RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 FYCO1Q9BQS8 1478 aa7.33□□□□□ -1.24
CKS1BP6-201ENST00000424932 THOC2Q8NI27 1593 aaKnown RBP7.33□□□□□ -1.24
CKS1BP6-201ENST00000424932 RAD54L2Q9Y4B4 1467 aa7.32□□□□□ -1.24
CKS1BP6-201ENST00000424932 CLSPNQ9HAW4 1339 aa7.31□□□□□ -1.24
CKS1BP6-201ENST00000424932 LRRC9Q6ZRR7 1453 aa7.3□□□□□ -1.24
CKS1BP6-201ENST00000424932 LRRIQ1Q96JM4 1722 aa7.3□□□□□ -1.24
CKS1BP6-201ENST00000424932 GAPVD1Q14C86 1478 aa7.29□□□□□ -1.24
CKS1BP6-201ENST00000424932 ADAMTS12P58397 1594 aa7.29□□□□□ -1.24
CKS1BP6-201ENST00000424932 TTBK1Q5TCY1 1321 aaPredicted RBP7.28□□□□□ -1.24
CKS1BP6-201ENST00000424932 CASKIN1Q8WXD9 1431 aa7.28□□□□□ -1.24
CKS1BP6-201ENST00000424932 CCNB3Q8WWL7 1395 aa7.28□□□□□ -1.24
CKS1BP6-201ENST00000424932 SNAPC4Q5SXM2 1469 aa7.28□□□□□ -1.24
CKS1BP6-201ENST00000424932 WDR62O43379 1518 aa7.27□□□□□ -1.25
CKS1BP6-201ENST00000424932 FMN1Q68DA7 1419 aa7.27□□□□□ -1.25
CKS1BP6-201ENST00000424932 MRC2Q9UBG0 1479 aa7.26□□□□□ -1.25
CKS1BP6-201ENST00000424932 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
CKS1BP6-201ENST00000424932 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.25□□□□□ -1.25
CKS1BP6-201ENST00000424932 DHX57Q6P158 1386 aaKnown RBP7.24□□□□□ -1.25
CKS1BP6-201ENST00000424932 IQGAP2Q13576 1575 aa7.24□□□□□ -1.25
CKS1BP6-201ENST00000424932 SUPT6HQ7KZ85 1726 aaKnown RBP7.24□□□□□ -1.25
CKS1BP6-201ENST00000424932 GRIN2BQ13224 1484 aa7.24□□□□□ -1.25
CKS1BP6-201ENST00000424932 EHBP1L1Q8N3D4 1523 aa7.23□□□□□ -1.25
CKS1BP6-201ENST00000424932 HNRNPUL2Q1KMD3 747 aaKnown RBP7.23□□□□□ -1.25
CKS1BP6-201ENST00000424932 FHOD3Q2V2M9 1422 aa7.23□□□□□ -1.25
CKS1BP6-201ENST00000424932 HECW1Q76N89 1606 aa7.23□□□□□ -1.25
CKS1BP6-201ENST00000424932 RANGAP1P46060 587 aaPredicted RBP7.22□□□□□ -1.25
CKS1BP6-201ENST00000424932 CCDC18Q5T9S5 1454 aa7.21□□□□□ -1.26
CKS1BP6-201ENST00000424932 IFT140Q96RY7 1462 aa7.21□□□□□ -1.26
CKS1BP6-201ENST00000424932 ARHGEF11O15085 1522 aa7.21□□□□□ -1.26
CKS1BP6-201ENST00000424932 UGGT2Q9NYU1 1516 aa7.21□□□□□ -1.26
CKS1BP6-201ENST00000424932 MAPKBP1O60336 1514 aa7.2□□□□□ -1.26
CKS1BP6-201ENST00000424932 EIF4G3O43432 1585 aaKnown RBP7.2□□□□□ -1.26
CKS1BP6-201ENST00000424932 PHLDB1Q86UU1 1377 aa7.2□□□□□ -1.26
CKS1BP6-201ENST00000424932 GCC2Q8IWJ2 1684 aa7.19□□□□□ -1.26
CKS1BP6-201ENST00000424932 ZNF316A6NFI3 1004 aaPredicted RBP7.19□□□□□ -1.26
CKS1BP6-201ENST00000424932 TDRD9Q8NDG6 1382 aaKnown RBP7.19□□□□□ -1.26
CKS1BP6-201ENST00000424932 DIEXFQ68CQ4 756 aaKnown RBP7.18□□□□□ -1.26
CKS1BP6-201ENST00000424932 FGD6Q6ZV73 1430 aa7.18□□□□□ -1.26
CKS1BP6-201ENST00000424932 RAB3GAP2Q9H2M9 1393 aa7.17□□□□□ -1.26
CKS1BP6-201ENST00000424932 SETD5Q9C0A6 1442 aa7.17□□□□□ -1.26
CKS1BP6-201ENST00000424932 KIAA0556O60303 1618 aa7.16□□□□□ -1.26
CKS1BP6-201ENST00000424932 PTPN23Q9H3S7 1636 aa7.16□□□□□ -1.26
CKS1BP6-201ENST00000424932 MYOM3Q5VTT5 1437 aa7.15□□□□□ -1.27
CKS1BP6-201ENST00000424932 TCOF1Q13428 1488 aaKnown RBP7.15□□□□□ -1.27
CKS1BP6-201ENST00000424932 NCOA2Q15596 1464 aa7.15□□□□□ -1.27
CKS1BP6-201ENST00000424932 MAGI1Q96QZ7 1491 aaPredicted RBP7.15□□□□□ -1.27
CKS1BP6-201ENST00000424932 MAGI3Q5TCQ9 1506 aa7.15□□□□□ -1.27
CKS1BP6-201ENST00000424932 AKNAQ7Z591 1439 aa7.14□□□□□ -1.27
CKS1BP6-201ENST00000424932 KIAA0586Q9BVV6 1533 aa7.14□□□□□ -1.27
CKS1BP6-201ENST00000424932 DNAJC5BQ9UF47 199 aa7.14□□□□□ -1.27
CKS1BP6-201ENST00000424932 ADCY10Q96PN6 1610 aa7.13□□□□□ -1.27
CKS1BP6-201ENST00000424932 EPRSP07814 1512 aaKnown RBP7.13□□□□□ -1.27
CKS1BP6-201ENST00000424932 GRIN2AQ12879 1464 aa7.13□□□□□ -1.27
CKS1BP6-201ENST00000424932 RAPGEF6Q8TEU7 1601 aa7.12□□□□□ -1.27
CKS1BP6-201ENST00000424932 HFM1A2PYH4 1435 aa7.12□□□□□ -1.27
CKS1BP6-201ENST00000424932 MTUS2Q5JR59 1369 aa7.12□□□□□ -1.27
CKS1BP6-201ENST00000424932 ITSN2Q9NZM3 1697 aa7.12□□□□□ -1.27
CKS1BP6-201ENST00000424932 DISP1Q96F81 1524 aa7.11□□□□□ -1.27
CKS1BP6-201ENST00000424932 ZNF608Q9ULD9 1512 aaPredicted RBP7.11□□□□□ -1.27
CKS1BP6-201ENST00000424932 MIA2Q96PC5 1412 aa7.1□□□□□ -1.27
CKS1BP6-201ENST00000424932 CEP170Q5SW79 1584 aa7.1□□□□□ -1.27
CKS1BP6-201ENST00000424932 SYNJ2O15056 1496 aa7.1□□□□□ -1.27
CKS1BP6-201ENST00000424932 ADGBQ8N7X0 1667 aa7.09□□□□□ -1.27
CKS1BP6-201ENST00000424932 DNMT1P26358 1616 aaKnown RBP7.09□□□□□ -1.27
CKS1BP6-201ENST00000424932 P3H3Q8IVL6 736 aa7.09□□□□□ -1.27
CKS1BP6-201ENST00000424932 TIMELESSQ9UNS1 1208 aa7.09□□□□□ -1.27
CKS1BP6-201ENST00000424932 CROCC2H7BZ55 1655 aa7.09□□□□□ -1.27
CKS1BP6-201ENST00000424932 UACAQ9BZF9 1416 aa7.09□□□□□ -1.28
CKS1BP6-201ENST00000424932 ACIN1Q9UKV3 1341 aaKnown RBP7.08□□□□□ -1.28
CKS1BP6-201ENST00000424932 CDK13Q14004 1512 aaKnown RBP7.08□□□□□ -1.28
CKS1BP6-201ENST00000424932 CENPBP07199 599 aaPredicted RBP7.08□□□□□ -1.28
CKS1BP6-201ENST00000424932 NUP160Q12769 1436 aa7.08□□□□□ -1.28
CKS1BP6-201ENST00000424932 NAIPQ13075 1403 aa7.08□□□□□ -1.28
CKS1BP6-201ENST00000424932 NUP153P49790 1475 aaKnown RBP7.07□□□□□ -1.28
CKS1BP6-201ENST00000424932 ERCC6Q03468 1493 aa7.07□□□□□ -1.28
CKS1BP6-201ENST00000424932 PTPRKQ15262 1439 aa7.07□□□□□ -1.28
CKS1BP6-201ENST00000424932 SCAF1Q9H7N4 1312 aaKnown RBP7.06□□□□□ -1.28
CKS1BP6-201ENST00000424932 FAM50AQ14320 339 aaKnown RBP7.06□□□□□ -1.28
CKS1BP6-201ENST00000424932 ABCA8O94911 1581 aa7.04□□□□□ -1.28
CKS1BP6-201ENST00000424932 CDC42BPAQ5VT25 1732 aa7.04□□□□□ -1.28
CKS1BP6-201ENST00000424932 KDM5BQ9UGL1 1544 aa7.03□□□□□ -1.28
CKS1BP6-201ENST00000424932 ITGAEP38570 1179 aa7.03□□□□□ -1.28
CKS1BP6-201ENST00000424932 NEUROD1Q13562 356 aa7.03□□□□□ -1.28
CKS1BP6-201ENST00000424932 POLR1AO95602 1720 aaPredicted RBP7.03□□□□□ -1.28
CKS1BP6-201ENST00000424932 ROCK1Q13464 1354 aa7.03□□□□□ -1.28
CKS1BP6-201ENST00000424932 KDM6BO15054 1643 aa7.02□□□□□ -1.29
CKS1BP6-201ENST00000424932 SHROOM2Q13796 1616 aa7.02□□□□□ -1.29
CKS1BP6-201ENST00000424932 ATP1B4Q9UN42 357 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP6-201ENST00000424932 TROQ12816 1431 aaPredicted RBP7.01□□□□□ -1.29
CKS1BP6-201ENST00000424932 KIF14Q15058 1648 aa7.01□□□□□ -1.29
CKS1BP6-201ENST00000424932 CHD1O14646 1710 aa7.01□□□□□ -1.29
CKS1BP6-201ENST00000424932 DENND4BO75064 1496 aaPredicted RBP7.01□□□□□ -1.29
CKS1BP6-201ENST00000424932 MIER1Q8N108 512 aa7.01□□□□□ -1.29
CKS1BP6-201ENST00000424932 DAPK1P53355 1430 aa7.01□□□□□ -1.29
CKS1BP6-201ENST00000424932 CARMIL2Q6F5E8 1435 aa7.01□□□□□ -1.29
CKS1BP6-201ENST00000424932 ADGRL2O95490 1459 aa7□□□□□ -1.29
CKS1BP6-201ENST00000424932 CAMSAP2Q08AD1 1489 aa6.98□□□□□ -1.29
CKS1BP6-201ENST00000424932 SHANK2Q9UPX8 1470 aa6.98□□□□□ -1.29
CKS1BP6-201ENST00000424932 PREX2Q70Z35 1606 aa6.98□□□□□ -1.29
CKS1BP6-201ENST00000424932 ABCC5O15440 1437 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms