RNA–Protein interactions for RNA: ENST00000442738.6

POLR2F-205, Transcript of RNA polymerase II subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2F, Length 2,106 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-205ENST00000442738 CFAP43Q8NDM7 1665 aa31.23■■■□□ 2.59
POLR2F-205ENST00000442738 DIEXFQ68CQ4 756 aaKnown RBP31.21■■■□□ 2.59
POLR2F-205ENST00000442738 LRRC9Q6ZRR7 1453 aa31.2■■■□□ 2.58
POLR2F-205ENST00000442738 AQRO60306 1485 aaKnown RBP eCLIP31.18■■■□□ 2.585e-7■■■■■ 39.8
POLR2F-205ENST00000442738 ZNF316A6NFI3 1004 aaPredicted RBP31.18■■■□□ 2.58
POLR2F-205ENST00000442738 KIF21AQ7Z4S6 1674 aa31.17■■■□□ 2.58
POLR2F-205ENST00000442738 PCF11O94913 1555 aaKnown RBP31.17■■■□□ 2.58
POLR2F-205ENST00000442738 FYCO1Q9BQS8 1478 aa31.15■■■□□ 2.58
POLR2F-205ENST00000442738 DHX57Q6P158 1386 aaKnown RBP31.15■■■□□ 2.58
POLR2F-205ENST00000442738 GAPVD1Q14C86 1478 aa31.13■■■□□ 2.57
POLR2F-205ENST00000442738 CASKIN1Q8WXD9 1431 aa31.09■■■□□ 2.57
POLR2F-205ENST00000442738 FHOD3Q2V2M9 1422 aa31.07■■■□□ 2.56
POLR2F-205ENST00000442738 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
POLR2F-205ENST00000442738 TDRD9Q8NDG6 1382 aaKnown RBP31.05■■■□□ 2.56
POLR2F-205ENST00000442738 DNAJC5BQ9UF47 199 aa31.04■■■□□ 2.56
POLR2F-205ENST00000442738 FMN1Q68DA7 1419 aa31.03■■■□□ 2.56
POLR2F-205ENST00000442738 SAMD9Q5K651 1589 aa31.01■■■□□ 2.56
POLR2F-205ENST00000442738 PHLDB1Q86UU1 1377 aa30.97■■■□□ 2.55
POLR2F-205ENST00000442738 P3H3Q8IVL6 736 aa30.95■■■□□ 2.54
POLR2F-205ENST00000442738 SNAPC4Q5SXM2 1469 aa30.94■■■□□ 2.54
POLR2F-205ENST00000442738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.9■■■□□ 2.549e-6■□□□□ 9.6
POLR2F-205ENST00000442738 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
POLR2F-205ENST00000442738 PBRM1Q86U86 1689 aa30.87■■■□□ 2.53
POLR2F-205ENST00000442738 THOC2Q8NI27 1593 aaKnown RBP30.87■■■□□ 2.53
POLR2F-205ENST00000442738 RAB3GAP2Q9H2M9 1393 aa30.83■■■□□ 2.53
POLR2F-205ENST00000442738 SETD5Q9C0A6 1442 aa30.82■■■□□ 2.52
POLR2F-205ENST00000442738 GRIN2BQ13224 1484 aa30.79■■■□□ 2.52
POLR2F-205ENST00000442738 ADAMTS12P58397 1594 aa30.77■■■□□ 2.52
POLR2F-205ENST00000442738 ITGAEP38570 1179 aa30.77■■■□□ 2.52
POLR2F-205ENST00000442738 ATP1B4Q9UN42 357 aaPredicted RBP30.77■■■□□ 2.52
POLR2F-205ENST00000442738 LRRIQ1Q96JM4 1722 aa30.72■■■□□ 2.51
POLR2F-205ENST00000442738 WDR62O43379 1518 aa30.71■■■□□ 2.51
POLR2F-205ENST00000442738 MAPKBP1O60336 1514 aa30.71■■■□□ 2.51
POLR2F-205ENST00000442738 ACIN1Q9UKV3 1341 aaKnown RBP30.7■■■□□ 2.51
POLR2F-205ENST00000442738 IFT140Q96RY7 1462 aa30.7■■■□□ 2.5
POLR2F-205ENST00000442738 FAM50AQ14320 339 aaKnown RBP30.7■■■□□ 2.5
POLR2F-205ENST00000442738 CENPBP07199 599 aaPredicted RBP30.69■■■□□ 2.5
POLR2F-205ENST00000442738 SCAF1Q9H7N4 1312 aaKnown RBP30.69■■■□□ 2.5
POLR2F-205ENST00000442738 FGD6Q6ZV73 1430 aa30.69■■■□□ 2.5
POLR2F-205ENST00000442738 IQGAP2Q13576 1575 aa30.68■■■□□ 2.5
POLR2F-205ENST00000442738 MTUS2Q5JR59 1369 aa30.67■■■□□ 2.5
POLR2F-205ENST00000442738 EHBP1L1Q8N3D4 1523 aa30.65■■■□□ 2.5
POLR2F-205ENST00000442738 CCDC18Q5T9S5 1454 aa30.64■■■□□ 2.49
POLR2F-205ENST00000442738 SUPT6HQ7KZ85 1726 aaKnown RBP30.61■■■□□ 2.49
POLR2F-205ENST00000442738 HECW1Q76N89 1606 aa30.58■■■□□ 2.49
POLR2F-205ENST00000442738 NCOA2Q15596 1464 aa30.57■■■□□ 2.48
POLR2F-205ENST00000442738 NEUROD1Q13562 356 aa30.57■■■□□ 2.48
POLR2F-205ENST00000442738 UGGT2Q9NYU1 1516 aa30.56■■■□□ 2.48
POLR2F-205ENST00000442738 MYOM3Q5VTT5 1437 aa30.56■■■□□ 2.48
POLR2F-205ENST00000442738 ARHGEF11O15085 1522 aa30.55■■■□□ 2.48
POLR2F-205ENST00000442738 MIER1Q8N108 512 aa30.52■■■□□ 2.48
POLR2F-205ENST00000442738 ZNF608Q9ULD9 1512 aaPredicted RBP30.49■■■□□ 2.47
POLR2F-205ENST00000442738 TIMELESSQ9UNS1 1208 aa30.47■■■□□ 2.47
POLR2F-205ENST00000442738 HFM1A2PYH4 1435 aa30.47■■■□□ 2.47
POLR2F-205ENST00000442738 MAGI3Q5TCQ9 1506 aa30.44■■■□□ 2.46
POLR2F-205ENST00000442738 KIAA0586Q9BVV6 1533 aa30.44■■■□□ 2.46
POLR2F-205ENST00000442738 EPRSP07814 1512 aaKnown RBP30.43■■■□□ 2.46
POLR2F-205ENST00000442738 PTPN23Q9H3S7 1636 aa30.42■■■□□ 2.46
POLR2F-205ENST00000442738 EIF4G3O43432 1585 aaKnown RBP30.42■■■□□ 2.46
POLR2F-205ENST00000442738 TCOF1Q13428 1488 aaKnown RBP30.4■■■□□ 2.46
POLR2F-205ENST00000442738 PTPRKQ15262 1439 aa30.39■■■□□ 2.45
POLR2F-205ENST00000442738 GRIN2AQ12879 1464 aa30.37■■■□□ 2.45
POLR2F-205ENST00000442738 KIAA0556O60303 1618 aa30.36■■■□□ 2.45
POLR2F-205ENST00000442738 MAGI1Q96QZ7 1491 aaPredicted RBP30.34■■■□□ 2.45
POLR2F-205ENST00000442738 UACAQ9BZF9 1416 aa30.33■■■□□ 2.45
POLR2F-205ENST00000442738 ERCC6Q03468 1493 aa30.33■■■□□ 2.45
POLR2F-205ENST00000442738 DISP1Q96F81 1524 aa30.32■■■□□ 2.44
POLR2F-205ENST00000442738 NAIPQ13075 1403 aa30.31■■■□□ 2.44
POLR2F-205ENST00000442738 MIA2Q96PC5 1412 aa30.31■■■□□ 2.44
POLR2F-205ENST00000442738 AKNAQ7Z591 1439 aa30.27■■■□□ 2.44
POLR2F-205ENST00000442738 CDK13Q14004 1512 aaKnown RBP30.27■■■□□ 2.44
POLR2F-205ENST00000442738 SIN3AQ96ST3 1273 aa30.24■■■□□ 2.43
POLR2F-205ENST00000442738 GCC2Q8IWJ2 1684 aa30.23■■■□□ 2.43
POLR2F-205ENST00000442738 SYNJ2O15056 1496 aa30.22■■■□□ 2.43
POLR2F-205ENST00000442738 RAPGEF6Q8TEU7 1601 aa30.2■■■□□ 2.43
POLR2F-205ENST00000442738 GTF3C3Q9Y5Q9 886 aa30.2■■■□□ 2.42
POLR2F-205ENST00000442738 YTHDC1Q96MU7 727 aaKnown RBP30.17■■■□□ 2.42
POLR2F-205ENST00000442738 NUP153P49790 1475 aaKnown RBP30.16■■■□□ 2.42
POLR2F-205ENST00000442738 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
POLR2F-205ENST00000442738 PPP1R15AO75807 674 aaPredicted RBP30.14■■■□□ 2.42
POLR2F-205ENST00000442738 NUP160Q12769 1436 aa30.1■■■□□ 2.41
POLR2F-205ENST00000442738 CHMP7Q8WUX9 453 aaPredicted RBP30.06■■■□□ 2.4
POLR2F-205ENST00000442738 TONSLQ96HA7 1378 aa30.05■■■□□ 2.4
POLR2F-205ENST00000442738 CDK11AQ9UQ88 783 aaPredicted RBP30.05■■■□□ 2.4
POLR2F-205ENST00000442738 ROCK1Q13464 1354 aa30.03■■■□□ 2.4
POLR2F-205ENST00000442738 DNMT1P26358 1616 aaKnown RBP30.01■■■□□ 2.39
POLR2F-205ENST00000442738 CARMIL2Q6F5E8 1435 aa30■■■□□ 2.39
POLR2F-205ENST00000442738 TROQ12816 1431 aaPredicted RBP29.98■■■□□ 2.39
POLR2F-205ENST00000442738 DAPK1P53355 1430 aa29.97■■■□□ 2.39
POLR2F-205ENST00000442738 RRP7BPQ9NSQ0 103 aa29.97■■■□□ 2.39
POLR2F-205ENST00000442738 ADCY10Q96PN6 1610 aa29.96■■■□□ 2.39
POLR2F-205ENST00000442738 KDM6BO15054 1643 aa29.93■■■□□ 2.38
POLR2F-205ENST00000442738 ITSN2Q9NZM3 1697 aa29.93■■■□□ 2.38
POLR2F-205ENST00000442738 ARID3CA6NKF2 412 aa29.93■■■□□ 2.38
POLR2F-205ENST00000442738 CHIC2Q9UKJ5 165 aa29.93■■■□□ 2.38
POLR2F-205ENST00000442738 DENND4BO75064 1496 aaPredicted RBP29.93■■■□□ 2.38
POLR2F-205ENST00000442738 KDM5BQ9UGL1 1544 aa29.92■■■□□ 2.38
POLR2F-205ENST00000442738 ABCC5O15440 1437 aa29.91■■■□□ 2.38
POLR2F-205ENST00000442738 PLB1Q6P1J6 1458 aa29.91■■■□□ 2.38
POLR2F-205ENST00000442738 JPH4Q96JJ6 628 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms