RNA–Protein interactions for RNA: ENST00000463875.6

GTDC1-212, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTDC1, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-212ENST00000463875 DIP2BQ9P265 1576 aa13.01□□□□□ -0.33
GTDC1-212ENST00000463875 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
GTDC1-212ENST00000463875 HECW2Q9P2P5 1572 aa12.98□□□□□ -0.33
GTDC1-212ENST00000463875 PRG4Q92954 1404 aaPredicted RBP12.98□□□□□ -0.33
GTDC1-212ENST00000463875 ADGRL1O94910 1474 aa12.97□□□□□ -0.33
GTDC1-212ENST00000463875 FHAD1B1AJZ9 1412 aa12.94□□□□□ -0.34
GTDC1-212ENST00000463875 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
GTDC1-212ENST00000463875 JPH4Q96JJ6 628 aa12.94□□□□□ -0.34
GTDC1-212ENST00000463875 PHF23Q9BUL5 403 aaPredicted RBP12.93□□□□□ -0.34
GTDC1-212ENST00000463875 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
GTDC1-212ENST00000463875 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
GTDC1-212ENST00000463875 ADCY10Q96PN6 1610 aa12.87□□□□□ -0.35
GTDC1-212ENST00000463875 WRNQ14191 1432 aaPredicted RBP eCLIP12.86□□□□□ -0.35
GTDC1-212ENST00000463875 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
GTDC1-212ENST00000463875 LMTK3Q96Q04 1460 aa12.82□□□□□ -0.36
GTDC1-212ENST00000463875 GLI2P10070 1586 aa12.79□□□□□ -0.36
GTDC1-212ENST00000463875 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
GTDC1-212ENST00000463875 RUSC2Q8N2Y8 1516 aa12.77□□□□□ -0.36
GTDC1-212ENST00000463875 PLB1Q6P1J6 1458 aa12.77□□□□□ -0.37
GTDC1-212ENST00000463875 SOCS7O14512 581 aa12.75□□□□□ -0.37
GTDC1-212ENST00000463875 PPRC1Q5VV67 1664 aaKnown RBP12.75□□□□□ -0.37
GTDC1-212ENST00000463875 TEX14Q8IWB6 1497 aa12.74□□□□□ -0.37
GTDC1-212ENST00000463875 COL17A1Q9UMD9 1497 aaPredicted RBP12.74□□□□□ -0.37
GTDC1-212ENST00000463875 ASXL2Q76L83 1435 aa12.73□□□□□ -0.37
GTDC1-212ENST00000463875 ABCC2Q92887 1545 aa12.72□□□□□ -0.37
GTDC1-212ENST00000463875 KIAA0586Q9BVV6 1533 aa12.72□□□□□ -0.37
GTDC1-212ENST00000463875 PTPRGP23470 1445 aa12.71□□□□□ -0.37
GTDC1-212ENST00000463875 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
GTDC1-212ENST00000463875 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
GTDC1-212ENST00000463875 UHRF1BP1LA0JNW5 1464 aa12.65□□□□□ -0.38
GTDC1-212ENST00000463875 EPRSP07814 1512 aaKnown RBP12.64□□□□□ -0.39
GTDC1-212ENST00000463875 TNIKQ9UKE5 1360 aa12.64□□□□□ -0.39
GTDC1-212ENST00000463875 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
GTDC1-212ENST00000463875 ILDR2Q71H61 639 aa12.62□□□□□ -0.39
GTDC1-212ENST00000463875 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
GTDC1-212ENST00000463875 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
GTDC1-212ENST00000463875 KDM5BQ9UGL1 1544 aa12.58□□□□□ -0.4
GTDC1-212ENST00000463875 CUL7Q14999 1698 aa12.57□□□□□ -0.4
GTDC1-212ENST00000463875 PTPRMP28827 1452 aa12.57□□□□□ -0.4
GTDC1-212ENST00000463875 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
GTDC1-212ENST00000463875 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
GTDC1-212ENST00000463875 MAGI3Q5TCQ9 1506 aa12.55□□□□□ -0.4
GTDC1-212ENST00000463875 CERKQ8TCT0 537 aa12.55□□□□□ -0.4
GTDC1-212ENST00000463875 IGF1RP08069 1367 aa12.51□□□□□ -0.41
GTDC1-212ENST00000463875 CD109Q6YHK3 1445 aa12.51□□□□□ -0.41
GTDC1-212ENST00000463875 KIF21BO75037 1637 aa12.51□□□□□ -0.41
GTDC1-212ENST00000463875 WDR7Q9Y4E6 1490 aa12.5□□□□□ -0.41
GTDC1-212ENST00000463875 ADAMTSL3P82987 1691 aa12.5□□□□□ -0.41
GTDC1-212ENST00000463875 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
GTDC1-212ENST00000463875 ARAP3Q8WWN8 1544 aa12.47□□□□□ -0.41
GTDC1-212ENST00000463875 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
GTDC1-212ENST00000463875 PHLDB1Q86UU1 1377 aa12.45□□□□□ -0.42
GTDC1-212ENST00000463875 IQGAP2Q13576 1575 aa12.45□□□□□ -0.42
GTDC1-212ENST00000463875 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
GTDC1-212ENST00000463875 DISP1Q96F81 1524 aa12.43□□□□□ -0.42
GTDC1-212ENST00000463875 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
GTDC1-212ENST00000463875 CARMIL1Q5VZK9 1371 aa12.42□□□□□ -0.42
GTDC1-212ENST00000463875 BCORL1Q5H9F3 1711 aa12.4□□□□□ -0.42
GTDC1-212ENST00000463875 HSPA2P54652 639 aa12.39□□□□□ -0.43
GTDC1-212ENST00000463875 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
GTDC1-212ENST00000463875 MADDQ8WXG6 1647 aa12.38□□□□□ -0.43
GTDC1-212ENST00000463875 ARID4BQ4LE39 1312 aaPredicted RBP12.38□□□□□ -0.43
GTDC1-212ENST00000463875 UGGT2Q9NYU1 1516 aa12.37□□□□□ -0.43
GTDC1-212ENST00000463875 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
GTDC1-212ENST00000463875 FOXD1Q16676 465 aa12.34□□□□□ -0.43
GTDC1-212ENST00000463875 KIAA0556O60303 1618 aa12.33□□□□□ -0.43
GTDC1-212ENST00000463875 NEO1Q92859 1461 aa12.32□□□□□ -0.44
GTDC1-212ENST00000463875 RAPGEF3O95398 923 aa12.31□□□□□ -0.44
GTDC1-212ENST00000463875 POGZQ7Z3K3 1410 aa12.31□□□□□ -0.44
GTDC1-212ENST00000463875 RIMS1Q86UR5 1692 aaKnown RBP12.31□□□□□ -0.44
GTDC1-212ENST00000463875 YEATS2Q9ULM3 1422 aa12.29□□□□□ -0.44
GTDC1-212ENST00000463875 ABCA8O94911 1581 aa12.27□□□□□ -0.44
GTDC1-212ENST00000463875 GOLGA3Q08378 1498 aa12.26□□□□□ -0.45
GTDC1-212ENST00000463875 IQSEC2Q5JU85 1478 aa12.26□□□□□ -0.45
GTDC1-212ENST00000463875 FAM9AQ8IZU1 332 aaPredicted RBP12.26□□□□□ -0.45
GTDC1-212ENST00000463875 FANCAO15360 1455 aa12.25□□□□□ -0.45
GTDC1-212ENST00000463875 ABCA9Q8IUA7 1624 aa12.25□□□□□ -0.45
GTDC1-212ENST00000463875 ARHGEF40Q8TER5 1519 aa12.24□□□□□ -0.45
GTDC1-212ENST00000463875 FRMPD1Q5SYB0 1578 aa12.24□□□□□ -0.45
GTDC1-212ENST00000463875 RAPGEF2Q9Y4G8 1499 aa12.23□□□□□ -0.45
GTDC1-212ENST00000463875 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
GTDC1-212ENST00000463875 SUPT5HO00267 1087 aaKnown RBP12.22□□□□□ -0.45
GTDC1-212ENST00000463875 PTPRTO14522 1441 aa12.21□□□□□ -0.45
GTDC1-212ENST00000463875 TTC37Q6PGP7 1564 aa12.21□□□□□ -0.46
GTDC1-212ENST00000463875 PLPPR3Q6T4P5 718 aa12.21□□□□□ -0.46
GTDC1-212ENST00000463875 FHOD3Q2V2M9 1422 aa12.2□□□□□ -0.46
GTDC1-212ENST00000463875 DENND4BO75064 1496 aaPredicted RBP12.2□□□□□ -0.46
GTDC1-212ENST00000463875 PREX1Q8TCU6 1659 aa12.19□□□□□ -0.46
GTDC1-212ENST00000463875 ATP10BO94823 1461 aa12.18□□□□□ -0.46
GTDC1-212ENST00000463875 MAGI2Q86UL8 1455 aa12.18□□□□□ -0.46
GTDC1-212ENST00000463875 STRCQ7RTU9 1775 aa12.17□□□□□ -0.46
GTDC1-212ENST00000463875 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
GTDC1-212ENST00000463875 LTBP4Q8N2S1 1624 aa12.15□□□□□ -0.46
GTDC1-212ENST00000463875 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
GTDC1-212ENST00000463875 FER1L4A9Z1Z3 1794 aa12.15□□□□□ -0.46
GTDC1-212ENST00000463875 UHRF1BP1Q6BDS2 1440 aa12.15□□□□□ -0.46
GTDC1-212ENST00000463875 RICTORQ6R327 1708 aa12.14□□□□□ -0.47
GTDC1-212ENST00000463875 ZFYVE16Q7Z3T8 1539 aa12.14□□□□□ -0.47
GTDC1-212ENST00000463875 SETD1BQ9UPS6 1966 aaKnown RBP12.12□□□□□ -0.47
GTDC1-212ENST00000463875 ARHGEF12Q9NZN5 1544 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms