RNA–Protein interactions for RNA: ENST00000433298.5

LRCH3-205, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-205ENST00000433298 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
LRCH3-205ENST00000433298 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
LRCH3-205ENST00000433298 FAM69CQ0P6D2 419 aa14.16□□□□□ -0.14
LRCH3-205ENST00000433298 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
LRCH3-205ENST00000433298 PBRM1Q86U86 1689 aa14.11□□□□□ -0.15
LRCH3-205ENST00000433298 KDM6BO15054 1643 aa14.1□□□□□ -0.15
LRCH3-205ENST00000433298 CEP170Q5SW79 1584 aa14.09□□□□□ -0.15
LRCH3-205ENST00000433298 WDR97A6NE52 1622 aa14.08□□□□□ -0.16
LRCH3-205ENST00000433298 TSPOAP1O95153 1857 aa14.07□□□□□ -0.16
LRCH3-205ENST00000433298 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
LRCH3-205ENST00000433298 ABCC10Q5T3U5 1492 aa14.02□□□□□ -0.16
LRCH3-205ENST00000433298 CUX1P39880 1505 aa14.01□□□□□ -0.17
LRCH3-205ENST00000433298 ADGRL1O94910 1474 aa14.01□□□□□ -0.17
LRCH3-205ENST00000433298 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
LRCH3-205ENST00000433298 GRIN2AQ12879 1464 aa13.99□□□□□ -0.17
LRCH3-205ENST00000433298 DIP2BQ9P265 1576 aa13.99□□□□□ -0.17
LRCH3-205ENST00000433298 FBXO41Q8TF61 875 aa13.97□□□□□ -0.17
LRCH3-205ENST00000433298 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
LRCH3-205ENST00000433298 SHROOM2Q13796 1616 aa13.94□□□□□ -0.18
LRCH3-205ENST00000433298 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
LRCH3-205ENST00000433298 NUP160Q12769 1436 aa13.93□□□□□ -0.18
LRCH3-205ENST00000433298 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
LRCH3-205ENST00000433298 ADAMTS12P58397 1594 aa13.91□□□□□ -0.18
LRCH3-205ENST00000433298 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
LRCH3-205ENST00000433298 MAPKBP1O60336 1514 aa13.9□□□□□ -0.19
LRCH3-205ENST00000433298 LMTK3Q96Q04 1460 aa13.88□□□□□ -0.19
LRCH3-205ENST00000433298 ADCY10Q96PN6 1610 aa13.87□□□□□ -0.19
LRCH3-205ENST00000433298 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
LRCH3-205ENST00000433298 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
LRCH3-205ENST00000433298 TTBK1Q5TCY1 1321 aaPredicted RBP13.86□□□□□ -0.19
LRCH3-205ENST00000433298 RNF39Q9H2S5 420 aa13.84□□□□□ -0.19
LRCH3-205ENST00000433298 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
LRCH3-205ENST00000433298 ILDR2Q71H61 639 aa13.78□□□□□ -0.2
LRCH3-205ENST00000433298 PPRC1Q5VV67 1664 aaKnown RBP13.76□□□□□ -0.21
LRCH3-205ENST00000433298 COL17A1Q9UMD9 1497 aaPredicted RBP13.75□□□□□ -0.21
LRCH3-205ENST00000433298 KCNA4P22459 653 aa13.73□□□□□ -0.21
LRCH3-205ENST00000433298 SOCS7O14512 581 aa13.72□□□□□ -0.21
LRCH3-205ENST00000433298 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
LRCH3-205ENST00000433298 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
LRCH3-205ENST00000433298 DISP3Q9P2K9 1392 aa13.71□□□□□ -0.21
LRCH3-205ENST00000433298 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
LRCH3-205ENST00000433298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.221e-7■■□□□ 14.2
LRCH3-205ENST00000433298 ASXL2Q76L83 1435 aa13.68□□□□□ -0.22
LRCH3-205ENST00000433298 ERICH3Q5RHP9 1530 aa13.66□□□□□ -0.22
LRCH3-205ENST00000433298 TOP2BQ02880 1626 aa13.66□□□□□ -0.22
LRCH3-205ENST00000433298 CUL7Q14999 1698 aa13.63□□□□□ -0.23
LRCH3-205ENST00000433298 PTPRGP23470 1445 aa13.62□□□□□ -0.23
LRCH3-205ENST00000433298 GLI2P10070 1586 aa13.62□□□□□ -0.23
LRCH3-205ENST00000433298 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
LRCH3-205ENST00000433298 KIF21BO75037 1637 aa13.6□□□□□ -0.23
LRCH3-205ENST00000433298 ABCC2Q92887 1545 aa13.59□□□□□ -0.23
LRCH3-205ENST00000433298 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
LRCH3-205ENST00000433298 TEX14Q8IWB6 1497 aa13.57□□□□□ -0.24
LRCH3-205ENST00000433298 EPRSP07814 1512 aaKnown RBP13.56□□□□□ -0.24
LRCH3-205ENST00000433298 BIVM-ERCC5R4GMW8 1640 aa13.54□□□□□ -0.24
LRCH3-205ENST00000433298 KIAA0586Q9BVV6 1533 aa13.54□□□□□ -0.24
LRCH3-205ENST00000433298 CERKQ8TCT0 537 aa13.52□□□□□ -0.25
LRCH3-205ENST00000433298 PTPRMP28827 1452 aa13.51□□□□□ -0.25
LRCH3-205ENST00000433298 HSPA2P54652 639 aa13.51□□□□□ -0.25
LRCH3-205ENST00000433298 TNIKQ9UKE5 1360 aa13.5□□□□□ -0.25
LRCH3-205ENST00000433298 PCF11O94913 1555 aaKnown RBP13.49□□□□□ -0.25
LRCH3-205ENST00000433298 SPATA31D1Q6ZQQ2 1576 aa13.48□□□□□ -0.25
LRCH3-205ENST00000433298 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
LRCH3-205ENST00000433298 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.25
LRCH3-205ENST00000433298 KCNH8Q96L42 1107 aa13.46□□□□□ -0.25
LRCH3-205ENST00000433298 CARMIL2Q6F5E8 1435 aa13.46□□□□□ -0.26
LRCH3-205ENST00000433298 ARID4BQ4LE39 1312 aaPredicted RBP13.43□□□□□ -0.26
LRCH3-205ENST00000433298 UHRF1BP1LA0JNW5 1464 aa13.43□□□□□ -0.26
LRCH3-205ENST00000433298 ADAMTSL3P82987 1691 aa13.43□□□□□ -0.26
LRCH3-205ENST00000433298 CD109Q6YHK3 1445 aa13.42□□□□□ -0.26
LRCH3-205ENST00000433298 MADDQ8WXG6 1647 aa13.41□□□□□ -0.26
LRCH3-205ENST00000433298 KDM5BQ9UGL1 1544 aa13.4□□□□□ -0.26
LRCH3-205ENST00000433298 WDR7Q9Y4E6 1490 aa13.39□□□□□ -0.27
LRCH3-205ENST00000433298 IGF1RP08069 1367 aa13.37□□□□□ -0.27
LRCH3-205ENST00000433298 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
LRCH3-205ENST00000433298 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
LRCH3-205ENST00000433298 CFAP43Q8NDM7 1665 aa13.34□□□□□ -0.27
LRCH3-205ENST00000433298 BCORL1Q5H9F3 1711 aa13.34□□□□□ -0.27
LRCH3-205ENST00000433298 IQGAP2Q13576 1575 aa13.34□□□□□ -0.27
LRCH3-205ENST00000433298 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
LRCH3-205ENST00000433298 RAPGEF3O95398 923 aa13.33□□□□□ -0.28
LRCH3-205ENST00000433298 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
LRCH3-205ENST00000433298 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
LRCH3-205ENST00000433298 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
LRCH3-205ENST00000433298 CARMIL1Q5VZK9 1371 aa13.3□□□□□ -0.28
LRCH3-205ENST00000433298 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
LRCH3-205ENST00000433298 ARAP3Q8WWN8 1544 aa13.27□□□□□ -0.29
LRCH3-205ENST00000433298 MLECQ14165 292 aa13.26□□□□□ -0.29
LRCH3-205ENST00000433298 KIAA0556O60303 1618 aa13.24□□□□□ -0.29
LRCH3-205ENST00000433298 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
LRCH3-205ENST00000433298 FRMPD1Q5SYB0 1578 aa13.19□□□□□ -0.3
LRCH3-205ENST00000433298 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
LRCH3-205ENST00000433298 APLP2Q06481 763 aa13.17□□□□□ -0.3
LRCH3-205ENST00000433298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
LRCH3-205ENST00000433298 CAPN15O75808 1086 aa13.15□□□□□ -0.3
LRCH3-205ENST00000433298 CEBPAP49715 358 aaPredicted RBP13.15□□□□□ -0.3
LRCH3-205ENST00000433298 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
LRCH3-205ENST00000433298 ABCA8O94911 1581 aa13.15□□□□□ -0.3
LRCH3-205ENST00000433298 STRCQ7RTU9 1775 aa13.15□□□□□ -0.31
LRCH3-205ENST00000433298 ARHGEF40Q8TER5 1519 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms