RNA–Protein interactions for RNA: ENST00000425515.6

VNN3-207, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-207ENST00000425515 HNRNPUL2Q1KMD3 747 aaKnown RBP9.5□□□□□ -0.89
VNN3-207ENST00000425515 BCL11AQ9H165 835 aa9.5□□□□□ -0.89
VNN3-207ENST00000425515 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
VNN3-207ENST00000425515 TRHP20396 242 aaPredicted RBP9.48□□□□□ -0.89
VNN3-207ENST00000425515 ANP32EQ9BTT0 268 aa9.48□□□□□ -0.89
VNN3-207ENST00000425515 CCER1Q8TC90 406 aaPredicted RBP9.47□□□□□ -0.89
VNN3-207ENST00000425515 ZNF219Q9P2Y4 722 aaPredicted RBP9.47□□□□□ -0.89
VNN3-207ENST00000425515 SAMD1Q6SPF0 538 aaPredicted RBP9.44□□□□□ -0.9
VNN3-207ENST00000425515 WRNQ14191 1432 aaPredicted RBP eCLIP9.43□□□□□ -0.9
VNN3-207ENST00000425515 ABCC8Q09428 1581 aa9.43□□□□□ -0.9
VNN3-207ENST00000425515 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
VNN3-207ENST00000425515 NCAPD3P42695 1498 aa9.41□□□□□ -0.9
VNN3-207ENST00000425515 ABCB7O75027 752 aa9.41□□□□□ -0.9
VNN3-207ENST00000425515 HMGXB3Q12766 1538 aa9.4□□□□□ -0.9
VNN3-207ENST00000425515 PODXL2Q9NZ53 605 aa9.39□□□□□ -0.91
VNN3-207ENST00000425515 TNIKQ9UKE5 1360 aa9.38□□□□□ -0.91
VNN3-207ENST00000425515 VSIG10Q8N0Z9 540 aa9.37□□□□□ -0.91
VNN3-207ENST00000425515 SOGA1O94964 1423 aa9.36□□□□□ -0.91
VNN3-207ENST00000425515 GOLGA3Q08378 1498 aa9.34□□□□□ -0.91
VNN3-207ENST00000425515 MYCNP04198 464 aaPredicted RBP9.33□□□□□ -0.92
VNN3-207ENST00000425515 UBTFP17480 764 aaKnown RBP9.33□□□□□ -0.92
VNN3-207ENST00000425515 CEP164Q9UPV0 1460 aa9.32□□□□□ -0.92
VNN3-207ENST00000425515 CEP162Q5TB80 1403 aa9.31□□□□□ -0.92
VNN3-207ENST00000425515 SYNJ1O43426 1573 aa9.29□□□□□ -0.92
VNN3-207ENST00000425515 TOP2BQ02880 1626 aa9.28□□□□□ -0.92
VNN3-207ENST00000425515 KIF21BO75037 1637 aa9.28□□□□□ -0.92
VNN3-207ENST00000425515 SUPT16HQ9Y5B9 1047 aaKnown RBP9.27□□□□□ -0.92
VNN3-207ENST00000425515 FKBP8Q14318 412 aa9.27□□□□□ -0.93
VNN3-207ENST00000425515 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
VNN3-207ENST00000425515 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
VNN3-207ENST00000425515 CFTRP13569 1480 aa9.26□□□□□ -0.93
VNN3-207ENST00000425515 RUSC2Q8N2Y8 1516 aa9.26□□□□□ -0.93
VNN3-207ENST00000425515 POTEHQ6S545 545 aa9.26□□□□□ -0.93
VNN3-207ENST00000425515 TMEM132AQ24JP5 1023 aa9.25□□□□□ -0.93
VNN3-207ENST00000425515 YTHDC1Q96MU7 727 aaKnown RBP9.25□□□□□ -0.93
VNN3-207ENST00000425515 MIER1Q8N108 512 aa9.24□□□□□ -0.93
VNN3-207ENST00000425515 KLHL34Q8N239 644 aa9.24□□□□□ -0.93
VNN3-207ENST00000425515 BIVM-ERCC5R4GMW8 1640 aa9.24□□□□□ -0.93
VNN3-207ENST00000425515 C14orf37Q86TY3 774 aa9.24□□□□□ -0.93
VNN3-207ENST00000425515 ATXN8OSP0DMR3 200 aa9.21□□□□□ -0.94
VNN3-207ENST00000425515 CADPSQ9ULU8 1353 aa9.21□□□□□ -0.94
VNN3-207ENST00000425515 POLA2Q14181 598 aa9.2□□□□□ -0.94
VNN3-207ENST00000425515 NPM2Q86SE8 214 aaKnown RBP9.2□□□□□ -0.94
VNN3-207ENST00000425515 CLIP1P30622 1438 aa9.2□□□□□ -0.94
VNN3-207ENST00000425515 KIF27Q86VH2 1401 aa9.2□□□□□ -0.94
VNN3-207ENST00000425515 ERICH3Q5RHP9 1530 aa9.19□□□□□ -0.94
VNN3-207ENST00000425515 RBM42Q9BTD8 480 aaKnown RBP9.17□□□□□ -0.94
VNN3-207ENST00000425515 FBXO3Q9UK99 471 aa9.17□□□□□ -0.94
VNN3-207ENST00000425515 CUX1P39880 1505 aa9.16□□□□□ -0.94
VNN3-207ENST00000425515 VPS8Q8N3P4 1428 aa9.16□□□□□ -0.94
VNN3-207ENST00000425515 PRXQ9BXM0 1461 aa9.16□□□□□ -0.94
VNN3-207ENST00000425515 RAPGEF2Q9Y4G8 1499 aa9.16□□□□□ -0.94
VNN3-207ENST00000425515 PRDM2Q13029 1718 aa9.15□□□□□ -0.94
VNN3-207ENST00000425515 CC2D2AQ9P2K1 1620 aa9.14□□□□□ -0.95
VNN3-207ENST00000425515 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
VNN3-207ENST00000425515 ATF5Q9Y2D1 282 aaPredicted RBP9.09□□□□□ -0.95
VNN3-207ENST00000425515 FANCD2Q9BXW9 1451 aa9.07□□□□□ -0.96
VNN3-207ENST00000425515 CUX2O14529 1486 aa9.07□□□□□ -0.96
VNN3-207ENST00000425515 FANCIQ9NVI1 1328 aa9.06□□□□□ -0.96
VNN3-207ENST00000425515 KDM2AQ9Y2K7 1162 aa9.06□□□□□ -0.96
VNN3-207ENST00000425515 IGF1RP08069 1367 aa9.05□□□□□ -0.96
VNN3-207ENST00000425515 ERICH6BQ5W0A0 696 aa9.05□□□□□ -0.96
VNN3-207ENST00000425515 RBM19Q9Y4C8 960 aaKnown RBP9.05□□□□□ -0.96
VNN3-207ENST00000425515 FGD5Q6ZNL6 1462 aa9.05□□□□□ -0.96
VNN3-207ENST00000425515 CARMIL1Q5VZK9 1371 aa9.04□□□□□ -0.96
VNN3-207ENST00000425515 ZBTB12Q9Y330 459 aaPredicted RBP9.04□□□□□ -0.96
VNN3-207ENST00000425515 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
VNN3-207ENST00000425515 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
VNN3-207ENST00000425515 NEFLP07196 543 aa9.01□□□□□ -0.97
VNN3-207ENST00000425515 PDS5BQ9NTI5 1447 aa9.01□□□□□ -0.97
VNN3-207ENST00000425515 ARAP1Q96P48 1450 aa9.01□□□□□ -0.97
VNN3-207ENST00000425515 ABCA10Q8WWZ4 1543 aa9□□□□□ -0.97
VNN3-207ENST00000425515 TOPBP1Q92547 1522 aa8.98□□□□□ -0.97
VNN3-207ENST00000425515 ARHGAP35Q9NRY4 1499 aa8.97□□□□□ -0.97
VNN3-207ENST00000425515 FHAD1B1AJZ9 1412 aa8.97□□□□□ -0.97
VNN3-207ENST00000425515 CHRDL2Q6WN34 429 aa8.97□□□□□ -0.97
VNN3-207ENST00000425515 MAP3K1Q13233 1512 aa8.97□□□□□ -0.97
VNN3-207ENST00000425515 POLA1P09884 1462 aaPredicted RBP8.97□□□□□ -0.97
VNN3-207ENST00000425515 FBLN2P98095 1184 aa8.96□□□□□ -0.97
VNN3-207ENST00000425515 CUL7Q14999 1698 aa8.94□□□□□ -0.98
VNN3-207ENST00000425515 AKT1S1Q96B36 256 aa8.93□□□□□ -0.98
VNN3-207ENST00000425515 NESP48681 1621 aa8.93□□□□□ -0.98
VNN3-207ENST00000425515 RRBP1Q9P2E9 1410 aaKnown RBP8.93□□□□□ -0.98
VNN3-207ENST00000425515 RAD54L2Q9Y4B4 1467 aa8.92□□□□□ -0.98
VNN3-207ENST00000425515 EFCAB5A4FU69 1503 aa8.92□□□□□ -0.98
VNN3-207ENST00000425515 OSCARQ8IYS5 282 aa8.91□□□□□ -0.98
VNN3-207ENST00000425515 NBR1Q14596 966 aa8.91□□□□□ -0.98
VNN3-207ENST00000425515 KANK4Q5T7N3 995 aaPredicted RBP8.91□□□□□ -0.98
VNN3-207ENST00000425515 CDK11AQ9UQ88 783 aaPredicted RBP8.9□□□□□ -0.98
VNN3-207ENST00000425515 CCNB3Q8WWL7 1395 aa8.9□□□□□ -0.98
VNN3-207ENST00000425515 URB2Q14146 1524 aaKnown RBP8.89□□□□□ -0.99
VNN3-207ENST00000425515 DEKP35659 375 aaKnown RBP8.89□□□□□ -0.99
VNN3-207ENST00000425515 CCER2I3L3R5 266 aa8.89□□□□□ -0.99
VNN3-207ENST00000425515 DHX57Q6P158 1386 aaKnown RBP8.89□□□□□ -0.99
VNN3-207ENST00000425515 AQRO60306 1485 aaKnown RBP eCLIP8.88□□□□□ -0.99
VNN3-207ENST00000425515 GAPVD1Q14C86 1478 aa8.88□□□□□ -0.99
VNN3-207ENST00000425515 FMN1Q68DA7 1419 aa8.88□□□□□ -0.99
VNN3-207ENST00000425515 TIAM1Q13009 1591 aa8.87□□□□□ -0.99
VNN3-207ENST00000425515 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.87□□□□□ -0.99
VNN3-207ENST00000425515 LRRC9Q6ZRR7 1453 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms