RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 BECN1Q14457 450 aa8.25□□□□□ -1.09
CHD8-202ENST00000430710 TMC1Q8TDI8 760 aa8.24□□□□□ -1.09
CHD8-202ENST00000430710 MLECQ14165 292 aa8.24□□□□□ -1.09
CHD8-202ENST00000430710 KCNH8Q96L42 1107 aa8.23□□□□□ -1.09
CHD8-202ENST00000430710 ARXQ96QS3 562 aa8.23□□□□□ -1.09
CHD8-202ENST00000430710 NOP58Q9Y2X3 529 aaKnown RBP8.22□□□□□ -1.09
CHD8-202ENST00000430710 MRS2Q9HD23 443 aa8.22□□□□□ -1.09
CHD8-202ENST00000430710 IRX6P78412 446 aaPredicted RBP8.21□□□□□ -1.09
CHD8-202ENST00000430710 SUPT16HQ9Y5B9 1047 aaKnown RBP8.21□□□□□ -1.09
CHD8-202ENST00000430710 CHMP7Q8WUX9 453 aaPredicted RBP8.21□□□□□ -1.09
CHD8-202ENST00000430710 MYO15BQ96JP2 1530 aa8.21□□□□□ -1.1
CHD8-202ENST00000430710 EEA1Q15075 1411 aa8.2□□□□□ -1.1
CHD8-202ENST00000430710 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
CHD8-202ENST00000430710 NAP1L5Q96NT1 182 aaPredicted RBP8.18□□□□□ -1.1
CHD8-202ENST00000430710 PPP4R2Q9NY27 417 aa8.18□□□□□ -1.1
CHD8-202ENST00000430710 GOLGA6L22H0YM25 854 aa8.18□□□□□ -1.1
CHD8-202ENST00000430710 DEKP35659 375 aaKnown RBP8.18□□□□□ -1.1
CHD8-202ENST00000430710 LMOD2Q6P5Q4 547 aa8.16□□□□□ -1.1
CHD8-202ENST00000430710 SALL2Q9Y467 1007 aaPredicted RBP8.15□□□□□ -1.1
CHD8-202ENST00000430710 WDR43Q15061 677 aaKnown RBP eCLIP8.15□□□□□ -1.117e-11■■□□□ 11.5
CHD8-202ENST00000430710 ZCCHC6Q5VYS8 1495 aaKnown RBP8.14□□□□□ -1.11
CHD8-202ENST00000430710 AMER1Q5JTC6 1135 aaPredicted RBP8.13□□□□□ -1.11
CHD8-202ENST00000430710 EIF4G2P78344 907 aaKnown RBP eCLIP8.13□□□□□ -1.11
CHD8-202ENST00000430710 TIMELESSQ9UNS1 1208 aa8.13□□□□□ -1.11
CHD8-202ENST00000430710 RBM19Q9Y4C8 960 aaKnown RBP8.13□□□□□ -1.11
CHD8-202ENST00000430710 NCLP19338 710 aaKnown RBP8.13□□□□□ -1.11
CHD8-202ENST00000430710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.12□□□□□ -1.111e-6■■■□□ 19
CHD8-202ENST00000430710 L1TD1Q5T7N2 865 aaKnown RBP8.11□□□□□ -1.11
CHD8-202ENST00000430710 CCDC9Q9Y3X0 531 aaKnown RBP8.11□□□□□ -1.11
CHD8-202ENST00000430710 MEX3CQ5U5Q3 659 aaKnown RBP8.11□□□□□ -1.11
CHD8-202ENST00000430710 LAS1LQ9Y4W2 734 aaKnown RBP8.11□□□□□ -1.11
CHD8-202ENST00000430710 DNTTIP2Q5QJE6 756 aaKnown RBP8.1□□□□□ -1.11
CHD8-202ENST00000430710 CDK11BP21127 795 aaKnown RBP8.1□□□□□ -1.11
CHD8-202ENST00000430710 PTMAP06454 111 aaKnown RBP8.1□□□□□ -1.11
CHD8-202ENST00000430710 MYH16Q9H6N6 1097 aa8.09□□□□□ -1.11
CHD8-202ENST00000430710 CYB5RLQ6IPT4 315 aa8.09□□□□□ -1.11
CHD8-202ENST00000430710 KLHL34Q8N239 644 aa8.09□□□□□ -1.11
CHD8-202ENST00000430710 CLIP1P30622 1438 aa8.08□□□□□ -1.12
CHD8-202ENST00000430710 NPHP1O15259 732 aa8.08□□□□□ -1.12
CHD8-202ENST00000430710 DCAF8L1A6NGE4 600 aa8.08□□□□□ -1.12
CHD8-202ENST00000430710 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
CHD8-202ENST00000430710 CEP162Q5TB80 1403 aa8.07□□□□□ -1.12
CHD8-202ENST00000430710 PPP1R15AO75807 674 aaPredicted RBP8.07□□□□□ -1.12
CHD8-202ENST00000430710 SCRIBQ14160 1630 aa8.07□□□□□ -1.12
CHD8-202ENST00000430710 GOLGA3Q08378 1498 aa8.06□□□□□ -1.12
CHD8-202ENST00000430710 HIRIP3Q9BW71 556 aaPredicted RBP8.06□□□□□ -1.12
CHD8-202ENST00000430710 TNIKQ9UKE5 1360 aa8.05□□□□□ -1.12
CHD8-202ENST00000430710 CCER2I3L3R5 266 aa8.04□□□□□ -1.12
CHD8-202ENST00000430710 B4GALNT3Q6L9W6 998 aa8.04□□□□□ -1.12
CHD8-202ENST00000430710 TSHZ2Q9NRE2 1034 aa8.04□□□□□ -1.12
CHD8-202ENST00000430710 MSNP26038 577 aaKnown RBP8.03□□□□□ -1.12
CHD8-202ENST00000430710 CASC1Q6TDU7 716 aa8.02□□□□□ -1.13
CHD8-202ENST00000430710 CHAF1AQ13111 956 aaPredicted RBP8.01□□□□□ -1.13
CHD8-202ENST00000430710 MTUS2Q5JR59 1369 aa8.01□□□□□ -1.13
CHD8-202ENST00000430710 CHIC2Q9UKJ5 165 aa8□□□□□ -1.13
CHD8-202ENST00000430710 PTMSP20962 102 aa7.99□□□□□ -1.13
CHD8-202ENST00000430710 PNNQ9H307 717 aaKnown RBP7.99□□□□□ -1.13
CHD8-202ENST00000430710 HSP90AB1P08238 724 aaKnown RBP7.99□□□□□ -1.13
CHD8-202ENST00000430710 ZRSR1Q15695 479 aaKnown RBP7.99□□□□□ -1.13
CHD8-202ENST00000430710 RSF1Q96T23 1441 aaPredicted RBP7.98□□□□□ -1.13
CHD8-202ENST00000430710 TSPY4P0CV99 314 aa7.97□□□□□ -1.13
CHD8-202ENST00000430710 TSPY10P0CW01 314 aa7.97□□□□□ -1.13
CHD8-202ENST00000430710 KDM2AQ9Y2K7 1162 aa7.97□□□□□ -1.13
CHD8-202ENST00000430710 GOLGA6L6A8MZA4 724 aa7.97□□□□□ -1.13
CHD8-202ENST00000430710 RSPH6AQ9H0K4 717 aa7.97□□□□□ -1.13
CHD8-202ENST00000430710 USP35Q9P2H5 1018 aa7.97□□□□□ -1.13
CHD8-202ENST00000430710 RGS3P49796 1198 aa7.97□□□□□ -1.13
CHD8-202ENST00000430710 FTSJ3Q8IY81 847 aaKnown RBP7.97□□□□□ -1.13
CHD8-202ENST00000430710 HSCBQ8IWL3 235 aa7.97□□□□□ -1.13
CHD8-202ENST00000430710 IPO9Q96P70 1041 aaKnown RBP7.96□□□□□ -1.13
CHD8-202ENST00000430710 TCERG1O14776 1098 aaKnown RBP7.96□□□□□ -1.14
CHD8-202ENST00000430710 NRDCO43847 1150 aa7.96□□□□□ -1.14
CHD8-202ENST00000430710 CEP164Q9UPV0 1460 aa7.96□□□□□ -1.14
CHD8-202ENST00000430710 MS4A1P11836 297 aa7.95□□□□□ -1.14
CHD8-202ENST00000430710 PIP4K2BP78356 416 aa7.95□□□□□ -1.14
CHD8-202ENST00000430710 CHMP4BQ9H444 224 aaKnown RBP7.95□□□□□ -1.14
CHD8-202ENST00000430710 CDCA8Q53HL2 280 aa7.95□□□□□ -1.14
CHD8-202ENST00000430710 CFAP44Q96MT7 982 aa7.93□□□□□ -1.14
CHD8-202ENST00000430710 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
CHD8-202ENST00000430710 HSP90AA2PQ14568 343 aaPredicted RBP7.93□□□□□ -1.14
CHD8-202ENST00000430710 KNSTRNQ9Y448 316 aa7.93□□□□□ -1.14
CHD8-202ENST00000430710 TULP1O00294 542 aaPredicted RBP7.92□□□□□ -1.14
CHD8-202ENST00000430710 GBP4Q96PP9 640 aa7.92□□□□□ -1.14
CHD8-202ENST00000430710 PLCB2Q00722 1185 aa7.92□□□□□ -1.14
CHD8-202ENST00000430710 MSH5O43196 834 aa7.92□□□□□ -1.14
CHD8-202ENST00000430710 RB1CC1Q8TDY2 1594 aa7.91□□□□□ -1.14
CHD8-202ENST00000430710 RRP7BPQ9NSQ0 103 aa7.91□□□□□ -1.14
CHD8-202ENST00000430710 FANCIQ9NVI1 1328 aa7.91□□□□□ -1.14
CHD8-202ENST00000430710 PPP1R1BQ9UD71 204 aaPredicted RBP7.91□□□□□ -1.14
CHD8-202ENST00000430710 GOLGA6L3A6NEY3 463 aa7.9□□□□□ -1.14
CHD8-202ENST00000430710 CCNB3Q8WWL7 1395 aa7.9□□□□□ -1.14
CHD8-202ENST00000430710 KIAA2012Q0VF49 1180 aa7.9□□□□□ -1.14
CHD8-202ENST00000430710 CARD11Q9BXL7 1154 aa7.89□□□□□ -1.15
CHD8-202ENST00000430710 SIN3AQ96ST3 1273 aa7.88□□□□□ -1.15
CHD8-202ENST00000430710 PRKCSHP14314 528 aaPredicted RBP7.87□□□□□ -1.15
CHD8-202ENST00000430710 WRNQ14191 1432 aaPredicted RBP eCLIP7.87□□□□□ -1.15
CHD8-202ENST00000430710 FRAT1Q92837 279 aaPredicted RBP7.87□□□□□ -1.15
CHD8-202ENST00000430710 SOX12O15370 315 aa7.86□□□□□ -1.15
CHD8-202ENST00000430710 SENP3-EIF4A1A0A087X0R7 540 aa7.86□□□□□ -1.15
CHD8-202ENST00000430710 RCAN3Q9UKA8 241 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms