP1LA0JNW5 1464 aa9.91□□□□□ -0.82
PRKCB-204ENST00000466124 IGF1RP08069 1367 aa9.91□□□□□ -0.82
PRKCB-204ENST00000466124 CUL7Q14999 1698 aa9.91□□□□□ -0.82
PRKCB-204ENST00000466124 CSRNP3Q8WYN3 585 aa9.91□□□□□ -0.82
PRKCB-204ENST00000466124 TNIKQ9UKE5 1360 aa9.9□□□□□ -0.82
PRKCB-204ENST00000466124 MAP3K4Q9Y6R4 1608 aa9.9□□□□□ -0.82
PRKCB-204ENST00000466124 EPRSP07814 1512 aaKnown RBP9.88□□□□□ -0.83
PRKCB-204ENST00000466124 TEX14Q8IWB6 1497 aa9.88□□□□□ -0.83
PRKCB-204ENST00000466124 CARMIL2Q6F5E8 1435 aa9.88□□□□□ -0.83
PRKCB-204ENST00000466124 ZBTB22O15209 634 aa9.87□□□□□ -0.83
PRKCB-204ENST00000466124 UACAQ9BZF9 1416 aa9.87□□□□□ -0.83
PRKCB-204ENST00000466124 KDM5BQ9UGL1 1544 aa9.87□□□□□ -0.83
PRKCB-204ENST00000466124 KIF27Q86VH2 1401 aa9.86□□□□□ -0.83
PRKCB-204ENST00000466124 SUPT5HO00267 1087 aaKnown RBP9.85□□□□□ -0.83
PRKCB-204ENST00000466124 FBXO41Q8TF61 875 aa9.85□□□□□ -0.83
PRKCB-204ENST00000466124 IQGAP2Q13576 1575 aa9.84□□□□□ -0.83
PRKCB-204ENST00000466124 TTBK1Q5TCY1 1321 aaPredicted RBP9.83□□□□□ -0.84
PRKCB-204ENST00000466124 DISP1Q96F81 1524 aa9.83□□□□□ -0.84
PRKCB-204ENST00000466124 ZCCHC11Q5TAX3 1644 aaKnown RBP9.82□□□□□ -0.84
PRKCB-204ENST00000466124 CARMIL1Q5VZK9 1371 aa9.82□□□□□ -0.84
PRKCB-204ENST00000466124 WDR7Q9Y4E6 1490 aa9.8□□□□□ -0.84
PRKCB-204ENST00000466124 MAGI3Q5TCQ9 1506 aa9.8□□□□□ -0.84
PRKCB-204ENST00000466124 UGGT2Q9NYU1 1516 aa9.79□□□□□ -0.84
PRKCB-204ENST00000466124 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
PRKCB-204ENST00000466124 KIAA0556O60303 1618 aa9.77□□□□□ -0.85
PRKCB-204ENST00000466124 CFAP43Q8NDM7 1665 aa9.77□□□□□ -0.85
PRKCB-204ENST00000466124 KIF21BO75037 1637 aa9.76□□□□□ -0.85
PRKCB-204ENST00000466124 CD109Q6YHK3 1445 aa9.75□□□□□ -0.85
PRKCB-204ENST00000466124 SLC4A2P04920 1241 aa9.75□□□□□ -0.85
PRKCB-204ENST00000466124 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
PRKCB-204ENST00000466124 ADAMTSL3P82987 1691 aa9.73□□□□□ -0.85
PRKCB-204ENST00000466124 PTPRMP28827 1452 aa9.72□□□□□ -0.85
PRKCB-204ENST00000466124 ARAP3Q8WWN8 1544 aa9.72□□□□□ -0.85
PRKCB-204ENST00000466124 RAPGEF2Q9Y4G8 1499 aa9.71□□□□□ -0.86
PRKCB-204ENST00000466124 ABCA8O94911 1581 aa9.71□□□□□ -0.86
PRKCB-204ENST00000466124 PCF11O94913 1555 aaKnown RBP9.7□□□□□ -0.86
PRKCB-204ENST00000466124 LMTK3Q96Q04 1460 aa9.69□□□□□ -0.86
PRKCB-204ENST00000466124 KCNH8Q96L42 1107 aa9.67□□□□□ -0.86
PRKCB-204ENST00000466124 GOLGA3Q08378 1498 aa9.66□□□□□ -0.86
PRKCB-204ENST00000466124 PHLDB1Q86UU1 1377 aa9.66□□□□□ -0.86
PRKCB-204ENST00000466124 BCORL1Q5H9F3 1711 aa9.66□□□□□ -0.86
PRKCB-204ENST00000466124 MADDQ8WXG6 1647 aa9.65□□□□□ -0.86
PRKCB-204ENST00000466124 CTTNBP2Q8WZ74 1663 aa9.64□□□□□ -0.87
PRKCB-204ENST00000466124 ABCA9Q8IUA7 1624 aa9.64□□□□□ -0.87
PRKCB-204ENST00000466124 FRMPD1Q5SYB0 1578 aa9.63□□□□□ -0.87
PRKCB-204ENST00000466124 NEO1Q92859 1461 aa9.62□□□□□ -0.87
PRKCB-204ENST00000466124 RAPGEF3O95398 923 aa9.61□□□□□ -0.87
PRKCB-204ENST00000466124 POTEDQ86YR6 584 aa9.61□□□□□ -0.87
PRKCB-204ENST00000466124 ATP10BO94823 1461 aa9.6□□□□□ -0.87
PRKCB-204ENST00000466124 ARHGEF40Q8TER5 1519 aa9.6□□□□□ -0.87
PRKCB-204ENST00000466124 RIMS1Q86UR5 1692 aaKnown RBP9.59□□□□□ -0.87
PRKCB-204ENST00000466124 CERKQ8TCT0 537 aa9.59□□□□□ -0.87
PRKCB-204ENST00000466124 SOCS7O14512 581 aa9.58□□□□□ -0.88
PRKCB-204ENST00000466124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.58□□□□□ -0.88
PRKCB-204ENST00000466124 ARID4BQ4LE39 1312 aaPredicted RBP9.57□□□□□ -0.88
PRKCB-204ENST00000466124 ILDR2Q71H61 639 aa9.57□□□□□ -0.88
PRKCB-204ENST00000466124 HSPA2P54652 639 aa9.56□□□□□ -0.88
PRKCB-204ENST00000466124 PRXQ9BXM0 1461 aa9.55□□□□□ -0.88
PRKCB-204ENST00000466124 FHOD3Q2V2M9 1422 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms