RNA–Protein interactions for RNA: ENST00000442415.6

RAF1-205, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene RAF1, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-205ENST00000442415 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
RAF1-205ENST00000442415 CLSPNQ9HAW4 1339 aa21.78■■□□□ 1.08
RAF1-205ENST00000442415 PHLDB1Q86UU1 1377 aa21.77■■□□□ 1.08
RAF1-205ENST00000442415 CHIC2Q9UKJ5 165 aa21.76■■□□□ 1.07
RAF1-205ENST00000442415 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
RAF1-205ENST00000442415 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
RAF1-205ENST00000442415 PRKCSHP14314 528 aaPredicted RBP21.74■■□□□ 1.07
RAF1-205ENST00000442415 FKBP8Q14318 412 aa21.74■■□□□ 1.07
RAF1-205ENST00000442415 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
RAF1-205ENST00000442415 CFTRP13569 1480 aa21.73■■□□□ 1.07
RAF1-205ENST00000442415 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
RAF1-205ENST00000442415 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
RAF1-205ENST00000442415 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
RAF1-205ENST00000442415 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
RAF1-205ENST00000442415 SETD5Q9C0A6 1442 aa21.68■■□□□ 1.06
RAF1-205ENST00000442415 RBM19Q9Y4C8 960 aaKnown RBP21.67■■□□□ 1.06
RAF1-205ENST00000442415 RRP7BPQ9NSQ0 103 aa21.65■■□□□ 1.06
RAF1-205ENST00000442415 ANP32CO43423 234 aa21.61■■□□□ 1.05
RAF1-205ENST00000442415 TDRD9Q8NDG6 1382 aaKnown RBP21.6■■□□□ 1.05
RAF1-205ENST00000442415 IRX6P78412 446 aaPredicted RBP21.6■■□□□ 1.05
RAF1-205ENST00000442415 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
RAF1-205ENST00000442415 MTUS2Q5JR59 1369 aa21.58■■□□□ 1.05
RAF1-205ENST00000442415 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
RAF1-205ENST00000442415 LRRC9Q6ZRR7 1453 aa21.57■■□□□ 1.04
RAF1-205ENST00000442415 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
RAF1-205ENST00000442415 NEFLP07196 543 aa21.57■■□□□ 1.04
RAF1-205ENST00000442415 NESP48681 1621 aa21.56■■□□□ 1.04
RAF1-205ENST00000442415 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
RAF1-205ENST00000442415 FOXD1Q16676 465 aa21.54■■□□□ 1.04
RAF1-205ENST00000442415 SENP3-EIF4A1A0A087X0R7 540 aa21.54■■□□□ 1.04
RAF1-205ENST00000442415 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
RAF1-205ENST00000442415 POLR3GLQ9BT43 218 aa21.52■■□□□ 1.04
RAF1-205ENST00000442415 FANCD2Q9BXW9 1451 aa21.51■■□□□ 1.03
RAF1-205ENST00000442415 MAPKBP1O60336 1514 aa21.51■■□□□ 1.03
RAF1-205ENST00000442415 ERICH6Q7L0X2 663 aa21.5■■□□□ 1.03
RAF1-205ENST00000442415 MSH5O43196 834 aa21.5■■□□□ 1.03
RAF1-205ENST00000442415 TIAM1Q13009 1591 aa21.5■■□□□ 1.03
RAF1-205ENST00000442415 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
RAF1-205ENST00000442415 HNRNPUQ00839 825 aaKnown RBP eCLIP21.44■■□□□ 1.02
RAF1-205ENST00000442415 PCF11O94913 1555 aaKnown RBP21.41■■□□□ 1.02
RAF1-205ENST00000442415 ZNF326Q5BKZ1 582 aaKnown RBP21.4■■□□□ 1.02
RAF1-205ENST00000442415 FAM9BQ8IZU0 186 aa21.35■■□□□ 1.01
RAF1-205ENST00000442415 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
RAF1-205ENST00000442415 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
RAF1-205ENST00000442415 PTPRKQ15262 1439 aa21.31■■□□□ 1
RAF1-205ENST00000442415 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
RAF1-205ENST00000442415 FGD6Q6ZV73 1430 aa21.29■■□□□ 1
RAF1-205ENST00000442415 HSPA5P11021 654 aaKnown RBP21.29■■□□□ 1
RAF1-205ENST00000442415 FBLN2P98095 1184 aa21.29■■□□□ 1
RAF1-205ENST00000442415 CCDC18Q5T9S5 1454 aa21.28■■□□□ 1
RAF1-205ENST00000442415 TOPBP1Q92547 1522 aa21.27■■□□□ 1
RAF1-205ENST00000442415 ANO8Q9HCE9 1232 aaPredicted RBP21.27■■□□□ 1
RAF1-205ENST00000442415 DEKP35659 375 aaKnown RBP21.24■□□□□ 0.99
RAF1-205ENST00000442415 CASKIN1Q8WXD9 1431 aa21.24■□□□□ 0.99
RAF1-205ENST00000442415 CCDC184Q52MB2 194 aa21.23■□□□□ 0.99
RAF1-205ENST00000442415 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
RAF1-205ENST00000442415 AQRO60306 1485 aaKnown RBP eCLIP21.21■□□□□ 0.995e-8■■■■■ 32.4
RAF1-205ENST00000442415 L3MBTL2Q969R5 705 aa21.2■□□□□ 0.98
RAF1-205ENST00000442415 ZNF644Q9H582 1327 aaPredicted RBP21.2■□□□□ 0.98
RAF1-205ENST00000442415 TIMELESSQ9UNS1 1208 aa21.18■□□□□ 0.98
RAF1-205ENST00000442415 EIF4G2P78344 907 aaKnown RBP eCLIP21.18■□□□□ 0.98
RAF1-205ENST00000442415 NCOA2Q15596 1464 aa21.17■□□□□ 0.98
RAF1-205ENST00000442415 FYCO1Q9BQS8 1478 aa21.17■□□□□ 0.98
RAF1-205ENST00000442415 CCER2I3L3R5 266 aa21.17■□□□□ 0.98
RAF1-205ENST00000442415 NBR1Q14596 966 aa21.17■□□□□ 0.98
RAF1-205ENST00000442415 MPHOSPH9Q99550 1183 aa21.17■□□□□ 0.98
RAF1-205ENST00000442415 WASHC2AQ641Q2 1341 aa21.15■□□□□ 0.98
RAF1-205ENST00000442415 SLC4A1APQ9BWU0 796 aaKnown RBP21.15■□□□□ 0.98
RAF1-205ENST00000442415 MRS2Q9HD23 443 aa21.15■□□□□ 0.98
RAF1-205ENST00000442415 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
RAF1-205ENST00000442415 CDK11AQ9UQ88 783 aaPredicted RBP21.14■□□□□ 0.97
RAF1-205ENST00000442415 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.97
RAF1-205ENST00000442415 C11orf95C9JLR9 678 aaPredicted RBP21.13■□□□□ 0.97
RAF1-205ENST00000442415 MAP3K1Q13233 1512 aa21.13■□□□□ 0.97
RAF1-205ENST00000442415 NAIPQ13075 1403 aa21.12■□□□□ 0.97
RAF1-205ENST00000442415 DNMBPQ6XZF7 1577 aa21.11■□□□□ 0.97
RAF1-205ENST00000442415 UACAQ9BZF9 1416 aa21.11■□□□□ 0.97
RAF1-205ENST00000442415 MYOM3Q5VTT5 1437 aa21.1■□□□□ 0.97
RAF1-205ENST00000442415 URB2Q14146 1524 aaKnown RBP21.1■□□□□ 0.97
RAF1-205ENST00000442415 CCDC136Q96JN2 1154 aa21.08■□□□□ 0.97
RAF1-205ENST00000442415 HFM1A2PYH4 1435 aa21.06■□□□□ 0.96
RAF1-205ENST00000442415 B4GALNT3Q6L9W6 998 aa21.05■□□□□ 0.96
RAF1-205ENST00000442415 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
RAF1-205ENST00000442415 NBPF8Q3BBV2 869 aa21.04■□□□□ 0.96
RAF1-205ENST00000442415 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
RAF1-205ENST00000442415 FANCIQ9NVI1 1328 aa21.03■□□□□ 0.96
RAF1-205ENST00000442415 CFAP43Q8NDM7 1665 aa21.03■□□□□ 0.96
RAF1-205ENST00000442415 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
RAF1-205ENST00000442415 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
RAF1-205ENST00000442415 CDK13Q14004 1512 aaKnown RBP21.01■□□□□ 0.95
RAF1-205ENST00000442415 RTN4Q9NQC3 1192 aaKnown RBP21.01■□□□□ 0.95
RAF1-205ENST00000442415 EFCAB5A4FU69 1503 aa21■□□□□ 0.95
RAF1-205ENST00000442415 PTPN23Q9H3S7 1636 aa20.98■□□□□ 0.95
RAF1-205ENST00000442415 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
RAF1-205ENST00000442415 CFDP1Q9UEE9 299 aaPredicted RBP20.96■□□□□ 0.95
RAF1-205ENST00000442415 PRKRIP1Q9H875 184 aaPredicted RBP20.93■□□□□ 0.94
RAF1-205ENST00000442415 MAGI3Q5TCQ9 1506 aa20.93■□□□□ 0.94
RAF1-205ENST00000442415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.92■□□□□ 0.943e-7■■■■□ 22
RAF1-205ENST00000442415 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.91■□□□□ 0.94
RAF1-205ENST00000442415 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms