RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PAXIP1Q6ZW49 1069 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P27-201ENST00000431429 CLEC11AQ9Y240 323 aa7.55□□□□□ -1.2
HMGB1P27-201ENST00000431429 KDM2AQ9Y2K7 1162 aa7.55□□□□□ -1.2
HMGB1P27-201ENST00000431429 CHGAP10645 457 aaKnown RBP7.53□□□□□ -1.2
HMGB1P27-201ENST00000431429 RASEFQ8IZ41 740 aa7.52□□□□□ -1.21
HMGB1P27-201ENST00000431429 SPRYD3Q8NCJ5 442 aa7.52□□□□□ -1.21
HMGB1P27-201ENST00000431429 FAM212AQ96EL1 285 aa7.51□□□□□ -1.21
HMGB1P27-201ENST00000431429 SGIP1Q9BQI5 828 aa7.51□□□□□ -1.21
HMGB1P27-201ENST00000431429 RIOK3O14730 519 aaKnown RBP7.5□□□□□ -1.21
HMGB1P27-201ENST00000431429 CFAP44Q96MT7 982 aa7.5□□□□□ -1.21
HMGB1P27-201ENST00000431429 DCAF8Q5TAQ9 597 aa7.49□□□□□ -1.21
HMGB1P27-201ENST00000431429 NKX1-1Q15270 411 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P27-201ENST00000431429 TSHZ2Q9NRE2 1034 aa7.47□□□□□ -1.21
HMGB1P27-201ENST00000431429 VGFO15240 615 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P27-201ENST00000431429 BCANQ96GW7 911 aa7.45□□□□□ -1.22
HMGB1P27-201ENST00000431429 TAOK2Q9UL54 1235 aa7.44□□□□□ -1.22
HMGB1P27-201ENST00000431429 GTPBP6O43824 516 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P27-201ENST00000431429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P27-201ENST00000431429 PYGBP11216 843 aa7.39□□□□□ -1.23
HMGB1P27-201ENST00000431429 FXR2P51116 673 aaKnown RBP eCLIP7.39□□□□□ -1.23
HMGB1P27-201ENST00000431429 CHADLQ6NUI6 762 aa7.39□□□□□ -1.23
HMGB1P27-201ENST00000431429 ZFP91Q96JP5 570 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P27-201ENST00000431429 FARP1Q9Y4F1 1045 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P27-201ENST00000431429 STK25O00506 426 aa7.38□□□□□ -1.23
HMGB1P27-201ENST00000431429 BCL11BQ9C0K0 894 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P27-201ENST00000431429 CCDC61Q9Y6R9 512 aa7.36□□□□□ -1.23
HMGB1P27-201ENST00000431429 PRKAR2AP13861 404 aaKnown RBP7.33□□□□□ -1.24
HMGB1P27-201ENST00000431429 ZNF467Q7Z7K2 595 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P27-201ENST00000431429 STK24Q9Y6E0 443 aa7.32□□□□□ -1.24
HMGB1P27-201ENST00000431429 TSPYL2Q9H2G4 693 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P27-201ENST00000431429 ZNF579Q8NAF0 562 aaKnown RBP7.3□□□□□ -1.24
HMGB1P27-201ENST00000431429 RYDENQ9NUL5 291 aaKnown RBP7.3□□□□□ -1.24
HMGB1P27-201ENST00000431429 PDAP1Q13442 181 aaKnown RBP7.29□□□□□ -1.24
HMGB1P27-201ENST00000431429 PIP4P2Q8N4L2 257 aa7.28□□□□□ -1.24
HMGB1P27-201ENST00000431429 PRKCSHP14314 528 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P27-201ENST00000431429 CHRDL2Q6WN34 429 aa7.26□□□□□ -1.25
HMGB1P27-201ENST00000431429 PCDHB8Q9UN66 801 aa7.26□□□□□ -1.25
HMGB1P27-201ENST00000431429 PCDHB13Q9Y5F0 798 aa7.26□□□□□ -1.25
HMGB1P27-201ENST00000431429 KIF12Q96FN5 646 aa7.24□□□□□ -1.25
HMGB1P27-201ENST00000431429 PSEN1P49768 467 aa7.23□□□□□ -1.25
HMGB1P27-201ENST00000431429 IFNL1Q8IU54 200 aa7.23□□□□□ -1.25
HMGB1P27-201ENST00000431429 MFRPQ9BY79 579 aa7.23□□□□□ -1.25
HMGB1P27-201ENST00000431429 MAP3K13O43283 966 aa7.21□□□□□ -1.26
HMGB1P27-201ENST00000431429 TPRNQ4KMQ1 711 aa7.2□□□□□ -1.26
HMGB1P27-201ENST00000431429 CADPS2Q86UW7 1296 aa7.2□□□□□ -1.26
HMGB1P27-201ENST00000431429 FBXO22Q8NEZ5 403 aa7.2□□□□□ -1.26
HMGB1P27-201ENST00000431429 PAK3O75914 559 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P27-201ENST00000431429 NBR1Q14596 966 aa7.17□□□□□ -1.26
HMGB1P27-201ENST00000431429 SOX12O15370 315 aa7.15□□□□□ -1.26
HMGB1P27-201ENST00000431429 EFCAB3Q8N7B9 438 aa7.15□□□□□ -1.26
HMGB1P27-201ENST00000431429 PPP1R37O75864 691 aa7.14□□□□□ -1.27
HMGB1P27-201ENST00000431429 CD44P16070 742 aaKnown RBP7.13□□□□□ -1.27
HMGB1P27-201ENST00000431429 ZRANB1Q9UGI0 708 aa7.13□□□□□ -1.27
HMGB1P27-201ENST00000431429 C19orf67A6NJJ6 358 aa7.12□□□□□ -1.27
HMGB1P27-201ENST00000431429 NLRP6P59044 892 aa7.12□□□□□ -1.27
HMGB1P27-201ENST00000431429 P3H3Q8IVL6 736 aa7.12□□□□□ -1.27
HMGB1P27-201ENST00000431429 PHF12Q96QT6 1004 aa7.12□□□□□ -1.27
HMGB1P27-201ENST00000431429 CABP2Q9NPB3 220 aa7.12□□□□□ -1.27
HMGB1P27-201ENST00000431429 PHF8Q9UPP1 1060 aa7.12□□□□□ -1.27
HMGB1P27-201ENST00000431429 KCNV2Q8TDN2 545 aa7.11□□□□□ -1.27
HMGB1P27-201ENST00000431429 MS4A4AQ96JQ5 239 aa7.11□□□□□ -1.27
HMGB1P27-201ENST00000431429 ILDR1Q86SU0 546 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P27-201ENST00000431429 TRPC6Q9Y210 931 aa7.08□□□□□ -1.28
HMGB1P27-201ENST00000431429 MS4A3Q96HJ5 214 aa7.07□□□□□ -1.28
HMGB1P27-201ENST00000431429 NCKAP5LQ9HCH0 1330 aa7.05□□□□□ -1.28
HMGB1P27-201ENST00000431429 MFSD10Q14728 455 aa7.05□□□□□ -1.28
HMGB1P27-201ENST00000431429 TIE1P35590 1138 aa7.04□□□□□ -1.28
HMGB1P27-201ENST00000431429 CRISPLD2Q9H0B8 497 aa7.04□□□□□ -1.28
HMGB1P27-201ENST00000431429 ARHGEF1Q92888 912 aaKnown RBP7.03□□□□□ -1.28
HMGB1P27-201ENST00000431429 TMEM106CQ9BVX2 250 aa7.03□□□□□ -1.28
HMGB1P27-201ENST00000431429 WDR70Q9NW82 654 aa7.03□□□□□ -1.28
HMGB1P27-201ENST00000431429 ARIH1Q9Y4X5 557 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P27-201ENST00000431429 TTLL13PA6NNM8 815 aa7.01□□□□□ -1.29
HMGB1P27-201ENST00000431429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGB1P27-201ENST00000431429 E2F4Q16254 413 aa7□□□□□ -1.29
HMGB1P27-201ENST00000431429 CAMK2BQ13554 666 aa6.99□□□□□ -1.29
HMGB1P27-201ENST00000431429 BMP2KQ9NSY1 1161 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P27-201ENST00000431429 TESPA1A2RU30 521 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P27-201ENST00000431429 PDE4AP27815 886 aa6.97□□□□□ -1.29
HMGB1P27-201ENST00000431429 CLCN6P51797 869 aa6.96□□□□□ -1.3
HMGB1P27-201ENST00000431429 LMOD2Q6P5Q4 547 aa6.96□□□□□ -1.3
HMGB1P27-201ENST00000431429 GALR2O43603 387 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P27-201ENST00000431429 MKRN3Q13064 507 aaKnown RBP6.95□□□□□ -1.3
HMGB1P27-201ENST00000431429 LARP6Q9BRS8 491 aaKnown RBP6.95□□□□□ -1.3
HMGB1P27-201ENST00000431429 EVX2Q03828 476 aa6.94□□□□□ -1.3
HMGB1P27-201ENST00000431429 GOLGA2Q08379 1002 aa6.94□□□□□ -1.3
HMGB1P27-201ENST00000431429 PDCD7Q8N8D1 485 aaKnown RBP6.93□□□□□ -1.3
HMGB1P27-201ENST00000431429 DDX27Q96GQ7 796 aaKnown RBP6.93□□□□□ -1.3
HMGB1P27-201ENST00000431429 TRIM35Q9UPQ4 493 aa6.93□□□□□ -1.3
HMGB1P27-201ENST00000431429 SEMA3EO15041 775 aa6.92□□□□□ -1.3
HMGB1P27-201ENST00000431429 GPHNQ9NQX3 736 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P27-201ENST00000431429 ASTLQ6HA08 431 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P27-201ENST00000431429 TMEM121BQ9BXQ6 578 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P27-201ENST00000431429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.91□□□□□ -1.3
HMGB1P27-201ENST00000431429 IRX5P78411 483 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P27-201ENST00000431429 ATMINO43313 823 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P27-201ENST00000431429 ATN1P54259 1190 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P27-201ENST00000431429 DPY19L2Q6NUT2 758 aa6.89□□□□□ -1.31
HMGB1P27-201ENST00000431429 PPP1R15BQ5SWA1 713 aa6.88□□□□□ -1.31
HMGB1P27-201ENST00000431429 IER5LQ5T953 404 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms