RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
POLR2J4-202ENST00000427076 PELP1Q8IZL8 1130 aaKnown RBP18.55■□□□□ 0.56
POLR2J4-202ENST00000427076 MYT1Q01538 1121 aa18.52■□□□□ 0.56
POLR2J4-202ENST00000427076 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
POLR2J4-202ENST00000427076 ERICH6Q7L0X2 663 aa18.32■□□□□ 0.52
POLR2J4-202ENST00000427076 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
POLR2J4-202ENST00000427076 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
POLR2J4-202ENST00000427076 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
POLR2J4-202ENST00000427076 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
POLR2J4-202ENST00000427076 PCGF6Q9BYE7 350 aa17.6■□□□□ 0.41
POLR2J4-202ENST00000427076 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
POLR2J4-202ENST00000427076 APLP2Q06481 763 aa17.56■□□□□ 0.4
POLR2J4-202ENST00000427076 CENPBP07199 599 aaPredicted RBP17.53■□□□□ 0.4
POLR2J4-202ENST00000427076 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
POLR2J4-202ENST00000427076 NEFLP07196 543 aa17.28■□□□□ 0.36
POLR2J4-202ENST00000427076 RANGAP1P46060 587 aaPredicted RBP17.25■□□□□ 0.35
POLR2J4-202ENST00000427076 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
POLR2J4-202ENST00000427076 ATP1B4Q9UN42 357 aaPredicted RBP17.07■□□□□ 0.32
POLR2J4-202ENST00000427076 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
POLR2J4-202ENST00000427076 CNGB1Q14028 1251 aaPredicted RBP16.91■□□□□ 0.3
POLR2J4-202ENST00000427076 PPARGC1BQ86YN6 1023 aaKnown RBP16.91■□□□□ 0.3
POLR2J4-202ENST00000427076 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
POLR2J4-202ENST00000427076 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
POLR2J4-202ENST00000427076 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.28
POLR2J4-202ENST00000427076 BCANQ96GW7 911 aa16.74■□□□□ 0.27
POLR2J4-202ENST00000427076 ZNF316A6NFI3 1004 aaPredicted RBP16.68■□□□□ 0.26
POLR2J4-202ENST00000427076 NISCHQ9Y2I1 1504 aa16.66■□□□□ 0.26
POLR2J4-202ENST00000427076 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
POLR2J4-202ENST00000427076 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
POLR2J4-202ENST00000427076 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
POLR2J4-202ENST00000427076 HRCP23327 699 aa16.52■□□□□ 0.24
POLR2J4-202ENST00000427076 TRIM41Q8WV44 630 aa16.51■□□□□ 0.23
POLR2J4-202ENST00000427076 CHIC1Q5VXU3 224 aa16.47■□□□□ 0.23
POLR2J4-202ENST00000427076 GTF3C3Q9Y5Q9 886 aa16.47■□□□□ 0.23
POLR2J4-202ENST00000427076 ITGAEP38570 1179 aa16.46■□□□□ 0.22
POLR2J4-202ENST00000427076 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
POLR2J4-202ENST00000427076 BCL11AQ9H165 835 aa16.41■□□□□ 0.22
POLR2J4-202ENST00000427076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
POLR2J4-202ENST00000427076 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
POLR2J4-202ENST00000427076 ARXQ96QS3 562 aa16.24■□□□□ 0.19
POLR2J4-202ENST00000427076 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
POLR2J4-202ENST00000427076 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
POLR2J4-202ENST00000427076 NBR1Q14596 966 aa16.17■□□□□ 0.18
POLR2J4-202ENST00000427076 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
POLR2J4-202ENST00000427076 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
POLR2J4-202ENST00000427076 GLIPR1L2Q4G1C9 344 aa16.08■□□□□ 0.16
POLR2J4-202ENST00000427076 CDK11AQ9UQ88 783 aaPredicted RBP16.08■□□□□ 0.16
POLR2J4-202ENST00000427076 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
POLR2J4-202ENST00000427076 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
POLR2J4-202ENST00000427076 RTN4Q9NQC3 1192 aaKnown RBP15.99■□□□□ 0.15
POLR2J4-202ENST00000427076 CANXP27824 592 aaKnown RBP15.91■□□□□ 0.14
POLR2J4-202ENST00000427076 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
POLR2J4-202ENST00000427076 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
POLR2J4-202ENST00000427076 ANP32AP39687 249 aaKnown RBP15.85■□□□□ 0.13
POLR2J4-202ENST00000427076 ZNF326Q5BKZ1 582 aaKnown RBP15.82■□□□□ 0.12
POLR2J4-202ENST00000427076 ANP32BQ92688 251 aaKnown RBP15.81■□□□□ 0.12
POLR2J4-202ENST00000427076 ACIN1Q9UKV3 1341 aaKnown RBP15.79■□□□□ 0.12
POLR2J4-202ENST00000427076 TRIM52Q96A61 297 aa15.79■□□□□ 0.12
POLR2J4-202ENST00000427076 FAM50AQ14320 339 aaKnown RBP15.76■□□□□ 0.11
POLR2J4-202ENST00000427076 ANP32CO43423 234 aa15.76■□□□□ 0.11
POLR2J4-202ENST00000427076 FKBP8Q14318 412 aa15.73■□□□□ 0.11
POLR2J4-202ENST00000427076 HSP90AA1P07900 732 aaKnown RBP15.71■□□□□ 0.11
POLR2J4-202ENST00000427076 ARID4BQ4LE39 1312 aaPredicted RBP15.65■□□□□ 0.1
POLR2J4-202ENST00000427076 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
POLR2J4-202ENST00000427076 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.62■□□□□ 0.09
POLR2J4-202ENST00000427076 IRX6P78412 446 aaPredicted RBP15.59■□□□□ 0.09
POLR2J4-202ENST00000427076 TPRNQ4KMQ1 711 aa15.59■□□□□ 0.09
POLR2J4-202ENST00000427076 NEFMP07197 916 aa15.55■□□□□ 0.08
POLR2J4-202ENST00000427076 ARID3AQ99856 593 aa15.54■□□□□ 0.08
POLR2J4-202ENST00000427076 NAP1L5Q96NT1 182 aaPredicted RBP15.54■□□□□ 0.08
POLR2J4-202ENST00000427076 FBLN2P98095 1184 aa15.51■□□□□ 0.07
POLR2J4-202ENST00000427076 SALL2Q9Y467 1007 aaPredicted RBP15.5■□□□□ 0.07
POLR2J4-202ENST00000427076 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
POLR2J4-202ENST00000427076 UPF2Q9HAU5 1272 aaKnown RBP15.47■□□□□ 0.07
POLR2J4-202ENST00000427076 CDK11BP21127 795 aaKnown RBP15.46■□□□□ 0.07
POLR2J4-202ENST00000427076 ZBTB7CA1YPR0 619 aa15.46■□□□□ 0.07
POLR2J4-202ENST00000427076 TNNT2P45379 298 aaPredicted RBP15.41■□□□□ 0.06
POLR2J4-202ENST00000427076 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
POLR2J4-202ENST00000427076 ANP32EQ9BTT0 268 aa15.38■□□□□ 0.05
POLR2J4-202ENST00000427076 SENP3-EIF4A1A0A087X0R7 540 aa15.37■□□□□ 0.05
POLR2J4-202ENST00000427076 CCDC136Q96JN2 1154 aa15.36■□□□□ 0.05
POLR2J4-202ENST00000427076 LAS1LQ9Y4W2 734 aaKnown RBP15.34■□□□□ 0.05
POLR2J4-202ENST00000427076 TRIM44Q96DX7 344 aaPredicted RBP15.34■□□□□ 0.05
POLR2J4-202ENST00000427076 DNTTIP2Q5QJE6 756 aaKnown RBP15.33■□□□□ 0.04
POLR2J4-202ENST00000427076 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.04
POLR2J4-202ENST00000427076 HNRNPUQ00839 825 aaKnown RBP eCLIP15.31■□□□□ 0.04
POLR2J4-202ENST00000427076 TULP1O00294 542 aaPredicted RBP15.3■□□□□ 0.04
POLR2J4-202ENST00000427076 NCLP19338 710 aaKnown RBP15.3■□□□□ 0.04
POLR2J4-202ENST00000427076 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
POLR2J4-202ENST00000427076 ESF1Q9H501 851 aaKnown RBP15.28■□□□□ 0.04
POLR2J4-202ENST00000427076 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
POLR2J4-202ENST00000427076 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
POLR2J4-202ENST00000427076 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
POLR2J4-202ENST00000427076 P3H3Q8IVL6 736 aa15.22■□□□□ 0.03
POLR2J4-202ENST00000427076 PTMAP06454 111 aaKnown RBP15.21■□□□□ 0.03
POLR2J4-202ENST00000427076 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
POLR2J4-202ENST00000427076 A0A0G2JS52 829 aa15.18■□□□□ 0.02
POLR2J4-202ENST00000427076 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.17■□□□□ 0.02
POLR2J4-202ENST00000427076 PLCB2Q00722 1185 aa15.16■□□□□ 0.02
POLR2J4-202ENST00000427076 DEKP35659 375 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms