RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
R3HDM1-211ENST00000445855 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
R3HDM1-211ENST00000445855 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
R3HDM1-211ENST00000445855 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
R3HDM1-211ENST00000445855 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
R3HDM1-211ENST00000445855 FOXD1Q16676 465 aa13.84□□□□□ -0.19
R3HDM1-211ENST00000445855 ADRA2BP18089 450 aa13.6□□□□□ -0.23
R3HDM1-211ENST00000445855 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
R3HDM1-211ENST00000445855 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
R3HDM1-211ENST00000445855 KCNA4P22459 653 aa12.94□□□□□ -0.34
R3HDM1-211ENST00000445855 PPP4R3CPQ6ZMV5 832 aa12.83□□□□□ -0.36
R3HDM1-211ENST00000445855 MSH5O43196 834 aa12.67□□□□□ -0.38
R3HDM1-211ENST00000445855 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
R3HDM1-211ENST00000445855 SCAF1Q9H7N4 1312 aaKnown RBP12.51□□□□□ -0.41
R3HDM1-211ENST00000445855 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
R3HDM1-211ENST00000445855 NPM3O75607 178 aaKnown RBP12.42□□□□□ -0.42
R3HDM1-211ENST00000445855 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
R3HDM1-211ENST00000445855 SLC4A1APQ9BWU0 796 aaKnown RBP12.41□□□□□ -0.42
R3HDM1-211ENST00000445855 MAPK8IP2Q13387 824 aaPredicted RBP12.21□□□□□ -0.45
R3HDM1-211ENST00000445855 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
R3HDM1-211ENST00000445855 POTEDQ86YR6 584 aa12.14□□□□□ -0.47
R3HDM1-211ENST00000445855 RNF216Q9NWF9 866 aaPredicted RBP12.09□□□□□ -0.47
R3HDM1-211ENST00000445855 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
R3HDM1-211ENST00000445855 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
R3HDM1-211ENST00000445855 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
R3HDM1-211ENST00000445855 ZBTB22O15209 634 aa11.91□□□□□ -0.5
R3HDM1-211ENST00000445855 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
R3HDM1-211ENST00000445855 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
R3HDM1-211ENST00000445855 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
R3HDM1-211ENST00000445855 DCAF8L1A6NGE4 600 aa11.45□□□□□ -0.58
R3HDM1-211ENST00000445855 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
R3HDM1-211ENST00000445855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.35□□□□□ -0.59
R3HDM1-211ENST00000445855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.25□□□□□ -0.61
R3HDM1-211ENST00000445855 HNRNPUL2Q1KMD3 747 aaKnown RBP11.25□□□□□ -0.61
R3HDM1-211ENST00000445855 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.61
R3HDM1-211ENST00000445855 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
R3HDM1-211ENST00000445855 ATF5Q9Y2D1 282 aaPredicted RBP11.1□□□□□ -0.63
R3HDM1-211ENST00000445855 APLP2Q06481 763 aa11.05□□□□□ -0.64
R3HDM1-211ENST00000445855 FKBP8Q14318 412 aa10.96□□□□□ -0.65
R3HDM1-211ENST00000445855 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
R3HDM1-211ENST00000445855 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
R3HDM1-211ENST00000445855 C1QBPQ07021 282 aaKnown RBP10.78□□□□□ -0.68
R3HDM1-211ENST00000445855 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
R3HDM1-211ENST00000445855 TRHP20396 242 aaPredicted RBP10.74□□□□□ -0.69
R3HDM1-211ENST00000445855 CAPN15O75808 1086 aa10.72□□□□□ -0.69
R3HDM1-211ENST00000445855 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
R3HDM1-211ENST00000445855 FBLN2P98095 1184 aa10.67□□□□□ -0.7
R3HDM1-211ENST00000445855 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
R3HDM1-211ENST00000445855 POLA2Q14181 598 aa10.66□□□□□ -0.7
R3HDM1-211ENST00000445855 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
R3HDM1-211ENST00000445855 SPDYE4A6NLX3 237 aa10.61□□□□□ -0.71
R3HDM1-211ENST00000445855 ZBTB12Q9Y330 459 aaPredicted RBP10.58□□□□□ -0.72
R3HDM1-211ENST00000445855 ABCB7O75027 752 aa10.53□□□□□ -0.72
R3HDM1-211ENST00000445855 PROM2Q8N271 834 aa10.52□□□□□ -0.73
R3HDM1-211ENST00000445855 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
R3HDM1-211ENST00000445855 DSG3P32926 999 aa10.46□□□□□ -0.73
R3HDM1-211ENST00000445855 VASPP50552 380 aaPredicted RBP10.34□□□□□ -0.75
R3HDM1-211ENST00000445855 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
R3HDM1-211ENST00000445855 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
R3HDM1-211ENST00000445855 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
R3HDM1-211ENST00000445855 CACNB1Q02641 598 aaPredicted RBP10.3□□□□□ -0.76
R3HDM1-211ENST00000445855 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
R3HDM1-211ENST00000445855 ZNF692Q9BU19 519 aaPredicted RBP10.29□□□□□ -0.76
R3HDM1-211ENST00000445855 SSUH2Q9Y2M2 353 aa10.26□□□□□ -0.77
R3HDM1-211ENST00000445855 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
R3HDM1-211ENST00000445855 IFNLR1Q8IU57 520 aaPredicted RBP10.21□□□□□ -0.77
R3HDM1-211ENST00000445855 STAG3Q9UJ98 1225 aa10.19□□□□□ -0.78
R3HDM1-211ENST00000445855 PABPN1Q86U42 306 aaKnown RBP eCLIP10.16□□□□□ -0.78
R3HDM1-211ENST00000445855 KLHL34Q8N239 644 aa10.06□□□□□ -0.8
R3HDM1-211ENST00000445855 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
R3HDM1-211ENST00000445855 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
R3HDM1-211ENST00000445855 PKD2Q13563 968 aa10.02□□□□□ -0.81
R3HDM1-211ENST00000445855 MIER1Q8N108 512 aa10.02□□□□□ -0.81
R3HDM1-211ENST00000445855 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
R3HDM1-211ENST00000445855 PLEKHG5O94827 1062 aa9.98□□□□□ -0.81
R3HDM1-211ENST00000445855 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
R3HDM1-211ENST00000445855 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
R3HDM1-211ENST00000445855 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
R3HDM1-211ENST00000445855 SPDYE1Q8NFV5 336 aaPredicted RBP9.91□□□□□ -0.82
R3HDM1-211ENST00000445855 ECM2O94769 699 aaPredicted RBP9.89□□□□□ -0.83
R3HDM1-211ENST00000445855 PLCB2Q00722 1185 aa9.86□□□□□ -0.83
R3HDM1-211ENST00000445855 REM2Q8IYK8 340 aaPredicted RBP9.82□□□□□ -0.84
R3HDM1-211ENST00000445855 TRIM41Q8WV44 630 aa9.8□□□□□ -0.84
R3HDM1-211ENST00000445855 CIZ1Q9ULV3 898 aaPredicted RBP9.8□□□□□ -0.84
R3HDM1-211ENST00000445855 CLEC11AQ9Y240 323 aa9.8□□□□□ -0.84
R3HDM1-211ENST00000445855 PRR29P0C7W0 189 aa9.79□□□□□ -0.84
R3HDM1-211ENST00000445855 RGL2O15211 777 aa9.77□□□□□ -0.85
R3HDM1-211ENST00000445855 GSE1Q14687 1217 aa9.75□□□□□ -0.85
R3HDM1-211ENST00000445855 CREBZFQ9NS37 354 aa9.75□□□□□ -0.85
R3HDM1-211ENST00000445855 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
R3HDM1-211ENST00000445855 NUBP1P53384 320 aa9.73□□□□□ -0.85
R3HDM1-211ENST00000445855 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.72□□□□□ -0.85
R3HDM1-211ENST00000445855 PITPNM1O00562 1244 aa9.7□□□□□ -0.86
R3HDM1-211ENST00000445855 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
R3HDM1-211ENST00000445855 MNX1P50219 401 aaPredicted RBP9.69□□□□□ -0.86
R3HDM1-211ENST00000445855 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
R3HDM1-211ENST00000445855 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
R3HDM1-211ENST00000445855 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
R3HDM1-211ENST00000445855 CHGAP10645 457 aaKnown RBP9.63□□□□□ -0.87
R3HDM1-211ENST00000445855 PAXIP1Q6ZW49 1069 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms