RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 TONSLQ96HA7 1378 aa24.01■■□□□ 1.43
TCF3-204ENST00000453954 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
TCF3-204ENST00000453954 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
TCF3-204ENST00000453954 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
TCF3-204ENST00000453954 CHIC2Q9UKJ5 165 aa23.97■■□□□ 1.43
TCF3-204ENST00000453954 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
TCF3-204ENST00000453954 NPM2Q86SE8 214 aaKnown RBP23.91■■□□□ 1.42
TCF3-204ENST00000453954 ZNF326Q5BKZ1 582 aaKnown RBP23.89■■□□□ 1.42
TCF3-204ENST00000453954 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
TCF3-204ENST00000453954 ARAP1Q96P48 1450 aa23.86■■□□□ 1.41
TCF3-204ENST00000453954 DEKP35659 375 aaKnown RBP23.84■■□□□ 1.41
TCF3-204ENST00000453954 MRS2Q9HD23 443 aa23.84■■□□□ 1.41
TCF3-204ENST00000453954 SALL2Q9Y467 1007 aaPredicted RBP23.83■■□□□ 1.41
TCF3-204ENST00000453954 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.4
TCF3-204ENST00000453954 RRP7BPQ9NSQ0 103 aa23.83■■□□□ 1.4
TCF3-204ENST00000453954 RTN4Q9NQC3 1192 aaKnown RBP23.82■■□□□ 1.4
TCF3-204ENST00000453954 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
TCF3-204ENST00000453954 RTL5Q5HYW3 569 aaPredicted RBP23.78■■□□□ 1.4
TCF3-204ENST00000453954 CCER2I3L3R5 266 aa23.77■■□□□ 1.4
TCF3-204ENST00000453954 FOXD1Q16676 465 aa23.75■■□□□ 1.39
TCF3-204ENST00000453954 CCDC184Q52MB2 194 aa23.74■■□□□ 1.39
TCF3-204ENST00000453954 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
TCF3-204ENST00000453954 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
TCF3-204ENST00000453954 PPP4R2Q9NY27 417 aa23.68■■□□□ 1.38
TCF3-204ENST00000453954 PHLDB1Q86UU1 1377 aa23.68■■□□□ 1.38
TCF3-204ENST00000453954 HSPA5P11021 654 aaKnown RBP23.67■■□□□ 1.38
TCF3-204ENST00000453954 CCDC136Q96JN2 1154 aa23.67■■□□□ 1.38
TCF3-204ENST00000453954 RRBP1Q9P2E9 1410 aaKnown RBP23.64■■□□□ 1.37
TCF3-204ENST00000453954 ANP32AP39687 249 aaKnown RBP23.62■■□□□ 1.37
TCF3-204ENST00000453954 PAK3O75914 559 aaPredicted RBP23.61■■□□□ 1.37
TCF3-204ENST00000453954 NOP58Q9Y2X3 529 aaKnown RBP23.61■■□□□ 1.37
TCF3-204ENST00000453954 EIF4G2P78344 907 aaKnown RBP eCLIP23.59■■□□□ 1.373e-7■■■■■ 49.2
TCF3-204ENST00000453954 LAS1LQ9Y4W2 734 aaKnown RBP23.58■■□□□ 1.37
TCF3-204ENST00000453954 ZBTB47Q9UFB7 747 aaPredicted RBP23.55■■□□□ 1.36
TCF3-204ENST00000453954 ARHGAP35Q9NRY4 1499 aa23.55■■□□□ 1.36
TCF3-204ENST00000453954 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
TCF3-204ENST00000453954 CUX2O14529 1486 aa23.54■■□□□ 1.36
TCF3-204ENST00000453954 FANCIQ9NVI1 1328 aa23.53■■□□□ 1.36
TCF3-204ENST00000453954 MAPKBP1O60336 1514 aa23.53■■□□□ 1.36
TCF3-204ENST00000453954 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
TCF3-204ENST00000453954 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
TCF3-204ENST00000453954 WASHC2AQ641Q2 1341 aa23.47■■□□□ 1.35
TCF3-204ENST00000453954 PRXQ9BXM0 1461 aa23.46■■□□□ 1.35
TCF3-204ENST00000453954 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.45■■□□□ 1.34
TCF3-204ENST00000453954 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
TCF3-204ENST00000453954 ANO8Q9HCE9 1232 aaPredicted RBP23.43■■□□□ 1.34
TCF3-204ENST00000453954 L3MBTL2Q969R5 705 aa23.4■■□□□ 1.34
TCF3-204ENST00000453954 TIMELESSQ9UNS1 1208 aa23.4■■□□□ 1.34
TCF3-204ENST00000453954 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
TCF3-204ENST00000453954 TMC1Q8TDI8 760 aa23.37■■□□□ 1.33
TCF3-204ENST00000453954 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
TCF3-204ENST00000453954 EIF5BO60841 1220 aaKnown RBP23.36■■□□□ 1.33
TCF3-204ENST00000453954 LRRC9Q6ZRR7 1453 aa23.34■■□□□ 1.33
TCF3-204ENST00000453954 ZNF777Q9ULD5 760 aaPredicted RBP23.34■■□□□ 1.33
TCF3-204ENST00000453954 KDM2AQ9Y2K7 1162 aa23.34■■□□□ 1.33
TCF3-204ENST00000453954 IGF1RP08069 1367 aa23.32■■□□□ 1.32
TCF3-204ENST00000453954 IL27Q8NEV9 243 aa23.32■■□□□ 1.32
TCF3-204ENST00000453954 NEFMP07197 916 aa23.31■■□□□ 1.32
TCF3-204ENST00000453954 DAXXQ9UER7 740 aaPredicted RBP23.31■■□□□ 1.32
TCF3-204ENST00000453954 SLC4A1APQ9BWU0 796 aaKnown RBP23.29■■□□□ 1.32
TCF3-204ENST00000453954 AKNAQ7Z591 1439 aa23.28■■□□□ 1.32
TCF3-204ENST00000453954 CCDC18Q5T9S5 1454 aa23.27■■□□□ 1.32
TCF3-204ENST00000453954 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
TCF3-204ENST00000453954 MYT1LQ9UL68 1186 aa23.25■■□□□ 1.31
TCF3-204ENST00000453954 SKAP1Q86WV1 359 aa23.24■■□□□ 1.31
TCF3-204ENST00000453954 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
TCF3-204ENST00000453954 CUX1P39880 1505 aa23.24■■□□□ 1.31
TCF3-204ENST00000453954 IPO9Q96P70 1041 aaKnown RBP23.24■■□□□ 1.31
TCF3-204ENST00000453954 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
TCF3-204ENST00000453954 MPHOSPH9Q99550 1183 aa23.22■■□□□ 1.31
TCF3-204ENST00000453954 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
TCF3-204ENST00000453954 ARXQ96QS3 562 aa23.2■■□□□ 1.3
TCF3-204ENST00000453954 PRKCSHP14314 528 aaPredicted RBP23.2■■□□□ 1.3
TCF3-204ENST00000453954 TIAM1Q13009 1591 aa23.19■■□□□ 1.3
TCF3-204ENST00000453954 ZBED9Q6R2W3 1325 aa23.16■■□□□ 1.3
TCF3-204ENST00000453954 NBPF8Q3BBV2 869 aa23.16■■□□□ 1.3
TCF3-204ENST00000453954 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
TCF3-204ENST00000453954 EXOC6Q8TAG9 804 aa23.14■■□□□ 1.3
TCF3-204ENST00000453954 PLIN1O60240 522 aa23.14■■□□□ 1.29
TCF3-204ENST00000453954 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
TCF3-204ENST00000453954 KIF7Q2M1P5 1343 aa23.12■■□□□ 1.29
TCF3-204ENST00000453954 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
TCF3-204ENST00000453954 ERICH6BQ5W0A0 696 aa23.1■■□□□ 1.29
TCF3-204ENST00000453954 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.292e-6■■■■■ 29.3
TCF3-204ENST00000453954 PTPRKQ15262 1439 aa23.08■■□□□ 1.29
TCF3-204ENST00000453954 CCDC7Q96M83 1385 aa23.08■■□□□ 1.29
TCF3-204ENST00000453954 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
TCF3-204ENST00000453954 FMN1Q68DA7 1419 aa23.06■■□□□ 1.28
TCF3-204ENST00000453954 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
TCF3-204ENST00000453954 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
TCF3-204ENST00000453954 RAD54L2Q9Y4B4 1467 aa23.01■■□□□ 1.27
TCF3-204ENST00000453954 RGL3Q3MIN7 710 aa23.01■■□□□ 1.27
TCF3-204ENST00000453954 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
TCF3-204ENST00000453954 ZNF644Q9H582 1327 aaPredicted RBP23■■□□□ 1.27
TCF3-204ENST00000453954 CC2D1BQ5T0F9 858 aaKnown RBP23■■□□□ 1.27
TCF3-204ENST00000453954 PDE4AP27815 886 aa22.99■■□□□ 1.27
TCF3-204ENST00000453954 FGD5Q6ZNL6 1462 aa22.99■■□□□ 1.27
TCF3-204ENST00000453954 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
TCF3-204ENST00000453954 RGS3P49796 1198 aa22.99■■□□□ 1.27
TCF3-204ENST00000453954 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms