RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
CTNNB1-210ENST00000453024 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.11■■□□□ 1.29
CTNNB1-210ENST00000453024 MAPKBP1O60336 1514 aa23.11■■□□□ 1.29
CTNNB1-210ENST00000453024 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
CTNNB1-210ENST00000453024 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.29
CTNNB1-210ENST00000453024 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
CTNNB1-210ENST00000453024 BAZ1BQ9UIG0 1483 aaKnown RBP23.06■■□□□ 1.28
CTNNB1-210ENST00000453024 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
CTNNB1-210ENST00000453024 RTL5Q5HYW3 569 aaPredicted RBP23.02■■□□□ 1.28
CTNNB1-210ENST00000453024 B4GALNT3Q6L9W6 998 aa23.01■■□□□ 1.27
CTNNB1-210ENST00000453024 SIN3AQ96ST3 1273 aa23■■□□□ 1.27
CTNNB1-210ENST00000453024 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
CTNNB1-210ENST00000453024 CCNB3Q8WWL7 1395 aa22.96■■□□□ 1.27
CTNNB1-210ENST00000453024 IPO9Q96P70 1041 aaKnown RBP22.9■■□□□ 1.26
CTNNB1-210ENST00000453024 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
CTNNB1-210ENST00000453024 SYNJ1O43426 1573 aa22.86■■□□□ 1.25
CTNNB1-210ENST00000453024 ZBTB47Q9UFB7 747 aaPredicted RBP22.85■■□□□ 1.25
CTNNB1-210ENST00000453024 ANP32AP39687 249 aaKnown RBP22.84■■□□□ 1.25
CTNNB1-210ENST00000453024 WASHC2AQ641Q2 1341 aa22.82■■□□□ 1.24
CTNNB1-210ENST00000453024 SETD5Q9C0A6 1442 aa22.79■■□□□ 1.24
CTNNB1-210ENST00000453024 TIMELESSQ9UNS1 1208 aa22.78■■□□□ 1.24
CTNNB1-210ENST00000453024 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
CTNNB1-210ENST00000453024 C11orf95C9JLR9 678 aaPredicted RBP22.72■■□□□ 1.23
CTNNB1-210ENST00000453024 EIF5BO60841 1220 aaKnown RBP22.7■■□□□ 1.22
CTNNB1-210ENST00000453024 WASHC2CQ9Y4E1 1318 aa22.68■■□□□ 1.22
CTNNB1-210ENST00000453024 CCDC184Q52MB2 194 aa22.67■■□□□ 1.22
CTNNB1-210ENST00000453024 NEFMP07197 916 aa22.66■■□□□ 1.22
CTNNB1-210ENST00000453024 BRPF3Q9ULD4 1205 aa22.64■■□□□ 1.22
CTNNB1-210ENST00000453024 LAS1LQ9Y4W2 734 aaKnown RBP22.64■■□□□ 1.21
CTNNB1-210ENST00000453024 USP35Q9P2H5 1018 aa22.6■■□□□ 1.21
CTNNB1-210ENST00000453024 FAM9BQ8IZU0 186 aa22.58■■□□□ 1.21
CTNNB1-210ENST00000453024 ZBED9Q6R2W3 1325 aa22.58■■□□□ 1.21
CTNNB1-210ENST00000453024 ERICH3Q5RHP9 1530 aa22.56■■□□□ 1.2
CTNNB1-210ENST00000453024 TONSLQ96HA7 1378 aa22.55■■□□□ 1.2
CTNNB1-210ENST00000453024 NPM2Q86SE8 214 aaKnown RBP22.54■■□□□ 1.2
CTNNB1-210ENST00000453024 PRXQ9BXM0 1461 aa22.53■■□□□ 1.2
CTNNB1-210ENST00000453024 NCAPD3P42695 1498 aa22.52■■□□□ 1.2
CTNNB1-210ENST00000453024 PKNOX2Q96KN3 472 aa22.52■■□□□ 1.2
CTNNB1-210ENST00000453024 FAM50AQ14320 339 aaKnown RBP22.52■■□□□ 1.2
CTNNB1-210ENST00000453024 AKNAQ7Z591 1439 aa22.5■■□□□ 1.19
CTNNB1-210ENST00000453024 PEG3Q9GZU2 1588 aa22.47■■□□□ 1.19
CTNNB1-210ENST00000453024 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
CTNNB1-210ENST00000453024 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
CTNNB1-210ENST00000453024 MRS2Q9HD23 443 aa22.46■■□□□ 1.19
CTNNB1-210ENST00000453024 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
CTNNB1-210ENST00000453024 PPM1GO15355 546 aaPredicted RBP22.44■■□□□ 1.18
CTNNB1-210ENST00000453024 GSE1Q14687 1217 aa22.44■■□□□ 1.18
CTNNB1-210ENST00000453024 PRKRIP1Q9H875 184 aaPredicted RBP22.41■■□□□ 1.18
CTNNB1-210ENST00000453024 RNF123Q5XPI4 1314 aa22.4■■□□□ 1.18
CTNNB1-210ENST00000453024 HSPA5P11021 654 aaKnown RBP22.4■■□□□ 1.18
CTNNB1-210ENST00000453024 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
CTNNB1-210ENST00000453024 TIAM1Q13009 1591 aa22.39■■□□□ 1.18
CTNNB1-210ENST00000453024 CNTLNQ9NXG0 1405 aa22.39■■□□□ 1.17
CTNNB1-210ENST00000453024 RSPH6AQ9H0K4 717 aa22.37■■□□□ 1.17
CTNNB1-210ENST00000453024 NCOA2Q15596 1464 aa22.36■■□□□ 1.17
CTNNB1-210ENST00000453024 TOP2BQ02880 1626 aa22.34■■□□□ 1.17
CTNNB1-210ENST00000453024 LRRC9Q6ZRR7 1453 aa22.34■■□□□ 1.17
CTNNB1-210ENST00000453024 FRAT1Q92837 279 aaPredicted RBP22.34■■□□□ 1.17
CTNNB1-210ENST00000453024 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
CTNNB1-210ENST00000453024 PDE4AP27815 886 aa22.33■■□□□ 1.17
CTNNB1-210ENST00000453024 KDM5BQ9UGL1 1544 aa22.33■■□□□ 1.16
CTNNB1-210ENST00000453024 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
CTNNB1-210ENST00000453024 TCERG1O14776 1098 aaKnown RBP22.28■■□□□ 1.16
CTNNB1-210ENST00000453024 NFKBIBQ15653 356 aa22.28■■□□□ 1.16
CTNNB1-210ENST00000453024 BACH2Q9BYV9 841 aa22.28■■□□□ 1.16
CTNNB1-210ENST00000453024 FAM43AQ8N2R8 423 aa22.25■■□□□ 1.15
CTNNB1-210ENST00000453024 EIF4G2P78344 907 aaKnown RBP eCLIP22.24■■□□□ 1.15
CTNNB1-210ENST00000453024 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
CTNNB1-210ENST00000453024 SENP3-EIF4A1A0A087X0R7 540 aa22.21■■□□□ 1.15
CTNNB1-210ENST00000453024 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
CTNNB1-210ENST00000453024 UACAQ9BZF9 1416 aa22.19■■□□□ 1.14
CTNNB1-210ENST00000453024 BIVM-ERCC5R4GMW8 1640 aa22.19■■□□□ 1.14
CTNNB1-210ENST00000453024 DCAF11Q8TEB1 546 aa22.17■■□□□ 1.14
CTNNB1-210ENST00000453024 NCOA1Q15788 1441 aa22.16■■□□□ 1.14
CTNNB1-210ENST00000453024 MS4A1P11836 297 aa22.16■■□□□ 1.14
CTNNB1-210ENST00000453024 EXOC6Q8TAG9 804 aa22.15■■□□□ 1.14
CTNNB1-210ENST00000453024 DDRGK1Q96HY6 314 aa22.15■■□□□ 1.14
CTNNB1-210ENST00000453024 ZMYND15Q9H091 742 aa22.15■■□□□ 1.14
CTNNB1-210ENST00000453024 GLIPR1L2Q4G1C9 344 aa22.15■■□□□ 1.14
CTNNB1-210ENST00000453024 SLC4A3P48751 1232 aa22.14■■□□□ 1.14
CTNNB1-210ENST00000453024 VSIG10Q8N0Z9 540 aa22.12■■□□□ 1.13
CTNNB1-210ENST00000453024 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.136e-8■■■■■ 37.4
CTNNB1-210ENST00000453024 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
CTNNB1-210ENST00000453024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.1■■□□□ 1.139e-12■■□□□ 14.1
CTNNB1-210ENST00000453024 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
CTNNB1-210ENST00000453024 CFAP43Q8NDM7 1665 aa22.07■■□□□ 1.12
CTNNB1-210ENST00000453024 RRP1P56182 461 aaKnown RBP22.07■■□□□ 1.12
CTNNB1-210ENST00000453024 HFM1A2PYH4 1435 aa22.06■■□□□ 1.12
CTNNB1-210ENST00000453024 ATP1B4Q9UN42 357 aaPredicted RBP22.06■■□□□ 1.12
CTNNB1-210ENST00000453024 PTPRKQ15262 1439 aa22.05■■□□□ 1.12
CTNNB1-210ENST00000453024 PTPN23Q9H3S7 1636 aa22.05■■□□□ 1.12
CTNNB1-210ENST00000453024 FRAT2O75474 233 aaPredicted RBP22.04■■□□□ 1.12
CTNNB1-210ENST00000453024 SKAP1Q86WV1 359 aa22.04■■□□□ 1.12
CTNNB1-210ENST00000453024 KIF7Q2M1P5 1343 aa22.04■■□□□ 1.12
CTNNB1-210ENST00000453024 RRAGDQ9NQL2 400 aaPredicted RBP22.03■■□□□ 1.12
CTNNB1-210ENST00000453024 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
CTNNB1-210ENST00000453024 DAXXQ9UER7 740 aaPredicted RBP21.99■■□□□ 1.11
CTNNB1-210ENST00000453024 NAIPQ13075 1403 aa21.99■■□□□ 1.11
CTNNB1-210ENST00000453024 FGD6Q6ZV73 1430 aa21.98■■□□□ 1.11
CTNNB1-210ENST00000453024 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms