RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.01
POLR2J4-202ENST00000427076 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
POLR2J4-202ENST00000427076 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
POLR2J4-202ENST00000427076 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
POLR2J4-202ENST00000427076 TMC1Q8TDI8 760 aa15.05■□□□□ -0
POLR2J4-202ENST00000427076 HIRIP3Q9BW71 556 aaPredicted RBP15.05■□□□□ -0
POLR2J4-202ENST00000427076 MYH16Q9H6N6 1097 aa15.05■□□□□ -0
POLR2J4-202ENST00000427076 ZRSR1Q15695 479 aaKnown RBP15.04■□□□□ -0
POLR2J4-202ENST00000427076 BECN1Q14457 450 aa15.04■□□□□ -0
POLR2J4-202ENST00000427076 SPRYD3Q8NCJ5 442 aa15.04■□□□□ -0
POLR2J4-202ENST00000427076 GOLGA6L22H0YM25 854 aa15.03■□□□□ -0
POLR2J4-202ENST00000427076 WDR43Q15061 677 aaKnown RBP eCLIP15.02■□□□□ -0
POLR2J4-202ENST00000427076 ABCC9O60706 1549 aa15.02□□□□□ -0.01
POLR2J4-202ENST00000427076 DDRGK1Q96HY6 314 aa15.01□□□□□ -0.01
POLR2J4-202ENST00000427076 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
POLR2J4-202ENST00000427076 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
POLR2J4-202ENST00000427076 MIER1Q8N108 512 aa15□□□□□ -0.01
POLR2J4-202ENST00000427076 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
POLR2J4-202ENST00000427076 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
POLR2J4-202ENST00000427076 MRS2Q9HD23 443 aa14.96□□□□□ -0.01
POLR2J4-202ENST00000427076 TONSLQ96HA7 1378 aa14.95□□□□□ -0.02
POLR2J4-202ENST00000427076 TNNT3P45378 269 aaPredicted RBP14.95□□□□□ -0.02
POLR2J4-202ENST00000427076 VSIG10Q8N0Z9 540 aa14.95□□□□□ -0.02
POLR2J4-202ENST00000427076 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
POLR2J4-202ENST00000427076 NOP58Q9Y2X3 529 aaKnown RBP14.93□□□□□ -0.02
POLR2J4-202ENST00000427076 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
POLR2J4-202ENST00000427076 NPM1P06748 294 aaKnown RBP eCLIP14.92□□□□□ -0.02
POLR2J4-202ENST00000427076 KDM2AQ9Y2K7 1162 aa14.88□□□□□ -0.03
POLR2J4-202ENST00000427076 GZF1Q9H116 711 aaPredicted RBP14.85□□□□□ -0.03
POLR2J4-202ENST00000427076 SUPT16HQ9Y5B9 1047 aaKnown RBP14.84□□□□□ -0.03
POLR2J4-202ENST00000427076 MSNP26038 577 aaKnown RBP14.83□□□□□ -0.04
POLR2J4-202ENST00000427076 CLSTN1O94985 981 aa14.83□□□□□ -0.04
POLR2J4-202ENST00000427076 GOLGA6L6A8MZA4 724 aa14.82□□□□□ -0.04
POLR2J4-202ENST00000427076 NAP1L2Q9ULW6 460 aaPredicted RBP14.81□□□□□ -0.04
POLR2J4-202ENST00000427076 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
POLR2J4-202ENST00000427076 CASC1Q6TDU7 716 aa14.81□□□□□ -0.04
POLR2J4-202ENST00000427076 ANO8Q9HCE9 1232 aaPredicted RBP14.81□□□□□ -0.04
POLR2J4-202ENST00000427076 CHIC2Q9UKJ5 165 aa14.8□□□□□ -0.04
POLR2J4-202ENST00000427076 HAP1P54257 671 aaPredicted RBP14.8□□□□□ -0.04
POLR2J4-202ENST00000427076 PDE4CQ08493 712 aa14.8□□□□□ -0.04
POLR2J4-202ENST00000427076 RGS3P49796 1198 aa14.79□□□□□ -0.04
POLR2J4-202ENST00000427076 CHAF1AQ13111 956 aaPredicted RBP14.78□□□□□ -0.04
POLR2J4-202ENST00000427076 HSP90AB1P08238 724 aaKnown RBP14.78□□□□□ -0.04
POLR2J4-202ENST00000427076 DRC7Q8IY82 874 aa14.77□□□□□ -0.04
POLR2J4-202ENST00000427076 PATL2C9JE40 543 aaKnown RBP14.77□□□□□ -0.05
POLR2J4-202ENST00000427076 B4GALNT3Q6L9W6 998 aa14.74□□□□□ -0.05
POLR2J4-202ENST00000427076 PPP1R15AO75807 674 aaPredicted RBP14.73□□□□□ -0.05
POLR2J4-202ENST00000427076 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
POLR2J4-202ENST00000427076 PTMSP20962 102 aa14.73□□□□□ -0.05
POLR2J4-202ENST00000427076 FGD1P98174 961 aa14.72□□□□□ -0.05
POLR2J4-202ENST00000427076 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
POLR2J4-202ENST00000427076 NEUROD2Q15784 382 aa14.7□□□□□ -0.06
POLR2J4-202ENST00000427076 NRDCO43847 1150 aa14.7□□□□□ -0.06
POLR2J4-202ENST00000427076 HSP90AA2PQ14568 343 aaPredicted RBP14.69□□□□□ -0.06
POLR2J4-202ENST00000427076 NPHP1O15259 732 aa14.69□□□□□ -0.06
POLR2J4-202ENST00000427076 CALRP27797 417 aaKnown RBP14.68□□□□□ -0.06
POLR2J4-202ENST00000427076 BCL11BQ9C0K0 894 aaPredicted RBP14.67□□□□□ -0.06
POLR2J4-202ENST00000427076 PODXL2Q9NZ53 605 aa14.67□□□□□ -0.06
POLR2J4-202ENST00000427076 GOLGA6L4A6NEF3 574 aa14.67□□□□□ -0.06
POLR2J4-202ENST00000427076 RBM19Q9Y4C8 960 aaKnown RBP14.67□□□□□ -0.06
POLR2J4-202ENST00000427076 TAF7LQ5H9L4 462 aa14.66□□□□□ -0.06
POLR2J4-202ENST00000427076 NOC3LQ8WTT2 800 aaKnown RBP14.66□□□□□ -0.06
POLR2J4-202ENST00000427076 FRAT1Q92837 279 aaPredicted RBP14.66□□□□□ -0.06
POLR2J4-202ENST00000427076 PRM3Q9NNZ6 103 aa14.66□□□□□ -0.06
POLR2J4-202ENST00000427076 KCNJ4P48050 445 aa14.65□□□□□ -0.06
POLR2J4-202ENST00000427076 PNNQ9H307 717 aaKnown RBP14.65□□□□□ -0.06
POLR2J4-202ENST00000427076 OS9Q13438 667 aaPredicted RBP14.63□□□□□ -0.07
POLR2J4-202ENST00000427076 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
POLR2J4-202ENST00000427076 USP35Q9P2H5 1018 aa14.63□□□□□ -0.07
POLR2J4-202ENST00000427076 L1TD1Q5T7N2 865 aaKnown RBP14.6□□□□□ -0.07
POLR2J4-202ENST00000427076 HSCBQ8IWL3 235 aa14.6□□□□□ -0.07
POLR2J4-202ENST00000427076 ISY1Q9ULR0 285 aaKnown RBP14.59□□□□□ -0.07
POLR2J4-202ENST00000427076 PRKCSHP14314 528 aaPredicted RBP14.59□□□□□ -0.07
POLR2J4-202ENST00000427076 LMOD2Q6P5Q4 547 aa14.58□□□□□ -0.08
POLR2J4-202ENST00000427076 TSPY4P0CV99 314 aa14.58□□□□□ -0.08
POLR2J4-202ENST00000427076 TSPY10P0CW01 314 aa14.58□□□□□ -0.08
POLR2J4-202ENST00000427076 KCNH8Q96L42 1107 aa14.58□□□□□ -0.08
POLR2J4-202ENST00000427076 PKNOX2Q96KN3 472 aa14.57□□□□□ -0.08
POLR2J4-202ENST00000427076 SLKQ9H2G2 1235 aaPredicted RBP14.57□□□□□ -0.08
POLR2J4-202ENST00000427076 ZNF771Q7L3S4 317 aaPredicted RBP14.56□□□□□ -0.08
POLR2J4-202ENST00000427076 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
POLR2J4-202ENST00000427076 APPP05067 770 aa14.55□□□□□ -0.08
POLR2J4-202ENST00000427076 EIF4G2P78344 907 aaKnown RBP eCLIP14.54□□□□□ -0.08
POLR2J4-202ENST00000427076 KIAA2012Q0VF49 1180 aa14.54□□□□□ -0.08
POLR2J4-202ENST00000427076 GOLGA2Q08379 1002 aa14.53□□□□□ -0.08
POLR2J4-202ENST00000427076 PPP4R2Q9NY27 417 aa14.53□□□□□ -0.08
POLR2J4-202ENST00000427076 CHMP7Q8WUX9 453 aaPredicted RBP14.52□□□□□ -0.09
POLR2J4-202ENST00000427076 GNL2Q13823 731 aaKnown RBP14.52□□□□□ -0.09
POLR2J4-202ENST00000427076 CFAP53Q96M91 514 aa14.51□□□□□ -0.09
POLR2J4-202ENST00000427076 RGL3Q3MIN7 710 aa14.51□□□□□ -0.09
POLR2J4-202ENST00000427076 MAPK8IP3Q9UPT6 1336 aa14.49□□□□□ -0.09
POLR2J4-202ENST00000427076 DHX37Q8IY37 1157 aaKnown RBP14.49□□□□□ -0.09
POLR2J4-202ENST00000427076 RRP7BPQ9NSQ0 103 aa14.48□□□□□ -0.09
POLR2J4-202ENST00000427076 APBB1O00213 710 aa14.48□□□□□ -0.09
POLR2J4-202ENST00000427076 GOLGA6L1Q8N7Z2 621 aa14.48□□□□□ -0.09
POLR2J4-202ENST00000427076 FOXD4L5Q5VV16 416 aaPredicted RBP14.47□□□□□ -0.09
POLR2J4-202ENST00000427076 FOXD4L4Q8WXT5 416 aaPredicted RBP14.47□□□□□ -0.09
POLR2J4-202ENST00000427076 KNSTRNQ9Y448 316 aa14.47□□□□□ -0.09
POLR2J4-202ENST00000427076 CREBRFQ8IUR6 639 aa14.45□□□□□ -0.1
POLR2J4-202ENST00000427076 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms