RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 SHROOM2Q13796 1616 aa24.18■■□□□ 1.46
TRAPPC12-211ENST00000452495 FAM9AQ8IZU1 332 aaPredicted RBP24.15■■□□□ 1.46
TRAPPC12-211ENST00000452495 KIAA0586Q9BVV6 1533 aa24.14■■□□□ 1.45
TRAPPC12-211ENST00000452495 IQGAP2Q13576 1575 aa24.13■■□□□ 1.45
TRAPPC12-211ENST00000452495 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
TRAPPC12-211ENST00000452495 GOLGA3Q08378 1498 aa24.07■■□□□ 1.44
TRAPPC12-211ENST00000452495 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
TRAPPC12-211ENST00000452495 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
TRAPPC12-211ENST00000452495 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
TRAPPC12-211ENST00000452495 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
TRAPPC12-211ENST00000452495 UGGT2Q9NYU1 1516 aa23.98■■□□□ 1.43
TRAPPC12-211ENST00000452495 PHF23Q9BUL5 403 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC12-211ENST00000452495 ERCC6L2Q5T890 1561 aa23.94■■□□□ 1.42
TRAPPC12-211ENST00000452495 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC12-211ENST00000452495 JPH4Q96JJ6 628 aa23.92■■□□□ 1.42
TRAPPC12-211ENST00000452495 KIAA0556O60303 1618 aa23.9■■□□□ 1.42
TRAPPC12-211ENST00000452495 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
TRAPPC12-211ENST00000452495 SAMD9Q5K651 1589 aa23.86■■□□□ 1.41
TRAPPC12-211ENST00000452495 CARMIL2Q6F5E8 1435 aa23.86■■□□□ 1.41
TRAPPC12-211ENST00000452495 DISP1Q96F81 1524 aa23.86■■□□□ 1.41
TRAPPC12-211ENST00000452495 EFCAB5A4FU69 1503 aa23.83■■□□□ 1.41
TRAPPC12-211ENST00000452495 UBTFP17480 764 aaKnown RBP23.81■■□□□ 1.4
TRAPPC12-211ENST00000452495 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
TRAPPC12-211ENST00000452495 TNIKQ9UKE5 1360 aa23.76■■□□□ 1.39
TRAPPC12-211ENST00000452495 PTPRGP23470 1445 aa23.67■■□□□ 1.38
TRAPPC12-211ENST00000452495 ARHGAP35Q9NRY4 1499 aa23.64■■□□□ 1.38
TRAPPC12-211ENST00000452495 ADCY10Q96PN6 1610 aa23.63■■□□□ 1.37
TRAPPC12-211ENST00000452495 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
TRAPPC12-211ENST00000452495 FHOD3Q2V2M9 1422 aa23.6■■□□□ 1.37
TRAPPC12-211ENST00000452495 ABCA8O94911 1581 aa23.59■■□□□ 1.37
TRAPPC12-211ENST00000452495 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
TRAPPC12-211ENST00000452495 CLIP1P30622 1438 aa23.59■■□□□ 1.37
TRAPPC12-211ENST00000452495 UHRF1BP1LA0JNW5 1464 aa23.58■■□□□ 1.37
TRAPPC12-211ENST00000452495 RANGAP1P46060 587 aaPredicted RBP23.58■■□□□ 1.37
TRAPPC12-211ENST00000452495 CEP162Q5TB80 1403 aa23.57■■□□□ 1.36
TRAPPC12-211ENST00000452495 RAPGEF6Q8TEU7 1601 aa23.56■■□□□ 1.36
TRAPPC12-211ENST00000452495 UACAQ9BZF9 1416 aa23.56■■□□□ 1.36
TRAPPC12-211ENST00000452495 LOC105371045A0A1W2PR82 267 aa23.55■■□□□ 1.36
TRAPPC12-211ENST00000452495 P3H3Q8IVL6 736 aa23.53■■□□□ 1.36
TRAPPC12-211ENST00000452495 PLB1Q6P1J6 1458 aa23.52■■□□□ 1.36
TRAPPC12-211ENST00000452495 FMN1Q68DA7 1419 aa23.51■■□□□ 1.35
TRAPPC12-211ENST00000452495 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
TRAPPC12-211ENST00000452495 ZCCHC11Q5TAX3 1644 aaKnown RBP23.48■■□□□ 1.35
TRAPPC12-211ENST00000452495 HECW1Q76N89 1606 aa23.46■■□□□ 1.35
TRAPPC12-211ENST00000452495 KDM5BQ9UGL1 1544 aa23.45■■□□□ 1.34
TRAPPC12-211ENST00000452495 PCF11O94913 1555 aaKnown RBP23.44■■□□□ 1.34
TRAPPC12-211ENST00000452495 MAPKBP1O60336 1514 aa23.43■■□□□ 1.34
TRAPPC12-211ENST00000452495 NUP153P49790 1475 aaKnown RBP23.4■■□□□ 1.34
TRAPPC12-211ENST00000452495 FYCO1Q9BQS8 1478 aa23.37■■□□□ 1.33
TRAPPC12-211ENST00000452495 LRRIQ1Q96JM4 1722 aa23.37■■□□□ 1.33
TRAPPC12-211ENST00000452495 CASKIN1Q8WXD9 1431 aa23.35■■□□□ 1.33
TRAPPC12-211ENST00000452495 NPM1P06748 294 aaKnown RBP eCLIP23.35■■□□□ 1.33
TRAPPC12-211ENST00000452495 ATP10BO94823 1461 aa23.3■■□□□ 1.32
TRAPPC12-211ENST00000452495 KIF13AQ9H1H9 1805 aa23.29■■□□□ 1.32
TRAPPC12-211ENST00000452495 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
TRAPPC12-211ENST00000452495 CCDC18Q5T9S5 1454 aa23.29■■□□□ 1.32
TRAPPC12-211ENST00000452495 EPRSP07814 1512 aaKnown RBP23.28■■□□□ 1.32
TRAPPC12-211ENST00000452495 ASXL2Q76L83 1435 aa23.26■■□□□ 1.31
TRAPPC12-211ENST00000452495 CDK13Q14004 1512 aaKnown RBP23.26■■□□□ 1.31
TRAPPC12-211ENST00000452495 DIP2BQ9P265 1576 aa23.26■■□□□ 1.31
TRAPPC12-211ENST00000452495 WDR7Q9Y4E6 1490 aa23.25■■□□□ 1.31
TRAPPC12-211ENST00000452495 CFAP43Q8NDM7 1665 aa23.23■■□□□ 1.31
TRAPPC12-211ENST00000452495 ABCC10Q5T3U5 1492 aa23.21■■□□□ 1.31
TRAPPC12-211ENST00000452495 GLI2P10070 1586 aa23.19■■□□□ 1.3
TRAPPC12-211ENST00000452495 ARID3CA6NKF2 412 aa23.17■■□□□ 1.3
TRAPPC12-211ENST00000452495 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC12-211ENST00000452495 MAP3K4Q9Y6R4 1608 aa23.13■■□□□ 1.29
TRAPPC12-211ENST00000452495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC12-211ENST00000452495 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
TRAPPC12-211ENST00000452495 TIAM1Q13009 1591 aa23.13■■□□□ 1.29
TRAPPC12-211ENST00000452495 ABCA9Q8IUA7 1624 aa23.11■■□□□ 1.29
TRAPPC12-211ENST00000452495 MAP3K1Q13233 1512 aa23.11■■□□□ 1.29
TRAPPC12-211ENST00000452495 KIF14Q15058 1648 aa23.11■■□□□ 1.29
TRAPPC12-211ENST00000452495 CDK11AQ9UQ88 783 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC12-211ENST00000452495 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC12-211ENST00000452495 MAGI3Q5TCQ9 1506 aa23.08■■□□□ 1.28
TRAPPC12-211ENST00000452495 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.28
TRAPPC12-211ENST00000452495 PLEKHD1A6NEE1 506 aa23.07■■□□□ 1.28
TRAPPC12-211ENST00000452495 TSPOAP1O95153 1857 aa23.06■■□□□ 1.28
TRAPPC12-211ENST00000452495 TRHP20396 242 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC12-211ENST00000452495 PPRC1Q5VV67 1664 aaKnown RBP23.03■■□□□ 1.28
TRAPPC12-211ENST00000452495 TTC37Q6PGP7 1564 aa23.03■■□□□ 1.28
TRAPPC12-211ENST00000452495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.28
TRAPPC12-211ENST00000452495 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.28
TRAPPC12-211ENST00000452495 FAM69CQ0P6D2 419 aa23.02■■□□□ 1.28
TRAPPC12-211ENST00000452495 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
TRAPPC12-211ENST00000452495 KCNH8Q96L42 1107 aa22.97■■□□□ 1.27
TRAPPC12-211ENST00000452495 MTUS2Q5JR59 1369 aa22.97■■□□□ 1.27
TRAPPC12-211ENST00000452495 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
TRAPPC12-211ENST00000452495 TEX14Q8IWB6 1497 aa22.95■■□□□ 1.26
TRAPPC12-211ENST00000452495 CFAP74Q9C0B2 1584 aa22.95■■□□□ 1.26
TRAPPC12-211ENST00000452495 CDC42BPAQ5VT25 1732 aa22.94■■□□□ 1.26
TRAPPC12-211ENST00000452495 PREX2Q70Z35 1606 aa22.93■■□□□ 1.26
TRAPPC12-211ENST00000452495 ARAP3Q8WWN8 1544 aa22.93■■□□□ 1.26
TRAPPC12-211ENST00000452495 CD109Q6YHK3 1445 aa22.93■■□□□ 1.26
TRAPPC12-211ENST00000452495 ITSN2Q9NZM3 1697 aa22.93■■□□□ 1.26
TRAPPC12-211ENST00000452495 APLP2Q06481 763 aa22.91■■□□□ 1.26
TRAPPC12-211ENST00000452495 CDC42BPBQ9Y5S2 1711 aa22.89■■□□□ 1.26
TRAPPC12-211ENST00000452495 NCOA2Q15596 1464 aa22.84■■□□□ 1.25
TRAPPC12-211ENST00000452495 PLCH2O75038 1416 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms