RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
HMGB2-202ENST00000438704 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
HMGB2-202ENST00000438704 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
HMGB2-202ENST00000438704 ROMO1P60602 79 aa3.29□□□□□ -1.88
HMGB2-202ENST00000438704 MT1BP07438 61 aa3.26□□□□□ -1.89
HMGB2-202ENST00000438704 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
HMGB2-202ENST00000438704 PLAC4Q8WY50 150 aa3.26□□□□□ -1.89
HMGB2-202ENST00000438704 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
HMGB2-202ENST00000438704 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
HMGB2-202ENST00000438704 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
HMGB2-202ENST00000438704 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
HMGB2-202ENST00000438704 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
HMGB2-202ENST00000438704 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
HMGB2-202ENST00000438704 MT1XP80297 61 aa3.16□□□□□ -1.9
HMGB2-202ENST00000438704 TNP1P09430 55 aa3.12□□□□□ -1.91
HMGB2-202ENST00000438704 PRO2289Q9P1D8 64 aa3.12□□□□□ -1.91
HMGB2-202ENST00000438704 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
HMGB2-202ENST00000438704 USH2AO75445 5202 aa3.09□□□□□ -1.91
HMGB2-202ENST00000438704 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
HMGB2-202ENST00000438704 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
HMGB2-202ENST00000438704 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
HMGB2-202ENST00000438704 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
HMGB2-202ENST00000438704 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
HMGB2-202ENST00000438704 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
HMGB2-202ENST00000438704 KRTAP12-3P60328 96 aa2.87□□□□□ -1.95
HMGB2-202ENST00000438704 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
HMGB2-202ENST00000438704 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
HMGB2-202ENST00000438704 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
HMGB2-202ENST00000438704 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
HMGB2-202ENST00000438704 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
HMGB2-202ENST00000438704 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
HMGB2-202ENST00000438704 MT1EP04732 61 aa2.77□□□□□ -1.97
HMGB2-202ENST00000438704 KMT2DO14686 5537 aa2.76□□□□□ -1.97
HMGB2-202ENST00000438704 MT1LQ93083 61 aa2.72□□□□□ -1.97
HMGB2-202ENST00000438704 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
HMGB2-202ENST00000438704 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
HMGB2-202ENST00000438704 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
HMGB2-202ENST00000438704 MT1GP13640 62 aa2.65□□□□□ -1.99
HMGB2-202ENST00000438704 SPRR2FQ96RM1 72 aa2.64□□□□□ -1.99
HMGB2-202ENST00000438704 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
HMGB2-202ENST00000438704 MT1MQ8N339 61 aa2.6□□□□□ -1.99
HMGB2-202ENST00000438704 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
HMGB2-202ENST00000438704 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
HMGB2-202ENST00000438704 SPRR2EP22531 72 aa2.5□□□□□ -2.01
HMGB2-202ENST00000438704 SPRR2BP35325 72 aa2.5□□□□□ -2.01
HMGB2-202ENST00000438704 SPRR2AP35326 72 aa2.5□□□□□ -2.01
HMGB2-202ENST00000438704 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
HMGB2-202ENST00000438704 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
HMGB2-202ENST00000438704 NEBP20929 6669 aa2.43□□□□□ -2.02
HMGB2-202ENST00000438704 SPRR2DP22532 72 aa2.42□□□□□ -2.02
HMGB2-202ENST00000438704 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.03
HMGB2-202ENST00000438704 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.03
HMGB2-202ENST00000438704 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
HMGB2-202ENST00000438704 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
HMGB2-202ENST00000438704 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
HMGB2-202ENST00000438704 INE1O15225 51 aa2.35□□□□□ -2.03
HMGB2-202ENST00000438704 MT1AP04731 61 aa2.33□□□□□ -2.04
HMGB2-202ENST00000438704 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
HMGB2-202ENST00000438704 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
HMGB2-202ENST00000438704 KRTAP20-1Q3LI63 56 aa2.2□□□□□ -2.06
HMGB2-202ENST00000438704 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
HMGB2-202ENST00000438704 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.07
HMGB2-202ENST00000438704 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
HMGB2-202ENST00000438704 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
HMGB2-202ENST00000438704 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
HMGB2-202ENST00000438704 MT4P47944 62 aa2.05□□□□□ -2.08
HMGB2-202ENST00000438704 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
HMGB2-202ENST00000438704 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
HMGB2-202ENST00000438704 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
HMGB2-202ENST00000438704 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
HMGB2-202ENST00000438704 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
HMGB2-202ENST00000438704 PRM1P04553 51 aa1.69□□□□□ -2.14
HMGB2-202ENST00000438704 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
HMGB2-202ENST00000438704 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
HMGB2-202ENST00000438704 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
HMGB2-202ENST00000438704 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
HMGB2-202ENST00000438704 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms