RNA–Protein interactions for RNA: ENST00000434210.5

SPTLC3-203, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-203ENST00000434210 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
SPTLC3-203ENST00000434210 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
SPTLC3-203ENST00000434210 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
SPTLC3-203ENST00000434210 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
SPTLC3-203ENST00000434210 FOXD1Q16676 465 aa18.36■□□□□ 0.53
SPTLC3-203ENST00000434210 PLPPR3Q6T4P5 718 aa17.69■□□□□ 0.42
SPTLC3-203ENST00000434210 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
SPTLC3-203ENST00000434210 ADRA2BP18089 450 aa17.22■□□□□ 0.35
SPTLC3-203ENST00000434210 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
SPTLC3-203ENST00000434210 MSH5O43196 834 aa17.11■□□□□ 0.33
SPTLC3-203ENST00000434210 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
SPTLC3-203ENST00000434210 NISCHQ9Y2I1 1504 aa16.36■□□□□ 0.21
SPTLC3-203ENST00000434210 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
SPTLC3-203ENST00000434210 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
SPTLC3-203ENST00000434210 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
SPTLC3-203ENST00000434210 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
SPTLC3-203ENST00000434210 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
SPTLC3-203ENST00000434210 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
SPTLC3-203ENST00000434210 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
SPTLC3-203ENST00000434210 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
SPTLC3-203ENST00000434210 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
SPTLC3-203ENST00000434210 NPM3O75607 178 aaKnown RBP14.77□□□□□ -0.05
SPTLC3-203ENST00000434210 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
SPTLC3-203ENST00000434210 KCNA4P22459 653 aa14.62□□□□□ -0.07
SPTLC3-203ENST00000434210 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
SPTLC3-203ENST00000434210 CACNB1Q02641 598 aaPredicted RBP14.58□□□□□ -0.08
SPTLC3-203ENST00000434210 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
SPTLC3-203ENST00000434210 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
SPTLC3-203ENST00000434210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.38□□□□□ -0.112e-13■□□□□ 10.1
SPTLC3-203ENST00000434210 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
SPTLC3-203ENST00000434210 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
SPTLC3-203ENST00000434210 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
SPTLC3-203ENST00000434210 CAPN15O75808 1086 aa13.82□□□□□ -0.2
SPTLC3-203ENST00000434210 ZCCHC6Q5VYS8 1495 aaKnown RBP13.81□□□□□ -0.2
SPTLC3-203ENST00000434210 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
SPTLC3-203ENST00000434210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.74□□□□□ -0.21
SPTLC3-203ENST00000434210 DSG3P32926 999 aa13.74□□□□□ -0.21
SPTLC3-203ENST00000434210 HNRNPUL2Q1KMD3 747 aaKnown RBP13.74□□□□□ -0.21
SPTLC3-203ENST00000434210 APLP2Q06481 763 aa13.7□□□□□ -0.22
SPTLC3-203ENST00000434210 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
SPTLC3-203ENST00000434210 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
SPTLC3-203ENST00000434210 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
SPTLC3-203ENST00000434210 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
SPTLC3-203ENST00000434210 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
SPTLC3-203ENST00000434210 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
SPTLC3-203ENST00000434210 MYO15BQ96JP2 1530 aa13.53□□□□□ -0.24
SPTLC3-203ENST00000434210 ABCB7O75027 752 aa13.52□□□□□ -0.25
SPTLC3-203ENST00000434210 ZBTB22O15209 634 aa13.46□□□□□ -0.25
SPTLC3-203ENST00000434210 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
SPTLC3-203ENST00000434210 NACADO15069 1562 aa13.33□□□□□ -0.28
SPTLC3-203ENST00000434210 POLA2Q14181 598 aa13.31□□□□□ -0.28
SPTLC3-203ENST00000434210 ABCC9O60706 1549 aa13.23□□□□□ -0.29
SPTLC3-203ENST00000434210 RB1CC1Q8TDY2 1594 aa13.18□□□□□ -0.3
SPTLC3-203ENST00000434210 ATXN8OSP0DMR3 200 aa13.15□□□□□ -0.3
SPTLC3-203ENST00000434210 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
SPTLC3-203ENST00000434210 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
SPTLC3-203ENST00000434210 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
SPTLC3-203ENST00000434210 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
SPTLC3-203ENST00000434210 DCAF8L2P0C7V8 631 aa13.03□□□□□ -0.32
SPTLC3-203ENST00000434210 UNC13AQ9UPW8 1703 aa12.99□□□□□ -0.33
SPTLC3-203ENST00000434210 POTEHQ6S545 545 aa12.94□□□□□ -0.34
SPTLC3-203ENST00000434210 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
SPTLC3-203ENST00000434210 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
SPTLC3-203ENST00000434210 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
SPTLC3-203ENST00000434210 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
SPTLC3-203ENST00000434210 FBLN2P98095 1184 aa12.77□□□□□ -0.37
SPTLC3-203ENST00000434210 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
SPTLC3-203ENST00000434210 MKRN4PQ13434 485 aaPredicted RBP12.75□□□□□ -0.37
SPTLC3-203ENST00000434210 BICRAQ9NZM4 1560 aa12.75□□□□□ -0.37
SPTLC3-203ENST00000434210 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
SPTLC3-203ENST00000434210 BAZ1AQ9NRL2 1556 aaPredicted RBP12.68□□□□□ -0.38
SPTLC3-203ENST00000434210 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
SPTLC3-203ENST00000434210 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
SPTLC3-203ENST00000434210 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
SPTLC3-203ENST00000434210 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
SPTLC3-203ENST00000434210 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
SPTLC3-203ENST00000434210 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
SPTLC3-203ENST00000434210 CECR2Q9BXF3 1484 aa12.58□□□□□ -0.4
SPTLC3-203ENST00000434210 MROH2BQ7Z745 1585 aa12.57□□□□□ -0.4
SPTLC3-203ENST00000434210 SUPT5HO00267 1087 aaKnown RBP12.55□□□□□ -0.4
SPTLC3-203ENST00000434210 PEG3Q9GZU2 1588 aa12.55□□□□□ -0.4
SPTLC3-203ENST00000434210 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
SPTLC3-203ENST00000434210 ZNF692Q9BU19 519 aaPredicted RBP12.51□□□□□ -0.41
SPTLC3-203ENST00000434210 WIZO95785 1651 aa12.51□□□□□ -0.41
SPTLC3-203ENST00000434210 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
SPTLC3-203ENST00000434210 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
SPTLC3-203ENST00000434210 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPTLC3-203ENST00000434210 SMARCA2P51531 1590 aa12.4□□□□□ -0.42
SPTLC3-203ENST00000434210 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
SPTLC3-203ENST00000434210 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
SPTLC3-203ENST00000434210 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
SPTLC3-203ENST00000434210 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
SPTLC3-203ENST00000434210 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
SPTLC3-203ENST00000434210 ATAD2BQ9ULI0 1458 aa12.29□□□□□ -0.44
SPTLC3-203ENST00000434210 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
SPTLC3-203ENST00000434210 PRKAR2AP13861 404 aaKnown RBP12.23□□□□□ -0.45
SPTLC3-203ENST00000434210 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
SPTLC3-203ENST00000434210 HAX1O00165 279 aa12.2□□□□□ -0.46
SPTLC3-203ENST00000434210 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
SPTLC3-203ENST00000434210 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms