RNA–Protein interactions for RNA: ENST00000447399.6

SWAP70-202, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 2 BASIC

Gene SWAP70, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-202ENST00000447399 ARHGAP35Q9NRY4 1499 aa24.46■■□□□ 1.51
SWAP70-202ENST00000447399 MAPKBP1O60336 1514 aa24.46■■□□□ 1.51
SWAP70-202ENST00000447399 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
SWAP70-202ENST00000447399 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
SWAP70-202ENST00000447399 PEG3Q9GZU2 1588 aa24.41■■□□□ 1.5
SWAP70-202ENST00000447399 ERICH3Q5RHP9 1530 aa24.41■■□□□ 1.5
SWAP70-202ENST00000447399 HNRNPUQ00839 825 aaKnown RBP eCLIP24.4■■□□□ 1.5
SWAP70-202ENST00000447399 PHLDB1Q86UU1 1377 aa24.38■■□□□ 1.49
SWAP70-202ENST00000447399 ERICH6Q7L0X2 663 aa24.38■■□□□ 1.49
SWAP70-202ENST00000447399 MSH5O43196 834 aa24.36■■□□□ 1.49
SWAP70-202ENST00000447399 CUX2O14529 1486 aa24.36■■□□□ 1.49
SWAP70-202ENST00000447399 CUX1P39880 1505 aa24.31■■□□□ 1.48
SWAP70-202ENST00000447399 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
SWAP70-202ENST00000447399 CCER2I3L3R5 266 aa24.28■■□□□ 1.48
SWAP70-202ENST00000447399 CNGB1Q14028 1251 aaPredicted RBP24.28■■□□□ 1.48
SWAP70-202ENST00000447399 CDK11AQ9UQ88 783 aaPredicted RBP24.27■■□□□ 1.48
SWAP70-202ENST00000447399 BIVM-ERCC5R4GMW8 1640 aa24.23■■□□□ 1.47
SWAP70-202ENST00000447399 LRRC9Q6ZRR7 1453 aa24.2■■□□□ 1.46
SWAP70-202ENST00000447399 IGF1RP08069 1367 aa24.19■■□□□ 1.46
SWAP70-202ENST00000447399 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
SWAP70-202ENST00000447399 TIAM1Q13009 1591 aa24.17■■□□□ 1.46
SWAP70-202ENST00000447399 FAM9BQ8IZU0 186 aa24.14■■□□□ 1.45
SWAP70-202ENST00000447399 SENP3-EIF4A1A0A087X0R7 540 aa24.13■■□□□ 1.45
SWAP70-202ENST00000447399 FHOD3Q2V2M9 1422 aa24.1■■□□□ 1.45
SWAP70-202ENST00000447399 B4GALNT3Q6L9W6 998 aa24.1■■□□□ 1.45
SWAP70-202ENST00000447399 TIMELESSQ9UNS1 1208 aa24.1■■□□□ 1.45
SWAP70-202ENST00000447399 CHIC2Q9UKJ5 165 aa24.09■■□□□ 1.45
SWAP70-202ENST00000447399 CCDC184Q52MB2 194 aa24.09■■□□□ 1.45
SWAP70-202ENST00000447399 RRP7BPQ9NSQ0 103 aa24.05■■□□□ 1.44
SWAP70-202ENST00000447399 HSPA5P11021 654 aaKnown RBP24.02■■□□□ 1.44
SWAP70-202ENST00000447399 NBR1Q14596 966 aa24■■□□□ 1.43
SWAP70-202ENST00000447399 FHAD1B1AJZ9 1412 aa23.99■■□□□ 1.43
SWAP70-202ENST00000447399 WASHC2AQ641Q2 1341 aa23.97■■□□□ 1.43
SWAP70-202ENST00000447399 ARID3CA6NKF2 412 aa23.97■■□□□ 1.43
SWAP70-202ENST00000447399 POLR3GLQ9BT43 218 aa23.97■■□□□ 1.43
SWAP70-202ENST00000447399 FANCIQ9NVI1 1328 aa23.96■■□□□ 1.43
SWAP70-202ENST00000447399 FOXD1Q16676 465 aa23.96■■□□□ 1.43
SWAP70-202ENST00000447399 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.43
SWAP70-202ENST00000447399 MRS2Q9HD23 443 aa23.95■■□□□ 1.42
SWAP70-202ENST00000447399 PCF11O94913 1555 aaKnown RBP23.95■■□□□ 1.42
SWAP70-202ENST00000447399 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
SWAP70-202ENST00000447399 PPP4R2Q9NY27 417 aa23.93■■□□□ 1.42
SWAP70-202ENST00000447399 CFTRP13569 1480 aa23.92■■□□□ 1.42
SWAP70-202ENST00000447399 PTPRKQ15262 1439 aa23.89■■□□□ 1.41
SWAP70-202ENST00000447399 FGD5Q6ZNL6 1462 aa23.89■■□□□ 1.41
SWAP70-202ENST00000447399 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
SWAP70-202ENST00000447399 MAP3K1Q13233 1512 aa23.87■■□□□ 1.41
SWAP70-202ENST00000447399 DEKP35659 375 aaKnown RBP23.87■■□□□ 1.41
SWAP70-202ENST00000447399 FGD6Q6ZV73 1430 aa23.86■■□□□ 1.41
SWAP70-202ENST00000447399 NCAPD3P42695 1498 aa23.86■■□□□ 1.41
SWAP70-202ENST00000447399 C11orf95C9JLR9 678 aaPredicted RBP23.85■■□□□ 1.41
SWAP70-202ENST00000447399 AQRO60306 1485 aaKnown RBP eCLIP23.85■■□□□ 1.41
SWAP70-202ENST00000447399 UACAQ9BZF9 1416 aa23.81■■□□□ 1.4
SWAP70-202ENST00000447399 L3MBTL2Q969R5 705 aa23.79■■□□□ 1.4
SWAP70-202ENST00000447399 PAK3O75914 559 aaPredicted RBP23.78■■□□□ 1.4
SWAP70-202ENST00000447399 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
SWAP70-202ENST00000447399 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
SWAP70-202ENST00000447399 ZNF326Q5BKZ1 582 aaKnown RBP23.76■■□□□ 1.39
SWAP70-202ENST00000447399 NAIPQ13075 1403 aa23.73■■□□□ 1.39
SWAP70-202ENST00000447399 HFM1A2PYH4 1435 aa23.73■■□□□ 1.39
SWAP70-202ENST00000447399 NOP58Q9Y2X3 529 aaKnown RBP23.73■■□□□ 1.39
SWAP70-202ENST00000447399 CASKIN1Q8WXD9 1431 aa23.72■■□□□ 1.39
SWAP70-202ENST00000447399 HMGXB3Q12766 1538 aa23.72■■□□□ 1.39
SWAP70-202ENST00000447399 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
SWAP70-202ENST00000447399 CFAP43Q8NDM7 1665 aa23.71■■□□□ 1.39
SWAP70-202ENST00000447399 FYCO1Q9BQS8 1478 aa23.7■■□□□ 1.38
SWAP70-202ENST00000447399 CCDC136Q96JN2 1154 aa23.69■■□□□ 1.38
SWAP70-202ENST00000447399 MPHOSPH9Q99550 1183 aa23.68■■□□□ 1.38
SWAP70-202ENST00000447399 FMN1Q68DA7 1419 aa23.68■■□□□ 1.38
SWAP70-202ENST00000447399 PTPN23Q9H3S7 1636 aa23.66■■□□□ 1.38
SWAP70-202ENST00000447399 NPM2Q86SE8 214 aaKnown RBP23.66■■□□□ 1.38
SWAP70-202ENST00000447399 CNTLNQ9NXG0 1405 aa23.65■■□□□ 1.38
SWAP70-202ENST00000447399 AKNAQ7Z591 1439 aa23.64■■□□□ 1.38
SWAP70-202ENST00000447399 NBPF8Q3BBV2 869 aa23.64■■□□□ 1.38
SWAP70-202ENST00000447399 ERICH6BQ5W0A0 696 aa23.64■■□□□ 1.37
SWAP70-202ENST00000447399 ZBED9Q6R2W3 1325 aa23.64■■□□□ 1.37
SWAP70-202ENST00000447399 NCOA2Q15596 1464 aa23.63■■□□□ 1.37
SWAP70-202ENST00000447399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.63■■□□□ 1.37
SWAP70-202ENST00000447399 CCDC7Q96M83 1385 aa23.62■■□□□ 1.37
SWAP70-202ENST00000447399 SALL2Q9Y467 1007 aaPredicted RBP23.62■■□□□ 1.37
SWAP70-202ENST00000447399 MYOM3Q5VTT5 1437 aa23.6■■□□□ 1.37
SWAP70-202ENST00000447399 ANP32AP39687 249 aaKnown RBP23.59■■□□□ 1.37
SWAP70-202ENST00000447399 KIF7Q2M1P5 1343 aa23.58■■□□□ 1.37
SWAP70-202ENST00000447399 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
SWAP70-202ENST00000447399 KDM5BQ9UGL1 1544 aa23.57■■□□□ 1.36
SWAP70-202ENST00000447399 RTL5Q5HYW3 569 aaPredicted RBP23.56■■□□□ 1.36
SWAP70-202ENST00000447399 SLC4A1APQ9BWU0 796 aaKnown RBP23.54■■□□□ 1.36
SWAP70-202ENST00000447399 ZBTB47Q9UFB7 747 aaPredicted RBP23.54■■□□□ 1.36
SWAP70-202ENST00000447399 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
SWAP70-202ENST00000447399 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
SWAP70-202ENST00000447399 RTN4Q9NQC3 1192 aaKnown RBP23.5■■□□□ 1.35
SWAP70-202ENST00000447399 SNAPC4Q5SXM2 1469 aa23.48■■□□□ 1.35
SWAP70-202ENST00000447399 EFCAB5A4FU69 1503 aa23.47■■□□□ 1.35
SWAP70-202ENST00000447399 NUDCQ9Y266 331 aa23.46■■□□□ 1.35
SWAP70-202ENST00000447399 NCOA1Q15788 1441 aa23.46■■□□□ 1.35
SWAP70-202ENST00000447399 IPO9Q96P70 1041 aaKnown RBP23.46■■□□□ 1.35
SWAP70-202ENST00000447399 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
SWAP70-202ENST00000447399 TMC1Q8TDI8 760 aa23.46■■□□□ 1.35
SWAP70-202ENST00000447399 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
SWAP70-202ENST00000447399 DENND4BO75064 1496 aaPredicted RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms