RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 ITGAEP38570 1179 aa27.63■■■□□ 2.01
RAF1-203ENST00000423275 CENPBP07199 599 aaPredicted RBP27.63■■■□□ 2.01
RAF1-203ENST00000423275 CUL7Q14999 1698 aa27.62■■■□□ 2.01
RAF1-203ENST00000423275 FHOD3Q2V2M9 1422 aa27.61■■■□□ 2.01
RAF1-203ENST00000423275 LRRC9Q6ZRR7 1453 aa27.61■■■□□ 2.01
RAF1-203ENST00000423275 WDR97A6NE52 1622 aa27.61■■■□□ 2.01
RAF1-203ENST00000423275 PCF11O94913 1555 aaKnown RBP27.6■■■□□ 2.01
RAF1-203ENST00000423275 FHAD1B1AJZ9 1412 aa27.6■■■□□ 2.01
RAF1-203ENST00000423275 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
RAF1-203ENST00000423275 PDS5BQ9NTI5 1447 aa27.57■■■□□ 2
RAF1-203ENST00000423275 CLSPNQ9HAW4 1339 aa27.57■■■□□ 2
RAF1-203ENST00000423275 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
RAF1-203ENST00000423275 PHLDB1Q86UU1 1377 aa27.54■■■□□ 2
RAF1-203ENST00000423275 CTTNBP2Q8WZ74 1663 aa27.53■■■□□ 2
RAF1-203ENST00000423275 MIER1Q8N108 512 aa27.52■■■□□ 2
RAF1-203ENST00000423275 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
RAF1-203ENST00000423275 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
RAF1-203ENST00000423275 CFAP43Q8NDM7 1665 aa27.51■■□□□ 1.99
RAF1-203ENST00000423275 EFCAB5A4FU69 1503 aa27.5■■□□□ 1.99
RAF1-203ENST00000423275 GTF3C3Q9Y5Q9 886 aa27.49■■□□□ 1.99
RAF1-203ENST00000423275 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
RAF1-203ENST00000423275 FYCO1Q9BQS8 1478 aa27.44■■□□□ 1.98
RAF1-203ENST00000423275 YTHDC1Q96MU7 727 aaKnown RBP27.44■■□□□ 1.98
RAF1-203ENST00000423275 CASKIN1Q8WXD9 1431 aa27.44■■□□□ 1.98
RAF1-203ENST00000423275 RAB3GAP2Q9H2M9 1393 aa27.43■■□□□ 1.98
RAF1-203ENST00000423275 AQRO60306 1485 aaKnown RBP eCLIP27.4■■□□□ 1.985e-8■■■■■ 32.4
RAF1-203ENST00000423275 FAM50AQ14320 339 aaKnown RBP27.4■■□□□ 1.98
RAF1-203ENST00000423275 TARBP1Q13395 1621 aaKnown RBP27.37■■□□□ 1.97
RAF1-203ENST00000423275 FMN1Q68DA7 1419 aa27.34■■□□□ 1.97
RAF1-203ENST00000423275 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
RAF1-203ENST00000423275 SETD5Q9C0A6 1442 aa27.32■■□□□ 1.96
RAF1-203ENST00000423275 SAMD9Q5K651 1589 aa27.31■■□□□ 1.96
RAF1-203ENST00000423275 MAPKBP1O60336 1514 aa27.28■■□□□ 1.96
RAF1-203ENST00000423275 LRRIQ1Q96JM4 1722 aa27.23■■□□□ 1.95
RAF1-203ENST00000423275 PELP1Q8IZL8 1130 aaKnown RBP27.22■■□□□ 1.95
RAF1-203ENST00000423275 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
RAF1-203ENST00000423275 PBRM1Q86U86 1689 aa27.19■■□□□ 1.94
RAF1-203ENST00000423275 MTUS2Q5JR59 1369 aa27.18■■□□□ 1.94
RAF1-203ENST00000423275 MRC2Q9UBG0 1479 aa27.17■■□□□ 1.94
RAF1-203ENST00000423275 FGD6Q6ZV73 1430 aa27.16■■□□□ 1.94
RAF1-203ENST00000423275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.15■■□□□ 1.943e-7■■■■□ 22
RAF1-203ENST00000423275 SIN3AQ96ST3 1273 aa27.1■■□□□ 1.93
RAF1-203ENST00000423275 ADAMTS12P58397 1594 aa27.1■■□□□ 1.93
RAF1-203ENST00000423275 NCOA2Q15596 1464 aa27.08■■□□□ 1.93
RAF1-203ENST00000423275 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
RAF1-203ENST00000423275 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
RAF1-203ENST00000423275 PTPRKQ15262 1439 aa27.06■■□□□ 1.92
RAF1-203ENST00000423275 IQGAP2Q13576 1575 aa27.04■■□□□ 1.92
RAF1-203ENST00000423275 MAGI3Q5TCQ9 1506 aa27.03■■□□□ 1.92
RAF1-203ENST00000423275 MYOM3Q5VTT5 1437 aa27.01■■□□□ 1.92
RAF1-203ENST00000423275 EHBP1L1Q8N3D4 1523 aa27■■□□□ 1.91
RAF1-203ENST00000423275 SUPT6HQ7KZ85 1726 aaKnown RBP26.99■■□□□ 1.91
RAF1-203ENST00000423275 IFT140Q96RY7 1462 aa26.98■■□□□ 1.91
RAF1-203ENST00000423275 WDR62O43379 1518 aa26.96■■□□□ 1.91
RAF1-203ENST00000423275 ERCC6Q03468 1493 aa26.96■■□□□ 1.91
RAF1-203ENST00000423275 UGGT2Q9NYU1 1516 aa26.95■■□□□ 1.9
RAF1-203ENST00000423275 CCDC18Q5T9S5 1454 aa26.94■■□□□ 1.9
RAF1-203ENST00000423275 ARHGEF11O15085 1522 aa26.93■■□□□ 1.9
RAF1-203ENST00000423275 HFM1A2PYH4 1435 aa26.92■■□□□ 1.9
RAF1-203ENST00000423275 HECW1Q76N89 1606 aa26.92■■□□□ 1.9
RAF1-203ENST00000423275 ARID3CA6NKF2 412 aa26.91■■□□□ 1.9
RAF1-203ENST00000423275 EPRSP07814 1512 aaKnown RBP26.9■■□□□ 1.9
RAF1-203ENST00000423275 PTPN23Q9H3S7 1636 aa26.9■■□□□ 1.9
RAF1-203ENST00000423275 CDK13Q14004 1512 aaKnown RBP26.89■■□□□ 1.9
RAF1-203ENST00000423275 NAIPQ13075 1403 aa26.88■■□□□ 1.89
RAF1-203ENST00000423275 UACAQ9BZF9 1416 aa26.83■■□□□ 1.89
RAF1-203ENST00000423275 TIMELESSQ9UNS1 1208 aa26.83■■□□□ 1.88
RAF1-203ENST00000423275 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
RAF1-203ENST00000423275 KIAA0586Q9BVV6 1533 aa26.81■■□□□ 1.88
RAF1-203ENST00000423275 DISP1Q96F81 1524 aa26.8■■□□□ 1.88
RAF1-203ENST00000423275 PPP1R15AO75807 674 aaPredicted RBP26.8■■□□□ 1.88
RAF1-203ENST00000423275 CHIC2Q9UKJ5 165 aa26.79■■□□□ 1.88
RAF1-203ENST00000423275 TCOF1Q13428 1488 aaKnown RBP26.79■■□□□ 1.88
RAF1-203ENST00000423275 GRIN2AQ12879 1464 aa26.78■■□□□ 1.88
RAF1-203ENST00000423275 RRP7BPQ9NSQ0 103 aa26.78■■□□□ 1.88
RAF1-203ENST00000423275 KIAA0556O60303 1618 aa26.76■■□□□ 1.88
RAF1-203ENST00000423275 KCNH8Q96L42 1107 aa26.72■■□□□ 1.87
RAF1-203ENST00000423275 HIRIP3Q9BW71 556 aaPredicted RBP26.72■■□□□ 1.87
RAF1-203ENST00000423275 DDX10Q13206 875 aaKnown RBP26.7■■□□□ 1.86
RAF1-203ENST00000423275 NUP153P49790 1475 aaKnown RBP26.69■■□□□ 1.86
RAF1-203ENST00000423275 TONSLQ96HA7 1378 aa26.69■■□□□ 1.86
RAF1-203ENST00000423275 MIA2Q96PC5 1412 aa26.68■■□□□ 1.86
RAF1-203ENST00000423275 KDM6BO15054 1643 aa26.66■■□□□ 1.86
RAF1-203ENST00000423275 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.86
RAF1-203ENST00000423275 GCC2Q8IWJ2 1684 aa26.64■■□□□ 1.85
RAF1-203ENST00000423275 RAPGEF6Q8TEU7 1601 aa26.63■■□□□ 1.85
RAF1-203ENST00000423275 MAGI1Q96QZ7 1491 aaPredicted RBP26.63■■□□□ 1.85
RAF1-203ENST00000423275 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
RAF1-203ENST00000423275 DENND4BO75064 1496 aaPredicted RBP26.62■■□□□ 1.85
RAF1-203ENST00000423275 FBLN2P98095 1184 aa26.62■■□□□ 1.85
RAF1-203ENST00000423275 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
RAF1-203ENST00000423275 AKNAQ7Z591 1439 aa26.59■■□□□ 1.85
RAF1-203ENST00000423275 TRIM52Q96A61 297 aa26.59■■□□□ 1.85
RAF1-203ENST00000423275 ZNF644Q9H582 1327 aaPredicted RBP26.58■■□□□ 1.85
RAF1-203ENST00000423275 KDM5BQ9UGL1 1544 aa26.57■■□□□ 1.84
RAF1-203ENST00000423275 PLB1Q6P1J6 1458 aa26.54■■□□□ 1.84
RAF1-203ENST00000423275 SUPT16HQ9Y5B9 1047 aaKnown RBP26.53■■□□□ 1.84
RAF1-203ENST00000423275 DAPK1P53355 1430 aa26.53■■□□□ 1.84
RAF1-203ENST00000423275 PRG4Q92954 1404 aaPredicted RBP26.53■■□□□ 1.84
RAF1-203ENST00000423275 ABCC5O15440 1437 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms