RNA–Protein interactions for RNA: ENST00000441665.1

AP002856.3-201, humanhuman

TSL 3 BASIC

Gene AP002856.3, Length 635 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.3-201ENST00000441665 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
AP002856.3-201ENST00000441665 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
AP002856.3-201ENST00000441665 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
AP002856.3-201ENST00000441665 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
AP002856.3-201ENST00000441665 SOGA1O94964 1423 aa22.28■■□□□ 1.16
AP002856.3-201ENST00000441665 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
AP002856.3-201ENST00000441665 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
AP002856.3-201ENST00000441665 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
AP002856.3-201ENST00000441665 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
AP002856.3-201ENST00000441665 GRIN2BQ13224 1484 aa22.16■■□□□ 1.14
AP002856.3-201ENST00000441665 ABCB7O75027 752 aa22.15■■□□□ 1.14
AP002856.3-201ENST00000441665 SYNJ2O15056 1496 aa22.15■■□□□ 1.14
AP002856.3-201ENST00000441665 CUX1P39880 1505 aa22.14■■□□□ 1.13
AP002856.3-201ENST00000441665 ZNF219Q9P2Y4 722 aaPredicted RBP22.12■■□□□ 1.13
AP002856.3-201ENST00000441665 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
AP002856.3-201ENST00000441665 APLP2Q06481 763 aa22.1■■□□□ 1.13
AP002856.3-201ENST00000441665 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
AP002856.3-201ENST00000441665 ABCA5Q8WWZ7 1642 aa21.99■■□□□ 1.11
AP002856.3-201ENST00000441665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.98■■□□□ 1.11
AP002856.3-201ENST00000441665 HNRNPUL2Q1KMD3 747 aaKnown RBP21.98■■□□□ 1.11
AP002856.3-201ENST00000441665 ABCA10Q8WWZ4 1543 aa21.94■■□□□ 1.1
AP002856.3-201ENST00000441665 ERCC6L2Q5T890 1561 aa21.93■■□□□ 1.1
AP002856.3-201ENST00000441665 GRIN2AQ12879 1464 aa21.89■■□□□ 1.09
AP002856.3-201ENST00000441665 SAMD1Q6SPF0 538 aaPredicted RBP21.86■■□□□ 1.09
AP002856.3-201ENST00000441665 CEP170Q5SW79 1584 aa21.86■■□□□ 1.09
AP002856.3-201ENST00000441665 ADAMTS12P58397 1594 aa21.85■■□□□ 1.09
AP002856.3-201ENST00000441665 NUP160Q12769 1436 aa21.82■■□□□ 1.08
AP002856.3-201ENST00000441665 SHROOM2Q13796 1616 aa21.81■■□□□ 1.08
AP002856.3-201ENST00000441665 KIF13AQ9H1H9 1805 aa21.79■■□□□ 1.08
AP002856.3-201ENST00000441665 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
AP002856.3-201ENST00000441665 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
AP002856.3-201ENST00000441665 BIVM-ERCC5R4GMW8 1640 aa21.7■■□□□ 1.06
AP002856.3-201ENST00000441665 TOP2BQ02880 1626 aa21.68■■□□□ 1.06
AP002856.3-201ENST00000441665 ERICH3Q5RHP9 1530 aa21.66■■□□□ 1.06
AP002856.3-201ENST00000441665 RBM42Q9BTD8 480 aaKnown RBP21.64■■□□□ 1.05
AP002856.3-201ENST00000441665 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
AP002856.3-201ENST00000441665 ABCC10Q5T3U5 1492 aa21.57■■□□□ 1.04
AP002856.3-201ENST00000441665 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
AP002856.3-201ENST00000441665 JPH4Q96JJ6 628 aa21.54■■□□□ 1.04
AP002856.3-201ENST00000441665 MAPKBP1O60336 1514 aa21.54■■□□□ 1.04
AP002856.3-201ENST00000441665 DIP2BQ9P265 1576 aa21.53■■□□□ 1.04
AP002856.3-201ENST00000441665 FAM69CQ0P6D2 419 aa21.53■■□□□ 1.04
AP002856.3-201ENST00000441665 MYCNP04198 464 aaPredicted RBP21.5■■□□□ 1.03
AP002856.3-201ENST00000441665 ADCY10Q96PN6 1610 aa21.5■■□□□ 1.03
AP002856.3-201ENST00000441665 POLA2Q14181 598 aa21.49■■□□□ 1.03
AP002856.3-201ENST00000441665 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
AP002856.3-201ENST00000441665 NPM1P06748 294 aaKnown RBP eCLIP21.48■■□□□ 1.03
AP002856.3-201ENST00000441665 KDM6BO15054 1643 aa21.47■■□□□ 1.03
AP002856.3-201ENST00000441665 CHRDL2Q6WN34 429 aa21.43■■□□□ 1.02
AP002856.3-201ENST00000441665 TSPOAP1O95153 1857 aa21.43■■□□□ 1.02
AP002856.3-201ENST00000441665 KDM4FA0A1W2PPD8 638 aa21.38■■□□□ 1.01
AP002856.3-201ENST00000441665 KIAA0586Q9BVV6 1533 aa21.34■■□□□ 1.01
AP002856.3-201ENST00000441665 CUL7Q14999 1698 aa21.3■■□□□ 1
AP002856.3-201ENST00000441665 IGF1RP08069 1367 aa21.23■□□□□ 0.99
AP002856.3-201ENST00000441665 PTPRGP23470 1445 aa21.22■□□□□ 0.99
AP002856.3-201ENST00000441665 PPRC1Q5VV67 1664 aaKnown RBP21.22■□□□□ 0.99
AP002856.3-201ENST00000441665 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
AP002856.3-201ENST00000441665 ABCC2Q92887 1545 aa21.2■□□□□ 0.98
AP002856.3-201ENST00000441665 ILDR1Q86SU0 546 aaPredicted RBP21.19■□□□□ 0.98
AP002856.3-201ENST00000441665 GLI2P10070 1586 aa21.19■□□□□ 0.98
AP002856.3-201ENST00000441665 PLB1Q6P1J6 1458 aa21.16■□□□□ 0.98
AP002856.3-201ENST00000441665 ASXL2Q76L83 1435 aa21.16■□□□□ 0.98
AP002856.3-201ENST00000441665 TNIKQ9UKE5 1360 aa21.16■□□□□ 0.98
AP002856.3-201ENST00000441665 TTBK1Q5TCY1 1321 aaPredicted RBP21.16■□□□□ 0.98
AP002856.3-201ENST00000441665 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
AP002856.3-201ENST00000441665 CARMIL2Q6F5E8 1435 aa21.14■□□□□ 0.98
AP002856.3-201ENST00000441665 ATF5Q9Y2D1 282 aaPredicted RBP21.13■□□□□ 0.97
AP002856.3-201ENST00000441665 UHRF1BP1LA0JNW5 1464 aa21.11■□□□□ 0.97
AP002856.3-201ENST00000441665 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
AP002856.3-201ENST00000441665 CARMIL1Q5VZK9 1371 aa21.09■□□□□ 0.97
AP002856.3-201ENST00000441665 MAP3K4Q9Y6R4 1608 aa21.07■□□□□ 0.96
AP002856.3-201ENST00000441665 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
AP002856.3-201ENST00000441665 AKT1S1Q96B36 256 aa21.05■□□□□ 0.96
AP002856.3-201ENST00000441665 COL17A1Q9UMD9 1497 aaPredicted RBP21.05■□□□□ 0.96
AP002856.3-201ENST00000441665 EPRSP07814 1512 aaKnown RBP21.04■□□□□ 0.96
AP002856.3-201ENST00000441665 HECW2Q9P2P5 1572 aa21.03■□□□□ 0.96
AP002856.3-201ENST00000441665 DISP1Q96F81 1524 aa21.03■□□□□ 0.96
AP002856.3-201ENST00000441665 TEX14Q8IWB6 1497 aa21.02■□□□□ 0.96
AP002856.3-201ENST00000441665 KDM5BQ9UGL1 1544 aa21.02■□□□□ 0.96
AP002856.3-201ENST00000441665 ZCCHC11Q5TAX3 1644 aaKnown RBP21.01■□□□□ 0.95
AP002856.3-201ENST00000441665 FOXD4L1Q9NU39 408 aa20.99■□□□□ 0.95
AP002856.3-201ENST00000441665 ZBTB12Q9Y330 459 aaPredicted RBP20.96■□□□□ 0.95
AP002856.3-201ENST00000441665 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
AP002856.3-201ENST00000441665 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
AP002856.3-201ENST00000441665 SLC4A1APQ9BWU0 796 aaKnown RBP20.93■□□□□ 0.94
AP002856.3-201ENST00000441665 SP7Q8TDD2 431 aaPredicted RBP20.92■□□□□ 0.94
AP002856.3-201ENST00000441665 WDR7Q9Y4E6 1490 aa20.89■□□□□ 0.94
AP002856.3-201ENST00000441665 REM2Q8IYK8 340 aaPredicted RBP20.88■□□□□ 0.93
AP002856.3-201ENST00000441665 RAPGEF2Q9Y4G8 1499 aa20.87■□□□□ 0.93
AP002856.3-201ENST00000441665 CFAP43Q8NDM7 1665 aa20.85■□□□□ 0.93
AP002856.3-201ENST00000441665 PIP4P2Q8N4L2 257 aa20.82■□□□□ 0.92
AP002856.3-201ENST00000441665 MAGI3Q5TCQ9 1506 aa20.82■□□□□ 0.92
AP002856.3-201ENST00000441665 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
AP002856.3-201ENST00000441665 CD109Q6YHK3 1445 aa20.79■□□□□ 0.92
AP002856.3-201ENST00000441665 KIF21BO75037 1637 aa20.78■□□□□ 0.92
AP002856.3-201ENST00000441665 ABCA8O94911 1581 aa20.76■□□□□ 0.91
AP002856.3-201ENST00000441665 GOLGA3Q08378 1498 aa20.73■□□□□ 0.91
AP002856.3-201ENST00000441665 KCNH8Q96L42 1107 aa20.72■□□□□ 0.91
AP002856.3-201ENST00000441665 PITPNM1O00562 1244 aa20.69■□□□□ 0.9
AP002856.3-201ENST00000441665 ARAP3Q8WWN8 1544 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms