RNA–Protein interactions for RNA: ENST00000422959.6

PHTF2-206, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PHTF2, Length 3,525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-206ENST00000422959 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
PHTF2-206ENST00000422959 CFTRP13569 1480 aa20.74■□□□□ 0.91
PHTF2-206ENST00000422959 NESP48681 1621 aa20.71■□□□□ 0.91
PHTF2-206ENST00000422959 FGD5Q6ZNL6 1462 aa20.71■□□□□ 0.91
PHTF2-206ENST00000422959 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
PHTF2-206ENST00000422959 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
PHTF2-206ENST00000422959 RRP7BPQ9NSQ0 103 aa20.67■□□□□ 0.9
PHTF2-206ENST00000422959 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
PHTF2-206ENST00000422959 ERICH3Q5RHP9 1530 aa20.58■□□□□ 0.88
PHTF2-206ENST00000422959 MTUS2Q5JR59 1369 aa20.58■□□□□ 0.88
PHTF2-206ENST00000422959 FBLN2P98095 1184 aa20.57■□□□□ 0.88
PHTF2-206ENST00000422959 FOXD1Q16676 465 aa20.56■□□□□ 0.88
PHTF2-206ENST00000422959 POLR3GLQ9BT43 218 aa20.56■□□□□ 0.88
PHTF2-206ENST00000422959 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
PHTF2-206ENST00000422959 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
PHTF2-206ENST00000422959 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
PHTF2-206ENST00000422959 SETD5Q9C0A6 1442 aa20.54■□□□□ 0.88
PHTF2-206ENST00000422959 RRBP1Q9P2E9 1410 aaKnown RBP20.53■□□□□ 0.88
PHTF2-206ENST00000422959 SUPT16HQ9Y5B9 1047 aaKnown RBP20.52■□□□□ 0.87
PHTF2-206ENST00000422959 CLSPNQ9HAW4 1339 aa20.51■□□□□ 0.87
PHTF2-206ENST00000422959 FKBP8Q14318 412 aa20.48■□□□□ 0.87
PHTF2-206ENST00000422959 CC2D2AQ9P2K1 1620 aa20.47■□□□□ 0.87
PHTF2-206ENST00000422959 TONSLQ96HA7 1378 aa20.46■□□□□ 0.87
PHTF2-206ENST00000422959 LRRC9Q6ZRR7 1453 aa20.45■□□□□ 0.86
PHTF2-206ENST00000422959 ZNF326Q5BKZ1 582 aaKnown RBP20.45■□□□□ 0.86
PHTF2-206ENST00000422959 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
PHTF2-206ENST00000422959 ZNF777Q9ULD5 760 aaPredicted RBP20.44■□□□□ 0.86
PHTF2-206ENST00000422959 ANP32CO43423 234 aa20.43■□□□□ 0.86
PHTF2-206ENST00000422959 FHAD1B1AJZ9 1412 aa20.41■□□□□ 0.86
PHTF2-206ENST00000422959 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.86
PHTF2-206ENST00000422959 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
PHTF2-206ENST00000422959 TIAM1Q13009 1591 aa20.35■□□□□ 0.85
PHTF2-206ENST00000422959 WDR97A6NE52 1622 aa20.33■□□□□ 0.85
PHTF2-206ENST00000422959 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
PHTF2-206ENST00000422959 NEFLP07196 543 aa20.32■□□□□ 0.84
PHTF2-206ENST00000422959 PCF11O94913 1555 aaKnown RBP20.31■□□□□ 0.84
PHTF2-206ENST00000422959 MAPKBP1O60336 1514 aa20.29■□□□□ 0.84
PHTF2-206ENST00000422959 HNRNPUQ00839 825 aaKnown RBP eCLIP20.29■□□□□ 0.84
PHTF2-206ENST00000422959 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.843e-7■■■■■ 36.6
PHTF2-206ENST00000422959 ZNF644Q9H582 1327 aaPredicted RBP20.27■□□□□ 0.83
PHTF2-206ENST00000422959 FAM9BQ8IZU0 186 aa20.24■□□□□ 0.83
PHTF2-206ENST00000422959 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
PHTF2-206ENST00000422959 FGD6Q6ZV73 1430 aa20.21■□□□□ 0.83
PHTF2-206ENST00000422959 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
PHTF2-206ENST00000422959 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
PHTF2-206ENST00000422959 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
PHTF2-206ENST00000422959 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
PHTF2-206ENST00000422959 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
PHTF2-206ENST00000422959 CCDC18Q5T9S5 1454 aa20.17■□□□□ 0.82
PHTF2-206ENST00000422959 CASKIN1Q8WXD9 1431 aa20.17■□□□□ 0.82
PHTF2-206ENST00000422959 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
PHTF2-206ENST00000422959 L3MBTL2Q969R5 705 aa20.15■□□□□ 0.82
PHTF2-206ENST00000422959 TSHZ2Q9NRE2 1034 aa20.15■□□□□ 0.82
PHTF2-206ENST00000422959 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
PHTF2-206ENST00000422959 MPHOSPH9Q99550 1183 aa20.13■□□□□ 0.81
PHTF2-206ENST00000422959 NCOA2Q15596 1464 aa20.12■□□□□ 0.81
PHTF2-206ENST00000422959 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
PHTF2-206ENST00000422959 CCDC184Q52MB2 194 aa20.12■□□□□ 0.81
PHTF2-206ENST00000422959 KDM2AQ9Y2K7 1162 aa20.11■□□□□ 0.81
PHTF2-206ENST00000422959 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
PHTF2-206ENST00000422959 EIF4G2P78344 907 aaKnown RBP eCLIP20.08■□□□□ 0.83e-7■■■□□ 17
PHTF2-206ENST00000422959 FYCO1Q9BQS8 1478 aa20.07■□□□□ 0.8
PHTF2-206ENST00000422959 C11orf95C9JLR9 678 aaPredicted RBP20.05■□□□□ 0.8
PHTF2-206ENST00000422959 SALL2Q9Y467 1007 aaPredicted RBP20.04■□□□□ 0.8
PHTF2-206ENST00000422959 MYOM3Q5VTT5 1437 aa20.04■□□□□ 0.8
PHTF2-206ENST00000422959 CFDP1Q9UEE9 299 aaPredicted RBP20.04■□□□□ 0.8
PHTF2-206ENST00000422959 MRS2Q9HD23 443 aa20.03■□□□□ 0.8
PHTF2-206ENST00000422959 CDK13Q14004 1512 aaKnown RBP20.03■□□□□ 0.8
PHTF2-206ENST00000422959 NAIPQ13075 1403 aa20.03■□□□□ 0.8
PHTF2-206ENST00000422959 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.8
PHTF2-206ENST00000422959 NBPF8Q3BBV2 869 aa19.99■□□□□ 0.79
PHTF2-206ENST00000422959 TIMELESSQ9UNS1 1208 aa19.98■□□□□ 0.79
PHTF2-206ENST00000422959 UACAQ9BZF9 1416 aa19.98■□□□□ 0.79
PHTF2-206ENST00000422959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.97■□□□□ 0.793e-8■■■■□ 20.1
PHTF2-206ENST00000422959 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
PHTF2-206ENST00000422959 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
PHTF2-206ENST00000422959 ZNF608Q9ULD9 1512 aaPredicted RBP19.95■□□□□ 0.78
PHTF2-206ENST00000422959 HFM1A2PYH4 1435 aa19.95■□□□□ 0.78
PHTF2-206ENST00000422959 MAP3K1Q13233 1512 aa19.94■□□□□ 0.78
PHTF2-206ENST00000422959 RGL3Q3MIN7 710 aa19.94■□□□□ 0.78
PHTF2-206ENST00000422959 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
PHTF2-206ENST00000422959 PKD2Q13563 968 aa19.91■□□□□ 0.78
PHTF2-206ENST00000422959 EFCAB5A4FU69 1503 aa19.9■□□□□ 0.78
PHTF2-206ENST00000422959 MAGI3Q5TCQ9 1506 aa19.89■□□□□ 0.77
PHTF2-206ENST00000422959 B4GALNT3Q6L9W6 998 aa19.87■□□□□ 0.77
PHTF2-206ENST00000422959 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.777e-7■■■■□ 22.3
PHTF2-206ENST00000422959 PRG4Q92954 1404 aaPredicted RBP19.85■□□□□ 0.77
PHTF2-206ENST00000422959 RBM19Q9Y4C8 960 aaKnown RBP19.85■□□□□ 0.77
PHTF2-206ENST00000422959 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
PHTF2-206ENST00000422959 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
PHTF2-206ENST00000422959 CFAP43Q8NDM7 1665 aa19.84■□□□□ 0.77
PHTF2-206ENST00000422959 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
PHTF2-206ENST00000422959 EPRSP07814 1512 aaKnown RBP19.83■□□□□ 0.77
PHTF2-206ENST00000422959 PTPN23Q9H3S7 1636 aa19.83■□□□□ 0.77
PHTF2-206ENST00000422959 PRDM2Q13029 1718 aa19.83■□□□□ 0.76
PHTF2-206ENST00000422959 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
PHTF2-206ENST00000422959 MYT1LQ9UL68 1186 aa19.81■□□□□ 0.76
PHTF2-206ENST00000422959 CUL7Q14999 1698 aa19.8■□□□□ 0.76
PHTF2-206ENST00000422959 PRKRIP1Q9H875 184 aaPredicted RBP19.8■□□□□ 0.76
PHTF2-206ENST00000422959 THOC2Q8NI27 1593 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms