RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
R3HDM1-211ENST00000445855 TAOK2Q9UL54 1235 aa9.61□□□□□ -0.87
R3HDM1-211ENST00000445855 RASEFQ8IZ41 740 aa9.59□□□□□ -0.87
R3HDM1-211ENST00000445855 HS6ST3Q8IZP7 471 aa9.59□□□□□ -0.87
R3HDM1-211ENST00000445855 VSIG10Q8N0Z9 540 aa9.59□□□□□ -0.87
R3HDM1-211ENST00000445855 RIOK3O14730 519 aaKnown RBP9.58□□□□□ -0.88
R3HDM1-211ENST00000445855 CHRM1P11229 460 aaPredicted RBP9.58□□□□□ -0.88
R3HDM1-211ENST00000445855 SPRYD3Q8NCJ5 442 aa9.58□□□□□ -0.88
R3HDM1-211ENST00000445855 CFAP44Q96MT7 982 aa9.58□□□□□ -0.88
R3HDM1-211ENST00000445855 DNAJC5Q9H3Z4 198 aa9.55□□□□□ -0.88
R3HDM1-211ENST00000445855 VGFO15240 615 aaPredicted RBP9.52□□□□□ -0.89
R3HDM1-211ENST00000445855 CHADLQ6NUI6 762 aa9.52□□□□□ -0.89
R3HDM1-211ENST00000445855 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
R3HDM1-211ENST00000445855 SGIP1Q9BQI5 828 aa9.49□□□□□ -0.89
R3HDM1-211ENST00000445855 PYGBP11216 843 aa9.47□□□□□ -0.89
R3HDM1-211ENST00000445855 STK25O00506 426 aa9.46□□□□□ -0.9
R3HDM1-211ENST00000445855 PRKAR2AP13861 404 aaKnown RBP9.46□□□□□ -0.9
R3HDM1-211ENST00000445855 FXR2P51116 673 aaKnown RBP eCLIP9.46□□□□□ -0.9
R3HDM1-211ENST00000445855 KDM2AQ9Y2K7 1162 aa9.44□□□□□ -0.9
R3HDM1-211ENST00000445855 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
R3HDM1-211ENST00000445855 TSHZ2Q9NRE2 1034 aa9.43□□□□□ -0.9
R3HDM1-211ENST00000445855 NKX1-1Q15270 411 aaPredicted RBP9.42□□□□□ -0.9
R3HDM1-211ENST00000445855 BCANQ96GW7 911 aa9.42□□□□□ -0.9
R3HDM1-211ENST00000445855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.41□□□□□ -0.9
R3HDM1-211ENST00000445855 ZNF467Q7Z7K2 595 aaPredicted RBP9.41□□□□□ -0.9
R3HDM1-211ENST00000445855 ZFP91Q96JP5 570 aaPredicted RBP9.41□□□□□ -0.9
R3HDM1-211ENST00000445855 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
R3HDM1-211ENST00000445855 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.9
R3HDM1-211ENST00000445855 STK24Q9Y6E0 443 aa9.4□□□□□ -0.9
R3HDM1-211ENST00000445855 RYDENQ9NUL5 291 aaKnown RBP9.38□□□□□ -0.91
R3HDM1-211ENST00000445855 GTPBP6O43824 516 aaPredicted RBP9.37□□□□□ -0.91
R3HDM1-211ENST00000445855 CCDC61Q9Y6R9 512 aa9.37□□□□□ -0.91
R3HDM1-211ENST00000445855 PAK3O75914 559 aaPredicted RBP9.36□□□□□ -0.91
R3HDM1-211ENST00000445855 POTEHQ6S545 545 aa9.35□□□□□ -0.91
R3HDM1-211ENST00000445855 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
R3HDM1-211ENST00000445855 PDAP1Q13442 181 aaKnown RBP9.34□□□□□ -0.91
R3HDM1-211ENST00000445855 ZNF579Q8NAF0 562 aaKnown RBP9.32□□□□□ -0.92
R3HDM1-211ENST00000445855 PCDHB8Q9UN66 801 aa9.29□□□□□ -0.92
R3HDM1-211ENST00000445855 PCDHB13Q9Y5F0 798 aa9.29□□□□□ -0.92
R3HDM1-211ENST00000445855 PSEN1P49768 467 aa9.27□□□□□ -0.93
R3HDM1-211ENST00000445855 KIF12Q96FN5 646 aa9.25□□□□□ -0.93
R3HDM1-211ENST00000445855 IFNL1Q8IU54 200 aa9.24□□□□□ -0.93
R3HDM1-211ENST00000445855 MAP3K13O43283 966 aa9.23□□□□□ -0.93
R3HDM1-211ENST00000445855 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
R3HDM1-211ENST00000445855 ZRANB1Q9UGI0 708 aa9.21□□□□□ -0.94
R3HDM1-211ENST00000445855 NBR1Q14596 966 aa9.17□□□□□ -0.94
R3HDM1-211ENST00000445855 MFRPQ9BY79 579 aa9.17□□□□□ -0.94
R3HDM1-211ENST00000445855 SOX12O15370 315 aa9.15□□□□□ -0.94
R3HDM1-211ENST00000445855 PHF12Q96QT6 1004 aa9.15□□□□□ -0.94
R3HDM1-211ENST00000445855 CABP2Q9NPB3 220 aa9.14□□□□□ -0.95
R3HDM1-211ENST00000445855 NLRP6P59044 892 aa9.13□□□□□ -0.95
R3HDM1-211ENST00000445855 EFCAB3Q8N7B9 438 aa9.13□□□□□ -0.95
R3HDM1-211ENST00000445855 C19orf67A6NJJ6 358 aa9.12□□□□□ -0.95
R3HDM1-211ENST00000445855 FBXO22Q8NEZ5 403 aa9.11□□□□□ -0.95
R3HDM1-211ENST00000445855 P3H3Q8IVL6 736 aa9.09□□□□□ -0.95
R3HDM1-211ENST00000445855 PRKCSHP14314 528 aaPredicted RBP9.08□□□□□ -0.96
R3HDM1-211ENST00000445855 TPRNQ4KMQ1 711 aa9.08□□□□□ -0.96
R3HDM1-211ENST00000445855 CADPS2Q86UW7 1296 aa9.08□□□□□ -0.96
R3HDM1-211ENST00000445855 PHF8Q9UPP1 1060 aa9.08□□□□□ -0.96
R3HDM1-211ENST00000445855 WDR70Q9NW82 654 aa9.07□□□□□ -0.96
R3HDM1-211ENST00000445855 MS4A3Q96HJ5 214 aa9.06□□□□□ -0.96
R3HDM1-211ENST00000445855 TMEM106CQ9BVX2 250 aa9.06□□□□□ -0.96
R3HDM1-211ENST00000445855 PPP1R37O75864 691 aa9.05□□□□□ -0.96
R3HDM1-211ENST00000445855 GOLGA2Q08379 1002 aa9.05□□□□□ -0.96
R3HDM1-211ENST00000445855 TIE1P35590 1138 aa9.03□□□□□ -0.96
R3HDM1-211ENST00000445855 TRPC6Q9Y210 931 aa9.02□□□□□ -0.97
R3HDM1-211ENST00000445855 MKRN3Q13064 507 aaKnown RBP9□□□□□ -0.97
R3HDM1-211ENST00000445855 MS4A4AQ96JQ5 239 aa9□□□□□ -0.97
R3HDM1-211ENST00000445855 CLCN6P51797 869 aa8.99□□□□□ -0.97
R3HDM1-211ENST00000445855 KCNV2Q8TDN2 545 aa8.99□□□□□ -0.97
R3HDM1-211ENST00000445855 TTLL13PA6NNM8 815 aa8.97□□□□□ -0.97
R3HDM1-211ENST00000445855 BMP2KQ9NSY1 1161 aaPredicted RBP8.95□□□□□ -0.98
R3HDM1-211ENST00000445855 HAX1O00165 279 aa8.94□□□□□ -0.98
R3HDM1-211ENST00000445855 ILDR1Q86SU0 546 aaPredicted RBP8.94□□□□□ -0.98
R3HDM1-211ENST00000445855 PDE4AP27815 886 aa8.93□□□□□ -0.98
R3HDM1-211ENST00000445855 E2F4Q16254 413 aa8.93□□□□□ -0.98
R3HDM1-211ENST00000445855 NCKAP5LQ9HCH0 1330 aa8.92□□□□□ -0.98
R3HDM1-211ENST00000445855 GALR2O43603 387 aaPredicted RBP8.92□□□□□ -0.98
R3HDM1-211ENST00000445855 ARHGEF1Q92888 912 aaKnown RBP8.92□□□□□ -0.98
R3HDM1-211ENST00000445855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.92□□□□□ -0.98
R3HDM1-211ENST00000445855 MFSD10Q14728 455 aa8.91□□□□□ -0.98
R3HDM1-211ENST00000445855 CRISPLD2Q9H0B8 497 aa8.91□□□□□ -0.98
R3HDM1-211ENST00000445855 TRIM35Q9UPQ4 493 aa8.91□□□□□ -0.98
R3HDM1-211ENST00000445855 LARP6Q9BRS8 491 aaKnown RBP8.89□□□□□ -0.99
R3HDM1-211ENST00000445855 DDX27Q96GQ7 796 aaKnown RBP8.87□□□□□ -0.99
R3HDM1-211ENST00000445855 EVX2Q03828 476 aa8.86□□□□□ -0.99
R3HDM1-211ENST00000445855 TULP1O00294 542 aaPredicted RBP8.85□□□□□ -0.99
R3HDM1-211ENST00000445855 ATN1P54259 1190 aaPredicted RBP8.83□□□□□ -1
R3HDM1-211ENST00000445855 IER5LQ5T953 404 aa8.83□□□□□ -1
R3HDM1-211ENST00000445855 ASTLQ6HA08 431 aaPredicted RBP8.83□□□□□ -1
R3HDM1-211ENST00000445855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.83□□□□□ -1
R3HDM1-211ENST00000445855 ARIH1Q9Y4X5 557 aaPredicted RBP8.83□□□□□ -1
R3HDM1-211ENST00000445855 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
R3HDM1-211ENST00000445855 CAMK2BQ13554 666 aa8.82□□□□□ -1
R3HDM1-211ENST00000445855 LMOD2Q6P5Q4 547 aa8.82□□□□□ -1
R3HDM1-211ENST00000445855 PDCD7Q8N8D1 485 aaKnown RBP8.81□□□□□ -1
R3HDM1-211ENST00000445855 GPHNQ9NQX3 736 aaPredicted RBP8.81□□□□□ -1
R3HDM1-211ENST00000445855 IRX5P78411 483 aaPredicted RBP8.8□□□□□ -1
R3HDM1-211ENST00000445855 DPY19L2Q6NUT2 758 aa8.8□□□□□ -1
R3HDM1-211ENST00000445855 MICALL2Q8IY33 904 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms