RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
HMGB2-202ENST00000438704 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
HMGB2-202ENST00000438704 LHX8Q68G74 356 aa13.59□□□□□ -0.23
HMGB2-202ENST00000438704 BICRAQ9NZM4 1560 aa13.57□□□□□ -0.24
HMGB2-202ENST00000438704 GALR2O43603 387 aaPredicted RBP13.53□□□□□ -0.24
HMGB2-202ENST00000438704 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
HMGB2-202ENST00000438704 PHF12Q96QT6 1004 aa13.51□□□□□ -0.25
HMGB2-202ENST00000438704 RSF1Q96T23 1441 aaPredicted RBP13.47□□□□□ -0.25
HMGB2-202ENST00000438704 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
HMGB2-202ENST00000438704 SUPT5HO00267 1087 aaKnown RBP13.44□□□□□ -0.26
HMGB2-202ENST00000438704 MIER1Q8N108 512 aa13.43□□□□□ -0.26
HMGB2-202ENST00000438704 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
HMGB2-202ENST00000438704 FKBP8Q14318 412 aa13.39□□□□□ -0.27
HMGB2-202ENST00000438704 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
HMGB2-202ENST00000438704 MROH2BQ7Z745 1585 aa13.38□□□□□ -0.27
HMGB2-202ENST00000438704 TSPYL2Q9H2G4 693 aaPredicted RBP13.38□□□□□ -0.27
HMGB2-202ENST00000438704 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
HMGB2-202ENST00000438704 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
HMGB2-202ENST00000438704 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
HMGB2-202ENST00000438704 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
HMGB2-202ENST00000438704 ASTLQ6HA08 431 aaPredicted RBP13.31□□□□□ -0.28
HMGB2-202ENST00000438704 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
HMGB2-202ENST00000438704 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
HMGB2-202ENST00000438704 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
HMGB2-202ENST00000438704 ATMINO43313 823 aaPredicted RBP13.25□□□□□ -0.29
HMGB2-202ENST00000438704 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
HMGB2-202ENST00000438704 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
HMGB2-202ENST00000438704 WIZO95785 1651 aa13.22□□□□□ -0.29
HMGB2-202ENST00000438704 C7P10643 843 aa13.2□□□□□ -0.3
HMGB2-202ENST00000438704 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
HMGB2-202ENST00000438704 NUBP1P53384 320 aa13.19□□□□□ -0.3
HMGB2-202ENST00000438704 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
HMGB2-202ENST00000438704 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
HMGB2-202ENST00000438704 MAP3K13O43283 966 aa13.18□□□□□ -0.3
HMGB2-202ENST00000438704 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
HMGB2-202ENST00000438704 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
HMGB2-202ENST00000438704 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
HMGB2-202ENST00000438704 TIE1P35590 1138 aa13.16□□□□□ -0.3
HMGB2-202ENST00000438704 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
HMGB2-202ENST00000438704 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
HMGB2-202ENST00000438704 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
HMGB2-202ENST00000438704 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
HMGB2-202ENST00000438704 ATN1P54259 1190 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-202ENST00000438704 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-202ENST00000438704 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
HMGB2-202ENST00000438704 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
HMGB2-202ENST00000438704 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
HMGB2-202ENST00000438704 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
HMGB2-202ENST00000438704 TTLL13PA6NNM8 815 aa13.04□□□□□ -0.32
HMGB2-202ENST00000438704 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
HMGB2-202ENST00000438704 BAZ1BQ9UIG0 1483 aaKnown RBP13.03□□□□□ -0.32
HMGB2-202ENST00000438704 CCDC88BA6NC98 1476 aa13.01□□□□□ -0.33
HMGB2-202ENST00000438704 VASPP50552 380 aaPredicted RBP13□□□□□ -0.33
HMGB2-202ENST00000438704 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
HMGB2-202ENST00000438704 POTEJP0CG39 1038 aa12.98□□□□□ -0.33
HMGB2-202ENST00000438704 IER5LQ5T953 404 aa12.98□□□□□ -0.33
HMGB2-202ENST00000438704 POTEFA5A3E0 1075 aa12.96□□□□□ -0.33
HMGB2-202ENST00000438704 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
HMGB2-202ENST00000438704 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
HMGB2-202ENST00000438704 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
HMGB2-202ENST00000438704 SEC24BO95487 1268 aa12.91□□□□□ -0.34
HMGB2-202ENST00000438704 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
HMGB2-202ENST00000438704 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
HMGB2-202ENST00000438704 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
HMGB2-202ENST00000438704 GSE1Q14687 1217 aa12.89□□□□□ -0.35
HMGB2-202ENST00000438704 PYGBP11216 843 aa12.88□□□□□ -0.35
HMGB2-202ENST00000438704 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
HMGB2-202ENST00000438704 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
HMGB2-202ENST00000438704 POTEMA6NI47 508 aa12.79□□□□□ -0.36
HMGB2-202ENST00000438704 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
HMGB2-202ENST00000438704 PLCG2P16885 1265 aa12.78□□□□□ -0.36
HMGB2-202ENST00000438704 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
HMGB2-202ENST00000438704 CFTRP13569 1480 aa12.78□□□□□ -0.36
HMGB2-202ENST00000438704 IRX5P78411 483 aaPredicted RBP12.77□□□□□ -0.37
HMGB2-202ENST00000438704 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
HMGB2-202ENST00000438704 IFNLR1Q8IU57 520 aaPredicted RBP12.73□□□□□ -0.37
HMGB2-202ENST00000438704 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
HMGB2-202ENST00000438704 OCEL1Q9H607 264 aa12.72□□□□□ -0.37
HMGB2-202ENST00000438704 TRIM41Q8WV44 630 aa12.71□□□□□ -0.37
HMGB2-202ENST00000438704 CADPSQ9ULU8 1353 aa12.7□□□□□ -0.38
HMGB2-202ENST00000438704 LCE2DQ5TA82 110 aaPredicted RBP12.69□□□□□ -0.38
HMGB2-202ENST00000438704 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
HMGB2-202ENST00000438704 WRNQ14191 1432 aaPredicted RBP eCLIP12.67□□□□□ -0.38
HMGB2-202ENST00000438704 PRDM2Q13029 1718 aa12.67□□□□□ -0.38
HMGB2-202ENST00000438704 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
HMGB2-202ENST00000438704 ABCC8Q09428 1581 aa12.64□□□□□ -0.39
HMGB2-202ENST00000438704 PSEN1P49768 467 aa12.63□□□□□ -0.39
HMGB2-202ENST00000438704 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
HMGB2-202ENST00000438704 SLAIN1Q8ND83 568 aa12.63□□□□□ -0.39
HMGB2-202ENST00000438704 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
HMGB2-202ENST00000438704 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
HMGB2-202ENST00000438704 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
HMGB2-202ENST00000438704 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
HMGB2-202ENST00000438704 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
HMGB2-202ENST00000438704 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
HMGB2-202ENST00000438704 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
HMGB2-202ENST00000438704 PDCD7Q8N8D1 485 aaKnown RBP12.58□□□□□ -0.4
HMGB2-202ENST00000438704 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.4
HMGB2-202ENST00000438704 EEA1Q15075 1411 aa12.57□□□□□ -0.4
HMGB2-202ENST00000438704 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms