RNA–Protein interactions for RNA: ENST00000425515.6

VNN3-207, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-207ENST00000425515 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
VNN3-207ENST00000425515 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
VNN3-207ENST00000425515 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
VNN3-207ENST00000425515 PHF23Q9BUL5 403 aaPredicted RBP13.55□□□□□ -0.24
VNN3-207ENST00000425515 FOXD1Q16676 465 aa12.8□□□□□ -0.36
VNN3-207ENST00000425515 NISCHQ9Y2I1 1504 aa12.74□□□□□ -0.37
VNN3-207ENST00000425515 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
VNN3-207ENST00000425515 MSH5O43196 834 aa12.04□□□□□ -0.48
VNN3-207ENST00000425515 PIAS4Q8N2W9 510 aaPredicted RBP11.98□□□□□ -0.49
VNN3-207ENST00000425515 PPP6R1Q9UPN7 881 aa11.91□□□□□ -0.5
VNN3-207ENST00000425515 ADRA2BP18089 450 aa11.9□□□□□ -0.51
VNN3-207ENST00000425515 POTEDQ86YR6 584 aa11.81□□□□□ -0.52
VNN3-207ENST00000425515 SLC24A1O60721 1099 aa11.65□□□□□ -0.54
VNN3-207ENST00000425515 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
VNN3-207ENST00000425515 CCDC180Q9P1Z9 1646 aa10.96□□□□□ -0.66
VNN3-207ENST00000425515 MAPK8IP2Q13387 824 aaPredicted RBP10.93□□□□□ -0.66
VNN3-207ENST00000425515 SCAF1Q9H7N4 1312 aaKnown RBP10.92□□□□□ -0.66
VNN3-207ENST00000425515 PELP1Q8IZL8 1130 aaKnown RBP10.88□□□□□ -0.67
VNN3-207ENST00000425515 DMRT2Q9Y5R5 561 aa10.88□□□□□ -0.67
VNN3-207ENST00000425515 ZCCHC6Q5VYS8 1495 aaKnown RBP10.75□□□□□ -0.69
VNN3-207ENST00000425515 KCNA4P22459 653 aa10.69□□□□□ -0.7
VNN3-207ENST00000425515 HRCP23327 699 aa10.68□□□□□ -0.7
VNN3-207ENST00000425515 MYT1Q01538 1121 aa10.65□□□□□ -0.7
VNN3-207ENST00000425515 PPP4R3CPQ6ZMV5 832 aa10.65□□□□□ -0.71
VNN3-207ENST00000425515 DCAF1Q9Y4B6 1507 aa10.58□□□□□ -0.72
VNN3-207ENST00000425515 SHROOM4Q9ULL8 1493 aa10.57□□□□□ -0.72
VNN3-207ENST00000425515 AMER1Q5JTC6 1135 aaPredicted RBP10.52□□□□□ -0.72
VNN3-207ENST00000425515 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.72
VNN3-207ENST00000425515 DCAF8L1A6NGE4 600 aa10.5□□□□□ -0.73
VNN3-207ENST00000425515 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
VNN3-207ENST00000425515 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
VNN3-207ENST00000425515 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
VNN3-207ENST00000425515 HOXD11P31277 338 aaPredicted RBP10.45□□□□□ -0.74
VNN3-207ENST00000425515 NCBP3Q53F19 620 aaKnown RBP10.44□□□□□ -0.74
VNN3-207ENST00000425515 RNF216Q9NWF9 866 aaPredicted RBP10.38□□□□□ -0.75
VNN3-207ENST00000425515 SUPT5HO00267 1087 aaKnown RBP10.37□□□□□ -0.75
VNN3-207ENST00000425515 CACNB1Q02641 598 aaPredicted RBP10.37□□□□□ -0.75
VNN3-207ENST00000425515 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
VNN3-207ENST00000425515 CSRNP3Q8WYN3 585 aa10.29□□□□□ -0.76
VNN3-207ENST00000425515 RNF39Q9H2S5 420 aa10.24□□□□□ -0.77
VNN3-207ENST00000425515 PCGF6Q9BYE7 350 aa10.2□□□□□ -0.78
VNN3-207ENST00000425515 NACADO15069 1562 aa10.19□□□□□ -0.78
VNN3-207ENST00000425515 ZEB1P37275 1124 aaPredicted RBP10.19□□□□□ -0.78
VNN3-207ENST00000425515 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
VNN3-207ENST00000425515 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
VNN3-207ENST00000425515 ABCC9O60706 1549 aa10.11□□□□□ -0.79
VNN3-207ENST00000425515 TTBK1Q5TCY1 1321 aaPredicted RBP10.11□□□□□ -0.79
VNN3-207ENST00000425515 C1QBPQ07021 282 aaKnown RBP10.1□□□□□ -0.79
VNN3-207ENST00000425515 DNAJC5BQ9UF47 199 aa10.1□□□□□ -0.79
VNN3-207ENST00000425515 SCRIBQ14160 1630 aa10.09□□□□□ -0.79
VNN3-207ENST00000425515 NPM3O75607 178 aaKnown RBP10.07□□□□□ -0.8
VNN3-207ENST00000425515 TRIM26Q12899 539 aaPredicted RBP10.04□□□□□ -0.8
VNN3-207ENST00000425515 RB1CC1Q8TDY2 1594 aa10.03□□□□□ -0.8
VNN3-207ENST00000425515 ARXQ96QS3 562 aa10.02□□□□□ -0.81
VNN3-207ENST00000425515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
VNN3-207ENST00000425515 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
VNN3-207ENST00000425515 ZBTB22O15209 634 aa9.95□□□□□ -0.82
VNN3-207ENST00000425515 PRKCSHP14314 528 aaPredicted RBP9.93□□□□□ -0.82
VNN3-207ENST00000425515 ACIN1Q9UKV3 1341 aaKnown RBP9.9□□□□□ -0.82
VNN3-207ENST00000425515 CENPBP07199 599 aaPredicted RBP9.86□□□□□ -0.83
VNN3-207ENST00000425515 BAZ1AQ9NRL2 1556 aaPredicted RBP9.84□□□□□ -0.83
VNN3-207ENST00000425515 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
VNN3-207ENST00000425515 BCANQ96GW7 911 aa9.81□□□□□ -0.84
VNN3-207ENST00000425515 MROH2BQ7Z745 1585 aa9.81□□□□□ -0.84
VNN3-207ENST00000425515 TAOK2Q9UL54 1235 aa9.8□□□□□ -0.84
VNN3-207ENST00000425515 TRIM41Q8WV44 630 aa9.78□□□□□ -0.84
VNN3-207ENST00000425515 RANGAP1P46060 587 aaPredicted RBP9.78□□□□□ -0.84
VNN3-207ENST00000425515 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
VNN3-207ENST00000425515 U3KPZ7 1027 aaPredicted RBP9.75□□□□□ -0.85
VNN3-207ENST00000425515 NEUROD1Q13562 356 aa9.73□□□□□ -0.85
VNN3-207ENST00000425515 GTF3C3Q9Y5Q9 886 aa9.73□□□□□ -0.85
VNN3-207ENST00000425515 WIZO95785 1651 aa9.73□□□□□ -0.85
VNN3-207ENST00000425515 HOMEZQ8IX15 550 aa9.72□□□□□ -0.85
VNN3-207ENST00000425515 SMARCA4P51532 1647 aa9.71□□□□□ -0.86
VNN3-207ENST00000425515 ERICH6Q7L0X2 663 aa9.7□□□□□ -0.86
VNN3-207ENST00000425515 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
VNN3-207ENST00000425515 APLP2Q06481 763 aa9.69□□□□□ -0.86
VNN3-207ENST00000425515 UNC13AQ9UPW8 1703 aa9.69□□□□□ -0.86
VNN3-207ENST00000425515 LOC105371045A0A1W2PR82 267 aa9.67□□□□□ -0.86
VNN3-207ENST00000425515 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
VNN3-207ENST00000425515 CAPN15O75808 1086 aa9.66□□□□□ -0.86
VNN3-207ENST00000425515 SPINK5Q9NQ38 1064 aaPredicted RBP9.63□□□□□ -0.87
VNN3-207ENST00000425515 BICRAQ9NZM4 1560 aa9.63□□□□□ -0.87
VNN3-207ENST00000425515 CLSPNQ9HAW4 1339 aa9.63□□□□□ -0.87
VNN3-207ENST00000425515 TPRNQ4KMQ1 711 aa9.62□□□□□ -0.87
VNN3-207ENST00000425515 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
VNN3-207ENST00000425515 SLC4A2P04920 1241 aa9.61□□□□□ -0.87
VNN3-207ENST00000425515 PLCB2Q00722 1185 aa9.6□□□□□ -0.87
VNN3-207ENST00000425515 DIEXFQ68CQ4 756 aaKnown RBP9.6□□□□□ -0.87
VNN3-207ENST00000425515 PEG3Q9GZU2 1588 aa9.6□□□□□ -0.87
VNN3-207ENST00000425515 CCDC88BA6NC98 1476 aa9.6□□□□□ -0.87
VNN3-207ENST00000425515 FOXD4L1Q9NU39 408 aa9.6□□□□□ -0.87
VNN3-207ENST00000425515 SMARCA2P51531 1590 aa9.57□□□□□ -0.88
VNN3-207ENST00000425515 DSG3P32926 999 aa9.57□□□□□ -0.88
VNN3-207ENST00000425515 EIF4G1Q04637 1599 aaKnown RBP9.56□□□□□ -0.88
VNN3-207ENST00000425515 FAM9AQ8IZU1 332 aaPredicted RBP9.55□□□□□ -0.88
VNN3-207ENST00000425515 HAP1P54257 671 aaPredicted RBP9.52□□□□□ -0.89
VNN3-207ENST00000425515 ATAD2BQ9ULI0 1458 aa9.51□□□□□ -0.89
VNN3-207ENST00000425515 EEA1Q15075 1411 aa9.51□□□□□ -0.89
VNN3-207ENST00000425515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms