RNA–Protein interactions for RNA: ENST00000434210.5

SPTLC3-203, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-203ENST00000434210 SPDYE4A6NLX3 237 aa12.18□□□□□ -0.46
SPTLC3-203ENST00000434210 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
SPTLC3-203ENST00000434210 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
SPTLC3-203ENST00000434210 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
SPTLC3-203ENST00000434210 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
SPTLC3-203ENST00000434210 EVX2Q03828 476 aa12.1□□□□□ -0.47
SPTLC3-203ENST00000434210 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
SPTLC3-203ENST00000434210 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
SPTLC3-203ENST00000434210 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
SPTLC3-203ENST00000434210 BIVM-ERCC5R4GMW8 1640 aa11.97□□□□□ -0.49
SPTLC3-203ENST00000434210 CFTRP13569 1480 aa11.96□□□□□ -0.49
SPTLC3-203ENST00000434210 ABCC8Q09428 1581 aa11.96□□□□□ -0.5
SPTLC3-203ENST00000434210 PROM2Q8N271 834 aa11.95□□□□□ -0.5
SPTLC3-203ENST00000434210 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
SPTLC3-203ENST00000434210 TOP2BQ02880 1626 aa11.92□□□□□ -0.5
SPTLC3-203ENST00000434210 SYNJ1O43426 1573 aa11.9□□□□□ -0.5
SPTLC3-203ENST00000434210 WRNQ14191 1432 aaPredicted RBP eCLIP11.9□□□□□ -0.5
SPTLC3-203ENST00000434210 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
SPTLC3-203ENST00000434210 LAMC3Q9Y6N6 1575 aa11.88□□□□□ -0.51
SPTLC3-203ENST00000434210 EEA1Q15075 1411 aa11.87□□□□□ -0.51
SPTLC3-203ENST00000434210 CD44P16070 742 aaKnown RBP11.86□□□□□ -0.51
SPTLC3-203ENST00000434210 CADPSQ9ULU8 1353 aa11.83□□□□□ -0.52
SPTLC3-203ENST00000434210 GABBR2O75899 941 aa11.81□□□□□ -0.52
SPTLC3-203ENST00000434210 CUX1P39880 1505 aa11.78□□□□□ -0.52
SPTLC3-203ENST00000434210 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
SPTLC3-203ENST00000434210 KIF21BO75037 1637 aa11.76□□□□□ -0.53
SPTLC3-203ENST00000434210 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
SPTLC3-203ENST00000434210 FANCD2Q9BXW9 1451 aa11.72□□□□□ -0.53
SPTLC3-203ENST00000434210 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
SPTLC3-203ENST00000434210 FKBP8Q14318 412 aa11.7□□□□□ -0.54
SPTLC3-203ENST00000434210 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
SPTLC3-203ENST00000434210 KIF21AQ7Z4S6 1674 aa11.69□□□□□ -0.54
SPTLC3-203ENST00000434210 NPM1P06748 294 aaKnown RBP eCLIP11.69□□□□□ -0.54
SPTLC3-203ENST00000434210 CEP164Q9UPV0 1460 aa11.69□□□□□ -0.54
SPTLC3-203ENST00000434210 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
SPTLC3-203ENST00000434210 ERICH3Q5RHP9 1530 aa11.67□□□□□ -0.54
SPTLC3-203ENST00000434210 SOGA1O94964 1423 aa11.67□□□□□ -0.54
SPTLC3-203ENST00000434210 CLCN6P51797 869 aa11.66□□□□□ -0.54
SPTLC3-203ENST00000434210 PDS5BQ9NTI5 1447 aa11.66□□□□□ -0.54
SPTLC3-203ENST00000434210 NESP48681 1621 aa11.64□□□□□ -0.55
SPTLC3-203ENST00000434210 GOLGA3Q08378 1498 aa11.64□□□□□ -0.55
SPTLC3-203ENST00000434210 TOPBP1Q92547 1522 aa11.63□□□□□ -0.55
SPTLC3-203ENST00000434210 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
SPTLC3-203ENST00000434210 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
SPTLC3-203ENST00000434210 RUSC2Q8N2Y8 1516 aa11.61□□□□□ -0.55
SPTLC3-203ENST00000434210 KIF27Q86VH2 1401 aa11.6□□□□□ -0.55
SPTLC3-203ENST00000434210 POTEIP0CG38 1075 aa11.59□□□□□ -0.55
SPTLC3-203ENST00000434210 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
SPTLC3-203ENST00000434210 MIER1Q8N108 512 aa11.58□□□□□ -0.56
SPTLC3-203ENST00000434210 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.56
SPTLC3-203ENST00000434210 CUL7Q14999 1698 aa11.58□□□□□ -0.56
SPTLC3-203ENST00000434210 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
SPTLC3-203ENST00000434210 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
SPTLC3-203ENST00000434210 TNIKQ9UKE5 1360 aa11.57□□□□□ -0.56
SPTLC3-203ENST00000434210 PHF12Q96QT6 1004 aa11.57□□□□□ -0.56
SPTLC3-203ENST00000434210 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
SPTLC3-203ENST00000434210 LOC105371045A0A1W2PR82 267 aa11.55□□□□□ -0.56
SPTLC3-203ENST00000434210 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
SPTLC3-203ENST00000434210 WDR62O43379 1518 aa11.55□□□□□ -0.56
SPTLC3-203ENST00000434210 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
SPTLC3-203ENST00000434210 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
SPTLC3-203ENST00000434210 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
SPTLC3-203ENST00000434210 FAM9AQ8IZU1 332 aaPredicted RBP11.52□□□□□ -0.57
SPTLC3-203ENST00000434210 CUX2O14529 1486 aa11.51□□□□□ -0.57
SPTLC3-203ENST00000434210 THOC2Q8NI27 1593 aaKnown RBP11.51□□□□□ -0.57
SPTLC3-203ENST00000434210 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
SPTLC3-203ENST00000434210 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
SPTLC3-203ENST00000434210 CEP162Q5TB80 1403 aa11.5□□□□□ -0.57
SPTLC3-203ENST00000434210 RAPGEF2Q9Y4G8 1499 aa11.5□□□□□ -0.57
SPTLC3-203ENST00000434210 TSPYL2Q9H2G4 693 aaPredicted RBP11.49□□□□□ -0.57
SPTLC3-203ENST00000434210 PBRM1Q86U86 1689 aa11.49□□□□□ -0.57
SPTLC3-203ENST00000434210 CTTNBP2Q8WZ74 1663 aa11.47□□□□□ -0.57
SPTLC3-203ENST00000434210 CCDC61Q9Y6R9 512 aa11.46□□□□□ -0.57
SPTLC3-203ENST00000434210 RASEFQ8IZ41 740 aa11.45□□□□□ -0.58
SPTLC3-203ENST00000434210 LHX8Q68G74 356 aa11.43□□□□□ -0.58
SPTLC3-203ENST00000434210 MS4A3Q96HJ5 214 aa11.42□□□□□ -0.58
SPTLC3-203ENST00000434210 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
SPTLC3-203ENST00000434210 RAD54L2Q9Y4B4 1467 aa11.42□□□□□ -0.58
SPTLC3-203ENST00000434210 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
SPTLC3-203ENST00000434210 FBXO3Q9UK99 471 aa11.41□□□□□ -0.58
SPTLC3-203ENST00000434210 IGF1RP08069 1367 aa11.41□□□□□ -0.58
SPTLC3-203ENST00000434210 CLIP1P30622 1438 aa11.39□□□□□ -0.59
SPTLC3-203ENST00000434210 ADAMTS12P58397 1594 aa11.39□□□□□ -0.59
SPTLC3-203ENST00000434210 GAPVD1Q14C86 1478 aa11.38□□□□□ -0.59
SPTLC3-203ENST00000434210 NUBP1P53384 320 aa11.38□□□□□ -0.59
SPTLC3-203ENST00000434210 EFCAB5A4FU69 1503 aa11.37□□□□□ -0.59
SPTLC3-203ENST00000434210 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
SPTLC3-203ENST00000434210 ERCC6Q03468 1493 aa11.37□□□□□ -0.59
SPTLC3-203ENST00000434210 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
SPTLC3-203ENST00000434210 CARMIL1Q5VZK9 1371 aa11.36□□□□□ -0.59
SPTLC3-203ENST00000434210 VPS8Q8N3P4 1428 aa11.35□□□□□ -0.59
SPTLC3-203ENST00000434210 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
SPTLC3-203ENST00000434210 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
SPTLC3-203ENST00000434210 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
SPTLC3-203ENST00000434210 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
SPTLC3-203ENST00000434210 MAP3K13O43283 966 aa11.31□□□□□ -0.6
SPTLC3-203ENST00000434210 ARAP1Q96P48 1450 aa11.31□□□□□ -0.6
SPTLC3-203ENST00000434210 SAMD9Q5K651 1589 aa11.3□□□□□ -0.6
SPTLC3-203ENST00000434210 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
SPTLC3-203ENST00000434210 FHAD1B1AJZ9 1412 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms