RNA–Protein interactions for RNA: ENST00000447399.6

SWAP70-202, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 2 BASIC

Gene SWAP70, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-202ENST00000447399 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
SWAP70-202ENST00000447399 SHROOM4Q9ULL8 1493 aa30.08■■■□□ 2.41
SWAP70-202ENST00000447399 SUPT5HO00267 1087 aaKnown RBP29.84■■■□□ 2.37
SWAP70-202ENST00000447399 HRCP23327 699 aa29.06■■■□□ 2.24
SWAP70-202ENST00000447399 PCGF6Q9BYE7 350 aa29.03■■■□□ 2.24
SWAP70-202ENST00000447399 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
SWAP70-202ENST00000447399 PPARGC1BQ86YN6 1023 aaKnown RBP28.87■■■□□ 2.21
SWAP70-202ENST00000447399 MYO15BQ96JP2 1530 aa28.83■■■□□ 2.21
SWAP70-202ENST00000447399 CHIC1Q5VXU3 224 aa28.83■■■□□ 2.21
SWAP70-202ENST00000447399 LOC105371045A0A1W2PR82 267 aa28.43■■■□□ 2.14
SWAP70-202ENST00000447399 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
SWAP70-202ENST00000447399 EHMT2Q96KQ7 1210 aa27.88■■■□□ 2.05
SWAP70-202ENST00000447399 TRIM26Q12899 539 aaPredicted RBP27.88■■■□□ 2.05
SWAP70-202ENST00000447399 DCAF1Q9Y4B6 1507 aa27.8■■■□□ 2.04
SWAP70-202ENST00000447399 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
SWAP70-202ENST00000447399 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
SWAP70-202ENST00000447399 TRIM41Q8WV44 630 aa27.44■■□□□ 1.98
SWAP70-202ENST00000447399 SCAF1Q9H7N4 1312 aaKnown RBP27.38■■□□□ 1.97
SWAP70-202ENST00000447399 ZEB1P37275 1124 aaPredicted RBP27.37■■□□□ 1.97
SWAP70-202ENST00000447399 PELP1Q8IZL8 1130 aaKnown RBP27.17■■□□□ 1.94
SWAP70-202ENST00000447399 TTBK1Q5TCY1 1321 aaPredicted RBP27.07■■□□□ 1.92
SWAP70-202ENST00000447399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.07■■□□□ 1.92
SWAP70-202ENST00000447399 CCER1Q8TC90 406 aaPredicted RBP26.96■■□□□ 1.91
SWAP70-202ENST00000447399 RSF1Q96T23 1441 aaPredicted RBP26.92■■□□□ 1.9
SWAP70-202ENST00000447399 NEUROD1Q13562 356 aa26.85■■□□□ 1.89
SWAP70-202ENST00000447399 SCRIBQ14160 1630 aa26.8■■□□□ 1.88
SWAP70-202ENST00000447399 ABCC9O60706 1549 aa26.79■■□□□ 1.88
SWAP70-202ENST00000447399 ACIN1Q9UKV3 1341 aaKnown RBP26.77■■□□□ 1.88
SWAP70-202ENST00000447399 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
SWAP70-202ENST00000447399 GTF3C3Q9Y5Q9 886 aa26.72■■□□□ 1.87
SWAP70-202ENST00000447399 DIEXFQ68CQ4 756 aaKnown RBP26.66■■□□□ 1.86
SWAP70-202ENST00000447399 YTHDC1Q96MU7 727 aaKnown RBP26.55■■□□□ 1.84
SWAP70-202ENST00000447399 CENPBP07199 599 aaPredicted RBP26.54■■□□□ 1.84
SWAP70-202ENST00000447399 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
SWAP70-202ENST00000447399 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
SWAP70-202ENST00000447399 UBTFP17480 764 aaKnown RBP26.21■■□□□ 1.79
SWAP70-202ENST00000447399 ZNF316A6NFI3 1004 aaPredicted RBP26.14■■□□□ 1.78
SWAP70-202ENST00000447399 HNRNPUL2Q1KMD3 747 aaKnown RBP26.14■■□□□ 1.78
SWAP70-202ENST00000447399 WIZO95785 1651 aa26.13■■□□□ 1.77
SWAP70-202ENST00000447399 MIER1Q8N108 512 aa26.06■■□□□ 1.76
SWAP70-202ENST00000447399 RANGAP1P46060 587 aaPredicted RBP26.04■■□□□ 1.76
SWAP70-202ENST00000447399 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
SWAP70-202ENST00000447399 ABCC8Q09428 1581 aa26■■□□□ 1.75
SWAP70-202ENST00000447399 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
SWAP70-202ENST00000447399 SOGA1O94964 1423 aa25.94■■□□□ 1.74
SWAP70-202ENST00000447399 CSRNP3Q8WYN3 585 aa25.87■■□□□ 1.73
SWAP70-202ENST00000447399 MYT1Q01538 1121 aa25.86■■□□□ 1.73
SWAP70-202ENST00000447399 RUSC2Q8N2Y8 1516 aa25.8■■□□□ 1.72
SWAP70-202ENST00000447399 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
SWAP70-202ENST00000447399 TNIKQ9UKE5 1360 aa25.74■■□□□ 1.71
SWAP70-202ENST00000447399 APLP2Q06481 763 aa25.68■■□□□ 1.7
SWAP70-202ENST00000447399 BAZ1AQ9NRL2 1556 aaPredicted RBP25.68■■□□□ 1.7
SWAP70-202ENST00000447399 NACADO15069 1562 aa25.61■■□□□ 1.69
SWAP70-202ENST00000447399 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.69
SWAP70-202ENST00000447399 GOLGA3Q08378 1498 aa25.48■■□□□ 1.67
SWAP70-202ENST00000447399 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.67
SWAP70-202ENST00000447399 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
SWAP70-202ENST00000447399 CLIP1P30622 1438 aa25.42■■□□□ 1.66
SWAP70-202ENST00000447399 SMARCA2P51531 1590 aa25.42■■□□□ 1.66
SWAP70-202ENST00000447399 SUPT16HQ9Y5B9 1047 aaKnown RBP25.39■■□□□ 1.65
SWAP70-202ENST00000447399 ITGAEP38570 1179 aa25.38■■□□□ 1.65
SWAP70-202ENST00000447399 EEA1Q15075 1411 aa25.36■■□□□ 1.65
SWAP70-202ENST00000447399 BCANQ96GW7 911 aa25.33■■□□□ 1.64
SWAP70-202ENST00000447399 SMARCA4P51532 1647 aa25.28■■□□□ 1.64
SWAP70-202ENST00000447399 KCNH8Q96L42 1107 aa25.24■■□□□ 1.63
SWAP70-202ENST00000447399 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
SWAP70-202ENST00000447399 VPS8Q8N3P4 1428 aa25.22■■□□□ 1.63
SWAP70-202ENST00000447399 RAPGEF2Q9Y4G8 1499 aa25.18■■□□□ 1.62
SWAP70-202ENST00000447399 KANK4Q5T7N3 995 aaPredicted RBP25.16■■□□□ 1.62
SWAP70-202ENST00000447399 TSHZ2Q9NRE2 1034 aa25.16■■□□□ 1.62
SWAP70-202ENST00000447399 DHX57Q6P158 1386 aaKnown RBP25.13■■□□□ 1.61
SWAP70-202ENST00000447399 SYNJ1O43426 1573 aa25.07■■□□□ 1.6
SWAP70-202ENST00000447399 FKBP8Q14318 412 aa25■■□□□ 1.59
SWAP70-202ENST00000447399 KIF21BO75037 1637 aa24.99■■□□□ 1.59
SWAP70-202ENST00000447399 HIRIP3Q9BW71 556 aaPredicted RBP24.98■■□□□ 1.59
SWAP70-202ENST00000447399 DDX10Q13206 875 aaKnown RBP24.97■■□□□ 1.59
SWAP70-202ENST00000447399 ANP32EQ9BTT0 268 aa24.95■■□□□ 1.59
SWAP70-202ENST00000447399 CLSPNQ9HAW4 1339 aa24.93■■□□□ 1.58
SWAP70-202ENST00000447399 TRIM52Q96A61 297 aa24.87■■□□□ 1.57
SWAP70-202ENST00000447399 SIN3AQ96ST3 1273 aa24.84■■□□□ 1.57
SWAP70-202ENST00000447399 ATP1B4Q9UN42 357 aaPredicted RBP24.83■■□□□ 1.57
SWAP70-202ENST00000447399 BAZ1BQ9UIG0 1483 aaKnown RBP24.82■■□□□ 1.56
SWAP70-202ENST00000447399 FAM50AQ14320 339 aaKnown RBP24.77■■□□□ 1.56
SWAP70-202ENST00000447399 UNC13AQ9UPW8 1703 aa24.77■■□□□ 1.56
SWAP70-202ENST00000447399 NEFLP07196 543 aa24.77■■□□□ 1.56
SWAP70-202ENST00000447399 CCNB3Q8WWL7 1395 aa24.75■■□□□ 1.55
SWAP70-202ENST00000447399 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
SWAP70-202ENST00000447399 RAB3GAP2Q9H2M9 1393 aa24.71■■□□□ 1.55
SWAP70-202ENST00000447399 BCL11AQ9H165 835 aa24.69■■□□□ 1.54
SWAP70-202ENST00000447399 P3H3Q8IVL6 736 aa24.67■■□□□ 1.54
SWAP70-202ENST00000447399 RBM19Q9Y4C8 960 aaKnown RBP24.65■■□□□ 1.54
SWAP70-202ENST00000447399 ATAD2BQ9ULI0 1458 aa24.62■■□□□ 1.53
SWAP70-202ENST00000447399 IRX6P78412 446 aaPredicted RBP24.62■■□□□ 1.53
SWAP70-202ENST00000447399 RRBP1Q9P2E9 1410 aaKnown RBP24.6■■□□□ 1.53
SWAP70-202ENST00000447399 ANP32CO43423 234 aa24.57■■□□□ 1.52
SWAP70-202ENST00000447399 PRXQ9BXM0 1461 aa24.54■■□□□ 1.52
SWAP70-202ENST00000447399 BICRAQ9NZM4 1560 aa24.52■■□□□ 1.52
SWAP70-202ENST00000447399 WDR97A6NE52 1622 aa24.49■■□□□ 1.51
SWAP70-202ENST00000447399 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
SWAP70-202ENST00000447399 PPP1R15AO75807 674 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms