RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 NISCHQ9Y2I1 1504 aa10.55□□□□□ -0.72
CKS1BP6-201ENST00000424932 CCDC180Q9P1Z9 1646 aa9.22□□□□□ -0.93
CKS1BP6-201ENST00000424932 ZCCHC6Q5VYS8 1495 aaKnown RBP8.95□□□□□ -0.98
CKS1BP6-201ENST00000424932 DCAF1Q9Y4B6 1507 aa8.8□□□□□ -1
CKS1BP6-201ENST00000424932 MYO15BQ96JP2 1530 aa8.61□□□□□ -1.03
CKS1BP6-201ENST00000424932 SHROOM4Q9ULL8 1493 aa8.61□□□□□ -1.03
CKS1BP6-201ENST00000424932 ABCC9O60706 1549 aa8.47□□□□□ -1.05
CKS1BP6-201ENST00000424932 NACADO15069 1562 aa8.44□□□□□ -1.06
CKS1BP6-201ENST00000424932 SCRIBQ14160 1630 aa8.38□□□□□ -1.07
CKS1BP6-201ENST00000424932 SUPT5HO00267 1087 aaKnown RBP8.37□□□□□ -1.07
CKS1BP6-201ENST00000424932 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
CKS1BP6-201ENST00000424932 RB1CC1Q8TDY2 1594 aa8.3□□□□□ -1.08
CKS1BP6-201ENST00000424932 UNC13AQ9UPW8 1703 aa8.24□□□□□ -1.09
CKS1BP6-201ENST00000424932 RSF1Q96T23 1441 aaPredicted RBP8.23□□□□□ -1.09
CKS1BP6-201ENST00000424932 CHIC1Q5VXU3 224 aa8.21□□□□□ -1.1
CKS1BP6-201ENST00000424932 BAZ1AQ9NRL2 1556 aaPredicted RBP8.17□□□□□ -1.1
CKS1BP6-201ENST00000424932 MROH2BQ7Z745 1585 aa8.14□□□□□ -1.11
CKS1BP6-201ENST00000424932 CECR2Q9BXF3 1484 aa8.12□□□□□ -1.11
CKS1BP6-201ENST00000424932 WIZO95785 1651 aa8.11□□□□□ -1.11
CKS1BP6-201ENST00000424932 EIF4G1Q04637 1599 aaKnown RBP8.11□□□□□ -1.11
CKS1BP6-201ENST00000424932 SMARCA4P51532 1647 aa8.11□□□□□ -1.11
CKS1BP6-201ENST00000424932 TOP2AP11388 1531 aaKnown RBP8.06□□□□□ -1.12
CKS1BP6-201ENST00000424932 BICRAQ9NZM4 1560 aa8.05□□□□□ -1.12
CKS1BP6-201ENST00000424932 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
CKS1BP6-201ENST00000424932 SMARCA2P51531 1590 aa7.99□□□□□ -1.13
CKS1BP6-201ENST00000424932 CCDC88BA6NC98 1476 aa7.91□□□□□ -1.14
CKS1BP6-201ENST00000424932 TRIM41Q8WV44 630 aa7.89□□□□□ -1.15
CKS1BP6-201ENST00000424932 LOC105371045A0A1W2PR82 267 aa7.84□□□□□ -1.15
CKS1BP6-201ENST00000424932 ABCC8Q09428 1581 aa7.84□□□□□ -1.15
CKS1BP6-201ENST00000424932 ATAD2BQ9ULI0 1458 aa7.83□□□□□ -1.16
CKS1BP6-201ENST00000424932 HMGXB3Q12766 1538 aa7.83□□□□□ -1.16
CKS1BP6-201ENST00000424932 EEA1Q15075 1411 aa7.81□□□□□ -1.16
CKS1BP6-201ENST00000424932 HRCP23327 699 aa7.81□□□□□ -1.16
CKS1BP6-201ENST00000424932 BAZ1BQ9UIG0 1483 aaKnown RBP7.81□□□□□ -1.16
CKS1BP6-201ENST00000424932 PRDM2Q13029 1718 aa7.8□□□□□ -1.16
CKS1BP6-201ENST00000424932 BIVM-ERCC5R4GMW8 1640 aa7.77□□□□□ -1.17
CKS1BP6-201ENST00000424932 SYNJ1O43426 1573 aa7.76□□□□□ -1.17
CKS1BP6-201ENST00000424932 TRIM26Q12899 539 aaPredicted RBP7.76□□□□□ -1.17
CKS1BP6-201ENST00000424932 PABPN1Q86U42 306 aaKnown RBP eCLIP7.76□□□□□ -1.17
CKS1BP6-201ENST00000424932 PCGF6Q9BYE7 350 aa7.76□□□□□ -1.17
CKS1BP6-201ENST00000424932 KIF21BO75037 1637 aa7.75□□□□□ -1.17
CKS1BP6-201ENST00000424932 WRNQ14191 1432 aaPredicted RBP eCLIP7.75□□□□□ -1.17
CKS1BP6-201ENST00000424932 NCAPD3P42695 1498 aa7.75□□□□□ -1.17
CKS1BP6-201ENST00000424932 TOP2BQ02880 1626 aa7.74□□□□□ -1.17
CKS1BP6-201ENST00000424932 GOLGA3Q08378 1498 aa7.69□□□□□ -1.18
CKS1BP6-201ENST00000424932 FAM9AQ8IZU1 332 aaPredicted RBP7.69□□□□□ -1.18
CKS1BP6-201ENST00000424932 TNIKQ9UKE5 1360 aa7.69□□□□□ -1.18
CKS1BP6-201ENST00000424932 SOGA1O94964 1423 aa7.69□□□□□ -1.18
CKS1BP6-201ENST00000424932 CEP162Q5TB80 1403 aa7.67□□□□□ -1.18
CKS1BP6-201ENST00000424932 CEP164Q9UPV0 1460 aa7.67□□□□□ -1.18
CKS1BP6-201ENST00000424932 RUSC2Q8N2Y8 1516 aa7.65□□□□□ -1.18
CKS1BP6-201ENST00000424932 ERICH3Q5RHP9 1530 aa7.64□□□□□ -1.19
CKS1BP6-201ENST00000424932 CFTRP13569 1480 aa7.64□□□□□ -1.19
CKS1BP6-201ENST00000424932 CSRNP3Q8WYN3 585 aa7.62□□□□□ -1.19
CKS1BP6-201ENST00000424932 ZEB1P37275 1124 aaPredicted RBP7.61□□□□□ -1.19
CKS1BP6-201ENST00000424932 CUX1P39880 1505 aa7.61□□□□□ -1.19
CKS1BP6-201ENST00000424932 CC2D2AQ9P2K1 1620 aa7.58□□□□□ -1.2
CKS1BP6-201ENST00000424932 PRXQ9BXM0 1461 aa7.56□□□□□ -1.2
CKS1BP6-201ENST00000424932 RAPGEF2Q9Y4G8 1499 aa7.55□□□□□ -1.2
CKS1BP6-201ENST00000424932 CLIP1P30622 1438 aa7.54□□□□□ -1.2
CKS1BP6-201ENST00000424932 VPS8Q8N3P4 1428 aa7.54□□□□□ -1.2
CKS1BP6-201ENST00000424932 KIF27Q86VH2 1401 aa7.52□□□□□ -1.2
CKS1BP6-201ENST00000424932 CADPSQ9ULU8 1353 aa7.51□□□□□ -1.21
CKS1BP6-201ENST00000424932 PPARGC1BQ86YN6 1023 aaKnown RBP7.51□□□□□ -1.21
CKS1BP6-201ENST00000424932 EHMT2Q96KQ7 1210 aa7.51□□□□□ -1.21
CKS1BP6-201ENST00000424932 DNMBPQ6XZF7 1577 aa7.5□□□□□ -1.21
CKS1BP6-201ENST00000424932 WDR97A6NE52 1622 aa7.5□□□□□ -1.21
CKS1BP6-201ENST00000424932 UBTFP17480 764 aaKnown RBP7.5□□□□□ -1.21
CKS1BP6-201ENST00000424932 LAMC3Q9Y6N6 1575 aa7.49□□□□□ -1.21
CKS1BP6-201ENST00000424932 ARAP1Q96P48 1450 aa7.48□□□□□ -1.21
CKS1BP6-201ENST00000424932 FGD5Q6ZNL6 1462 aa7.47□□□□□ -1.21
CKS1BP6-201ENST00000424932 CUL7Q14999 1698 aa7.47□□□□□ -1.21
CKS1BP6-201ENST00000424932 CTTNBP2Q8WZ74 1663 aa7.45□□□□□ -1.22
CKS1BP6-201ENST00000424932 FANCD2Q9BXW9 1451 aa7.45□□□□□ -1.22
CKS1BP6-201ENST00000424932 MAP3K1Q13233 1512 aa7.44□□□□□ -1.22
CKS1BP6-201ENST00000424932 ABCA10Q8WWZ4 1543 aa7.44□□□□□ -1.22
CKS1BP6-201ENST00000424932 CUX2O14529 1486 aa7.43□□□□□ -1.22
CKS1BP6-201ENST00000424932 CFAP43Q8NDM7 1665 aa7.43□□□□□ -1.22
CKS1BP6-201ENST00000424932 TOPBP1Q92547 1522 aa7.42□□□□□ -1.22
CKS1BP6-201ENST00000424932 ARHGAP35Q9NRY4 1499 aa7.42□□□□□ -1.22
CKS1BP6-201ENST00000424932 ABCA5Q8WWZ7 1642 aa7.41□□□□□ -1.22
CKS1BP6-201ENST00000424932 POLA1P09884 1462 aaPredicted RBP7.4□□□□□ -1.22
CKS1BP6-201ENST00000424932 EFCAB5A4FU69 1503 aa7.4□□□□□ -1.22
CKS1BP6-201ENST00000424932 KIF21AQ7Z4S6 1674 aa7.39□□□□□ -1.23
CKS1BP6-201ENST00000424932 TIAM1Q13009 1591 aa7.39□□□□□ -1.23
CKS1BP6-201ENST00000424932 IGF1RP08069 1367 aa7.39□□□□□ -1.23
CKS1BP6-201ENST00000424932 RRBP1Q9P2E9 1410 aaKnown RBP7.37□□□□□ -1.23
CKS1BP6-201ENST00000424932 URB2Q14146 1524 aaKnown RBP7.37□□□□□ -1.23
CKS1BP6-201ENST00000424932 CCER1Q8TC90 406 aaPredicted RBP7.36□□□□□ -1.23
CKS1BP6-201ENST00000424932 NESP48681 1621 aa7.36□□□□□ -1.23
CKS1BP6-201ENST00000424932 CARMIL1Q5VZK9 1371 aa7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 TARBP1Q13395 1621 aaKnown RBP7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 PCF11O94913 1555 aaKnown RBP7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 AQRO60306 1485 aaKnown RBP eCLIP7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 PBRM1Q86U86 1689 aa7.35□□□□□ -1.23
CKS1BP6-201ENST00000424932 SAMD9Q5K651 1589 aa7.34□□□□□ -1.23
CKS1BP6-201ENST00000424932 APLP2Q06481 763 aa7.34□□□□□ -1.23
CKS1BP6-201ENST00000424932 FHAD1B1AJZ9 1412 aa7.34□□□□□ -1.23
CKS1BP6-201ENST00000424932 PDS5BQ9NTI5 1447 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms