RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 RUSC2Q8N2Y8 1516 aa11.1□□□□□ -0.63
LSM8-204ENST00000424702 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
LSM8-204ENST00000424702 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
LSM8-204ENST00000424702 CLIP1P30622 1438 aa11.09□□□□□ -0.63
LSM8-204ENST00000424702 EIF4G3O43432 1585 aaKnown RBP11.08□□□□□ -0.64
LSM8-204ENST00000424702 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
LSM8-204ENST00000424702 CEP162Q5TB80 1403 aa11.06□□□□□ -0.64
LSM8-204ENST00000424702 KIF21BO75037 1637 aa11.06□□□□□ -0.64
LSM8-204ENST00000424702 JPH4Q96JJ6 628 aa11.05□□□□□ -0.64
LSM8-204ENST00000424702 GRIN2AQ12879 1464 aa11.04□□□□□ -0.64
LSM8-204ENST00000424702 TARBP1Q13395 1621 aaKnown RBP11.04□□□□□ -0.64
LSM8-204ENST00000424702 ABCA5Q8WWZ7 1642 aa11.03□□□□□ -0.64
LSM8-204ENST00000424702 PRXQ9BXM0 1461 aa11.02□□□□□ -0.64
LSM8-204ENST00000424702 ADAMTS12P58397 1594 aa11.02□□□□□ -0.65
LSM8-204ENST00000424702 KIAA0586Q9BVV6 1533 aa11.01□□□□□ -0.65
LSM8-204ENST00000424702 FMN1Q68DA7 1419 aa11□□□□□ -0.65
LSM8-204ENST00000424702 PBRM1Q86U86 1689 aa11□□□□□ -0.65
LSM8-204ENST00000424702 PTPRGP23470 1445 aa10.97□□□□□ -0.65
LSM8-204ENST00000424702 EFCAB5A4FU69 1503 aa10.96□□□□□ -0.65
LSM8-204ENST00000424702 IQGAP2Q13576 1575 aa10.95□□□□□ -0.66
LSM8-204ENST00000424702 PLEKHD1A6NEE1 506 aa10.95□□□□□ -0.66
LSM8-204ENST00000424702 PRG4Q92954 1404 aaPredicted RBP10.94□□□□□ -0.66
LSM8-204ENST00000424702 MTUS2Q5JR59 1369 aa10.92□□□□□ -0.66
LSM8-204ENST00000424702 MYT1LQ9UL68 1186 aa10.92□□□□□ -0.66
LSM8-204ENST00000424702 NUP160Q12769 1436 aa10.91□□□□□ -0.66
LSM8-204ENST00000424702 ARID3CA6NKF2 412 aa10.89□□□□□ -0.67
LSM8-204ENST00000424702 FHOD3Q2V2M9 1422 aa10.87□□□□□ -0.67
LSM8-204ENST00000424702 VPS8Q8N3P4 1428 aa10.87□□□□□ -0.67
LSM8-204ENST00000424702 CYB5RLQ6IPT4 315 aa10.86□□□□□ -0.67
LSM8-204ENST00000424702 CTTNBP2Q8WZ74 1663 aa10.84□□□□□ -0.67
LSM8-204ENST00000424702 CCER1Q8TC90 406 aaPredicted RBP10.83□□□□□ -0.68
LSM8-204ENST00000424702 UGGT2Q9NYU1 1516 aa10.83□□□□□ -0.68
LSM8-204ENST00000424702 CHD1O14646 1710 aa10.82□□□□□ -0.68
LSM8-204ENST00000424702 ZEB1P37275 1124 aaPredicted RBP10.82□□□□□ -0.68
LSM8-204ENST00000424702 CCDC18Q5T9S5 1454 aa10.82□□□□□ -0.68
LSM8-204ENST00000424702 KCNH8Q96L42 1107 aa10.8□□□□□ -0.68
LSM8-204ENST00000424702 UACAQ9BZF9 1416 aa10.8□□□□□ -0.68
LSM8-204ENST00000424702 TRHP20396 242 aaPredicted RBP10.79□□□□□ -0.68
LSM8-204ENST00000424702 FAM50AQ14320 339 aaKnown RBP10.79□□□□□ -0.68
LSM8-204ENST00000424702 HECW1Q76N89 1606 aa10.78□□□□□ -0.68
LSM8-204ENST00000424702 CEP170Q5SW79 1584 aa10.78□□□□□ -0.68
LSM8-204ENST00000424702 CASKIN1Q8WXD9 1431 aa10.78□□□□□ -0.68
LSM8-204ENST00000424702 FYCO1Q9BQS8 1478 aa10.78□□□□□ -0.68
LSM8-204ENST00000424702 HRCP23327 699 aa10.78□□□□□ -0.68
LSM8-204ENST00000424702 ARHGAP35Q9NRY4 1499 aa10.77□□□□□ -0.69
LSM8-204ENST00000424702 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.69
LSM8-204ENST00000424702 ITGAEP38570 1179 aa10.77□□□□□ -0.69
LSM8-204ENST00000424702 ZNF777Q9ULD5 760 aaPredicted RBP10.76□□□□□ -0.69
LSM8-204ENST00000424702 KIAA0556O60303 1618 aa10.75□□□□□ -0.69
LSM8-204ENST00000424702 CFDP1Q9UEE9 299 aaPredicted RBP10.73□□□□□ -0.69
LSM8-204ENST00000424702 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
LSM8-204ENST00000424702 EFCAB2Q5VUJ9 269 aa10.73□□□□□ -0.69
LSM8-204ENST00000424702 TSPY4P0CV99 314 aa10.72□□□□□ -0.69
LSM8-204ENST00000424702 TSPY10P0CW01 314 aa10.72□□□□□ -0.69
LSM8-204ENST00000424702 CLASP1Q7Z460 1538 aa10.71□□□□□ -0.7
LSM8-204ENST00000424702 PLB1Q6P1J6 1458 aa10.7□□□□□ -0.7
LSM8-204ENST00000424702 ARAP1Q96P48 1450 aa10.7□□□□□ -0.7
LSM8-204ENST00000424702 AEBP2Q6ZN18 517 aaPredicted RBP10.69□□□□□ -0.7
LSM8-204ENST00000424702 DNAJC5Q9H3Z4 198 aa10.68□□□□□ -0.7
LSM8-204ENST00000424702 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
LSM8-204ENST00000424702 ESF1Q9H501 851 aaKnown RBP10.68□□□□□ -0.7
LSM8-204ENST00000424702 RAPGEF6Q8TEU7 1601 aa10.67□□□□□ -0.7
LSM8-204ENST00000424702 KANK4Q5T7N3 995 aaPredicted RBP10.67□□□□□ -0.7
LSM8-204ENST00000424702 TROQ12816 1431 aaPredicted RBP10.67□□□□□ -0.7
LSM8-204ENST00000424702 EHBP1L1Q8N3D4 1523 aa10.67□□□□□ -0.7
LSM8-204ENST00000424702 ABCC2Q92887 1545 aa10.67□□□□□ -0.7
LSM8-204ENST00000424702 SAMD9Q5K651 1589 aa10.66□□□□□ -0.7
LSM8-204ENST00000424702 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
LSM8-204ENST00000424702 FAM69CQ0P6D2 419 aa10.66□□□□□ -0.7
LSM8-204ENST00000424702 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
LSM8-204ENST00000424702 EPRSP07814 1512 aaKnown RBP10.65□□□□□ -0.71
LSM8-204ENST00000424702 UHRF1BP1LA0JNW5 1464 aa10.64□□□□□ -0.71
LSM8-204ENST00000424702 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
LSM8-204ENST00000424702 PCF11O94913 1555 aaKnown RBP10.63□□□□□ -0.71
LSM8-204ENST00000424702 PLEKHH2Q8IVE3 1493 aa10.62□□□□□ -0.71
LSM8-204ENST00000424702 SHROOM2Q13796 1616 aa10.61□□□□□ -0.71
LSM8-204ENST00000424702 KIF14Q15058 1648 aa10.6□□□□□ -0.71
LSM8-204ENST00000424702 LRRC9Q6ZRR7 1453 aa10.59□□□□□ -0.71
LSM8-204ENST00000424702 TIAM1Q13009 1591 aa10.59□□□□□ -0.71
LSM8-204ENST00000424702 TEX14Q8IWB6 1497 aa10.59□□□□□ -0.71
LSM8-204ENST00000424702 TRIM52Q96A61 297 aa10.58□□□□□ -0.72
LSM8-204ENST00000424702 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
LSM8-204ENST00000424702 ASXL2Q76L83 1435 aa10.57□□□□□ -0.72
LSM8-204ENST00000424702 PHLDB1Q86UU1 1377 aa10.57□□□□□ -0.72
LSM8-204ENST00000424702 NUP153P49790 1475 aaKnown RBP10.57□□□□□ -0.72
LSM8-204ENST00000424702 ABCA8O94911 1581 aa10.57□□□□□ -0.72
LSM8-204ENST00000424702 ARHGAP5Q13017 1502 aa10.56□□□□□ -0.72
LSM8-204ENST00000424702 CDK13Q14004 1512 aaKnown RBP10.56□□□□□ -0.72
LSM8-204ENST00000424702 SUPT6HQ7KZ85 1726 aaKnown RBP10.56□□□□□ -0.72
LSM8-204ENST00000424702 ATP10BO94823 1461 aa10.56□□□□□ -0.72
LSM8-204ENST00000424702 RIMBP3CA6NJZ7 1639 aa10.56□□□□□ -0.72
LSM8-204ENST00000424702 RIMBP3BA6NNM3 1639 aa10.56□□□□□ -0.72
LSM8-204ENST00000424702 RIMBP3Q9UFD9 1639 aa10.56□□□□□ -0.72
LSM8-204ENST00000424702 MYOM3Q5VTT5 1437 aa10.55□□□□□ -0.72
LSM8-204ENST00000424702 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
LSM8-204ENST00000424702 CD109Q6YHK3 1445 aa10.55□□□□□ -0.72
LSM8-204ENST00000424702 SPAG9O60271 1321 aaKnown RBP10.54□□□□□ -0.72
LSM8-204ENST00000424702 MIA2Q96PC5 1412 aa10.54□□□□□ -0.72
LSM8-204ENST00000424702 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
LSM8-204ENST00000424702 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms