RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 CFAP43Q8NDM7 1665 aa7.89□□□□□ -1.15
ITGB1-205ENST00000423113 ADCY10Q96PN6 1610 aa7.88□□□□□ -1.15
ITGB1-205ENST00000423113 RIMBP3CA6NJZ7 1639 aa7.88□□□□□ -1.15
ITGB1-205ENST00000423113 RIMBP3BA6NNM3 1639 aa7.88□□□□□ -1.15
ITGB1-205ENST00000423113 RIMBP3Q9UFD9 1639 aa7.88□□□□□ -1.15
ITGB1-205ENST00000423113 AQRO60306 1485 aaKnown RBP eCLIP7.88□□□□□ -1.154e-7■■■■□ 26.7
ITGB1-205ENST00000423113 ABCA8O94911 1581 aa7.86□□□□□ -1.15
ITGB1-205ENST00000423113 UHRF1BP1LA0JNW5 1464 aa7.86□□□□□ -1.15
ITGB1-205ENST00000423113 DISP1Q96F81 1524 aa7.86□□□□□ -1.15
ITGB1-205ENST00000423113 PPARGC1BQ86YN6 1023 aaKnown RBP7.85□□□□□ -1.15
ITGB1-205ENST00000423113 KDM5BQ9UGL1 1544 aa7.84□□□□□ -1.15
ITGB1-205ENST00000423113 GOLGA3Q08378 1498 aa7.83□□□□□ -1.16
ITGB1-205ENST00000423113 MAP3K1Q13233 1512 aa7.83□□□□□ -1.16
ITGB1-205ENST00000423113 CHIC1Q5VXU3 224 aa7.82□□□□□ -1.16
ITGB1-205ENST00000423113 KIF13AQ9H1H9 1805 aa7.81□□□□□ -1.16
ITGB1-205ENST00000423113 MAPKBP1O60336 1514 aa7.8□□□□□ -1.16
ITGB1-205ENST00000423113 PCGF6Q9BYE7 350 aa7.79□□□□□ -1.16
ITGB1-205ENST00000423113 RAPGEF6Q8TEU7 1601 aa7.79□□□□□ -1.16
ITGB1-205ENST00000423113 GLI2P10070 1586 aa7.79□□□□□ -1.16
ITGB1-205ENST00000423113 ARHGEF11O15085 1522 aa7.78□□□□□ -1.16
ITGB1-205ENST00000423113 CARMIL1Q5VZK9 1371 aa7.78□□□□□ -1.16
ITGB1-205ENST00000423113 TDRD9Q8NDG6 1382 aaKnown RBP7.78□□□□□ -1.16
ITGB1-205ENST00000423113 ERCC6L2Q5T890 1561 aa7.78□□□□□ -1.16
ITGB1-205ENST00000423113 ZCCHC11Q5TAX3 1644 aaKnown RBP7.77□□□□□ -1.17
ITGB1-205ENST00000423113 MAP3K4Q9Y6R4 1608 aa7.77□□□□□ -1.17
ITGB1-205ENST00000423113 PPRC1Q5VV67 1664 aaKnown RBP7.77□□□□□ -1.17
ITGB1-205ENST00000423113 SLC24A1O60721 1099 aa7.76□□□□□ -1.17
ITGB1-205ENST00000423113 ABCC2Q92887 1545 aa7.76□□□□□ -1.17
ITGB1-205ENST00000423113 HECW1Q76N89 1606 aa7.76□□□□□ -1.17
ITGB1-205ENST00000423113 TNIKQ9UKE5 1360 aa7.75□□□□□ -1.17
ITGB1-205ENST00000423113 ARAP3Q8WWN8 1544 aa7.75□□□□□ -1.17
ITGB1-205ENST00000423113 ARAP1Q96P48 1450 aa7.73□□□□□ -1.17
ITGB1-205ENST00000423113 ARHGAP35Q9NRY4 1499 aa7.73□□□□□ -1.17
ITGB1-205ENST00000423113 ABCA9Q8IUA7 1624 aa7.73□□□□□ -1.17
ITGB1-205ENST00000423113 FYCO1Q9BQS8 1478 aa7.73□□□□□ -1.17
ITGB1-205ENST00000423113 PCF11O94913 1555 aaKnown RBP7.72□□□□□ -1.17
ITGB1-205ENST00000423113 BCORL1Q5H9F3 1711 aa7.71□□□□□ -1.18
ITGB1-205ENST00000423113 CROCC2H7BZ55 1655 aa7.69□□□□□ -1.18
ITGB1-205ENST00000423113 CFAP74Q9C0B2 1584 aa7.69□□□□□ -1.18
ITGB1-205ENST00000423113 DIP2BQ9P265 1576 aa7.69□□□□□ -1.18
ITGB1-205ENST00000423113 CDC42BPAQ5VT25 1732 aa7.69□□□□□ -1.18
ITGB1-205ENST00000423113 SCAF1Q9H7N4 1312 aaKnown RBP7.69□□□□□ -1.18
ITGB1-205ENST00000423113 PREX2Q70Z35 1606 aa7.68□□□□□ -1.18
ITGB1-205ENST00000423113 ITSN2Q9NZM3 1697 aa7.68□□□□□ -1.18
ITGB1-205ENST00000423113 TTBK1Q5TCY1 1321 aaPredicted RBP7.68□□□□□ -1.18
ITGB1-205ENST00000423113 AEBP2Q6ZN18 517 aaPredicted RBP7.67□□□□□ -1.18
ITGB1-205ENST00000423113 CCDC18Q5T9S5 1454 aa7.67□□□□□ -1.18
ITGB1-205ENST00000423113 MYO5CQ9NQX4 1742 aa7.67□□□□□ -1.18
ITGB1-205ENST00000423113 CSRNP3Q8WYN3 585 aa7.67□□□□□ -1.18
ITGB1-205ENST00000423113 CDC42BPBQ9Y5S2 1711 aa7.66□□□□□ -1.18
ITGB1-205ENST00000423113 CASKIN1Q8WXD9 1431 aa7.66□□□□□ -1.18
ITGB1-205ENST00000423113 TIAM1Q13009 1591 aa7.66□□□□□ -1.18
ITGB1-205ENST00000423113 TRIM41Q8WV44 630 aa7.66□□□□□ -1.18
ITGB1-205ENST00000423113 NUP153P49790 1475 aaKnown RBP7.65□□□□□ -1.18
ITGB1-205ENST00000423113 EHMT2Q96KQ7 1210 aa7.64□□□□□ -1.19
ITGB1-205ENST00000423113 CARMIL2Q6F5E8 1435 aa7.63□□□□□ -1.19
ITGB1-205ENST00000423113 PRG4Q92954 1404 aaPredicted RBP7.63□□□□□ -1.19
ITGB1-205ENST00000423113 EHBP1L1Q8N3D4 1523 aa7.62□□□□□ -1.19
ITGB1-205ENST00000423113 FMN1Q68DA7 1419 aa7.62□□□□□ -1.19
ITGB1-205ENST00000423113 RICTORQ6R327 1708 aa7.62□□□□□ -1.19
ITGB1-205ENST00000423113 SUPT6HQ7KZ85 1726 aaKnown RBP7.62□□□□□ -1.19
ITGB1-205ENST00000423113 MAGI3Q5TCQ9 1506 aa7.61□□□□□ -1.19
ITGB1-205ENST00000423113 MAST1Q9Y2H9 1570 aa7.61□□□□□ -1.19
ITGB1-205ENST00000423113 REREQ9P2R6 1566 aa7.61□□□□□ -1.19
ITGB1-205ENST00000423113 CEP162Q5TB80 1403 aa7.6□□□□□ -1.19
ITGB1-205ENST00000423113 ABCC10Q5T3U5 1492 aa7.6□□□□□ -1.19
ITGB1-205ENST00000423113 KIF14Q15058 1648 aa7.59□□□□□ -1.19
ITGB1-205ENST00000423113 EPRSP07814 1512 aaKnown RBP7.59□□□□□ -1.19
ITGB1-205ENST00000423113 ZMYM4Q5VZL5 1548 aa7.59□□□□□ -1.19
ITGB1-205ENST00000423113 UACAQ9BZF9 1416 aa7.59□□□□□ -1.19
ITGB1-205ENST00000423113 ADGBQ8N7X0 1667 aa7.59□□□□□ -1.19
ITGB1-205ENST00000423113 VPS8Q8N3P4 1428 aa7.59□□□□□ -1.2
ITGB1-205ENST00000423113 OSCARQ8IYS5 282 aa7.58□□□□□ -1.2
ITGB1-205ENST00000423113 TTC37Q6PGP7 1564 aa7.58□□□□□ -1.2
ITGB1-205ENST00000423113 FRMPD1Q5SYB0 1578 aa7.58□□□□□ -1.2
ITGB1-205ENST00000423113 ARHGEF5Q12774 1597 aa7.58□□□□□ -1.2
ITGB1-205ENST00000423113 CENPBP07199 599 aaPredicted RBP7.57□□□□□ -1.2
ITGB1-205ENST00000423113 KDM5CP41229 1560 aa7.57□□□□□ -1.2
ITGB1-205ENST00000423113 DNAJC5Q9H3Z4 198 aa7.56□□□□□ -1.2
ITGB1-205ENST00000423113 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.56□□□□□ -1.23e-9■■□□□ 13.8
ITGB1-205ENST00000423113 ATP10BO94823 1461 aa7.56□□□□□ -1.2
ITGB1-205ENST00000423113 WDR7Q9Y4E6 1490 aa7.55□□□□□ -1.2
ITGB1-205ENST00000423113 INO80Q9ULG1 1556 aaPredicted RBP7.55□□□□□ -1.2
ITGB1-205ENST00000423113 PLXNC1O60486 1568 aa7.55□□□□□ -1.2
ITGB1-205ENST00000423113 TCOF1Q13428 1488 aaKnown RBP7.55□□□□□ -1.2
ITGB1-205ENST00000423113 PLB1Q6P1J6 1458 aa7.55□□□□□ -1.2
ITGB1-205ENST00000423113 CLIP1P30622 1438 aa7.55□□□□□ -1.2
ITGB1-205ENST00000423113 BCL11AQ9H165 835 aa7.54□□□□□ -1.2
ITGB1-205ENST00000423113 GCC2Q8IWJ2 1684 aa7.53□□□□□ -1.2
ITGB1-205ENST00000423113 DEPDC5O75140 1603 aa7.53□□□□□ -1.2
ITGB1-205ENST00000423113 EIF2AK4Q9P2K8 1649 aaKnown RBP7.53□□□□□ -1.2
ITGB1-205ENST00000423113 FAM135AQ9P2D6 1515 aa7.53□□□□□ -1.2
ITGB1-205ENST00000423113 CHMP7Q8WUX9 453 aaPredicted RBP7.53□□□□□ -1.2
ITGB1-205ENST00000423113 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
ITGB1-205ENST00000423113 ABCC1P33527 1531 aa7.52□□□□□ -1.21
ITGB1-205ENST00000423113 JPH4Q96JJ6 628 aa7.52□□□□□ -1.21
ITGB1-205ENST00000423113 DNMT1P26358 1616 aaKnown RBP7.52□□□□□ -1.21
ITGB1-205ENST00000423113 SAMD9LQ8IVG5 1584 aa7.51□□□□□ -1.21
ITGB1-205ENST00000423113 LRRC9Q6ZRR7 1453 aa7.5□□□□□ -1.21
ITGB1-205ENST00000423113 FHOD3Q2V2M9 1422 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms