RNA–Protein interactions for RNA: ENST00000422959.6

PHTF2-206, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PHTF2, Length 3,525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-206ENST00000422959 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.48□□□□□ -0.091e-16■■■■■ 50.9
PHTF2-206ENST00000422959 PCBP2Q15366 365 aaKnown RBP eCLIP14.02□□□□□ -0.161e-11■■■■□ 26.6
PHTF2-206ENST00000422959 U2AF2P26368 475 aaKnown RBP eCLIP16.78■□□□□ 0.282e-11■■■■■ 42.1
PHTF2-206ENST00000422959 ZNF622Q969S3 477 aaKnown RBP eCLIP16.16■□□□□ 0.184e-10■□□□□ 8.7
PHTF2-206ENST00000422959 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.01□□□□□ -0.173e-9■■■■■ 46
PHTF2-206ENST00000422959 QKIQ96PU8 341 aaKnown RBP eCLIP14.75□□□□□ -0.054e-9■■■■■ 62.2
PHTF2-206ENST00000422959 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.25■□□□□ 0.035e-9■■■■■ 39.9
PHTF2-206ENST00000422959 RBM22Q9NW64 420 aaKnown RBP eCLIP14.7□□□□□ -0.068e-9■■■■■ 36.9
PHTF2-206ENST00000422959 SF3B4Q15427 424 aaKnown RBP eCLIP13.63□□□□□ -0.232e-8■■■□□ 15.1
PHTF2-206ENST00000422959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.97■□□□□ 0.793e-8■■■■□ 20.1
PHTF2-206ENST00000422959 HNRNPKP61978 463 aaKnown RBP eCLIP12.98□□□□□ -0.337e-8■■□□□ 14.4
PHTF2-206ENST00000422959 ILF3Q12906 894 aaKnown RBP eCLIP13.39□□□□□ -0.271e-7■■■□□ 15.2
PHTF2-206ENST00000422959 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.4■□□□□ 0.221e-7■■■□□ 17.9
PHTF2-206ENST00000422959 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.61e-7■■■■■ 44.5
PHTF2-206ENST00000422959 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.843e-7■■■■■ 36.6
PHTF2-206ENST00000422959 EIF4G2P78344 907 aaKnown RBP eCLIP20.08■□□□□ 0.83e-7■■■□□ 17
PHTF2-206ENST00000422959 AARSP49588 968 aaKnown RBP eCLIP15.62■□□□□ 0.093e-7■■■■■ 72.1
PHTF2-206ENST00000422959 DDX3XO00571 662 aaKnown RBP eCLIP15.71■□□□□ 0.13e-7■■■■■ 31.8
PHTF2-206ENST00000422959 GPKOWQ92917 476 aaPredicted RBP eCLIP16.54■□□□□ 0.244e-7■□□□□ 10.8
PHTF2-206ENST00000422959 HNRNPLP14866 589 aaKnown RBP eCLIP14.75□□□□□ -0.056e-7■■■■□ 22.6
PHTF2-206ENST00000422959 KHSRPQ92945 711 aaKnown RBP eCLIP14.91□□□□□ -0.027e-7■■■□□ 15
PHTF2-206ENST00000422959 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.62□□□□□ -0.397e-7■■■■□ 21.2
PHTF2-206ENST00000422959 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.61■□□□□ 0.097e-7■□□□□ 8.3
PHTF2-206ENST00000422959 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.777e-7■■■■□ 22.3
PHTF2-206ENST00000422959 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.78■□□□□ 0.288e-7■■□□□ 12
PHTF2-206ENST00000422959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.519e-7■■■■■ 26.8
PHTF2-206ENST00000422959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.14■□□□□ 0.179e-7■■■■■ 46.9
PHTF2-206ENST00000422959 YBX3P16989 372 aaKnown RBP eCLIP14.77□□□□□ -0.041e-6■■■■□ 21.3
PHTF2-206ENST00000422959 PTBP1P26599 531 aaKnown RBP eCLIP12.97□□□□□ -0.332e-6■■■■□ 23.9
PHTF2-206ENST00000422959 UPF1Q92900 1129 aaKnown RBP eCLIP14.43□□□□□ -0.13e-6■■■■□ 24.2
PHTF2-206ENST00000422959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.283e-6■■■■□ 20.6
PHTF2-206ENST00000422959 SAFB2Q14151 953 aaKnown RBP eCLIP19.19■□□□□ 0.667e-6■□□□□ 10.4
PHTF2-206ENST00000422959 SF3B1O75533 1304 aaKnown RBP eCLIP14.51□□□□□ -0.098e-6■■■■■ 60.1
Retrieved 33 of 33 RNA–protein pairs in 64.6 ms