RNA–Protein interactions for RNA: ENST00000422728.2

FAM200B-201, Transcript of family with sequence similarity 200 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM200B, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-201ENST00000422728 CUL7Q14999 1698 aa20.38■□□□□ 0.85
FAM200B-201ENST00000422728 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
FAM200B-201ENST00000422728 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
FAM200B-201ENST00000422728 MAPKBP1O60336 1514 aa20.34■□□□□ 0.85
FAM200B-201ENST00000422728 ABCA10Q8WWZ4 1543 aa20.33■□□□□ 0.85
FAM200B-201ENST00000422728 EFCAB5A4FU69 1503 aa20.32■□□□□ 0.84
FAM200B-201ENST00000422728 TSHZ2Q9NRE2 1034 aa20.32■□□□□ 0.84
FAM200B-201ENST00000422728 CTTNBP2Q8WZ74 1663 aa20.32■□□□□ 0.84
FAM200B-201ENST00000422728 SIN3AQ96ST3 1273 aa20.31■□□□□ 0.84
FAM200B-201ENST00000422728 BCANQ96GW7 911 aa20.3■□□□□ 0.84
FAM200B-201ENST00000422728 FANCD2Q9BXW9 1451 aa20.29■□□□□ 0.84
FAM200B-201ENST00000422728 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
FAM200B-201ENST00000422728 HIRIP3Q9BW71 556 aaPredicted RBP20.27■□□□□ 0.84
FAM200B-201ENST00000422728 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.83
FAM200B-201ENST00000422728 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
FAM200B-201ENST00000422728 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
FAM200B-201ENST00000422728 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
FAM200B-201ENST00000422728 LRRC9Q6ZRR7 1453 aa20.24■□□□□ 0.83
FAM200B-201ENST00000422728 PHLDB1Q86UU1 1377 aa20.23■□□□□ 0.83
FAM200B-201ENST00000422728 PCF11O94913 1555 aaKnown RBP20.23■□□□□ 0.83
FAM200B-201ENST00000422728 FAM50AQ14320 339 aaKnown RBP20.23■□□□□ 0.83
FAM200B-201ENST00000422728 P3H3Q8IVL6 736 aa20.22■□□□□ 0.83
FAM200B-201ENST00000422728 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
FAM200B-201ENST00000422728 FYCO1Q9BQS8 1478 aa20.21■□□□□ 0.83
FAM200B-201ENST00000422728 SETD5Q9C0A6 1442 aa20.19■□□□□ 0.82
FAM200B-201ENST00000422728 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
FAM200B-201ENST00000422728 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
FAM200B-201ENST00000422728 ATP1B4Q9UN42 357 aaPredicted RBP20.18■□□□□ 0.82
FAM200B-201ENST00000422728 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
FAM200B-201ENST00000422728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.17■□□□□ 0.82
FAM200B-201ENST00000422728 FKBP8Q14318 412 aa20.15■□□□□ 0.82
FAM200B-201ENST00000422728 SAMD9Q5K651 1589 aa20.14■□□□□ 0.81
FAM200B-201ENST00000422728 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
FAM200B-201ENST00000422728 CASKIN1Q8WXD9 1431 aa20.12■□□□□ 0.81
FAM200B-201ENST00000422728 PPP1R15AO75807 674 aaPredicted RBP20.1■□□□□ 0.81
FAM200B-201ENST00000422728 TRIM52Q96A61 297 aa20.1■□□□□ 0.81
FAM200B-201ENST00000422728 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
FAM200B-201ENST00000422728 URB2Q14146 1524 aaKnown RBP20.04■□□□□ 0.8
FAM200B-201ENST00000422728 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
FAM200B-201ENST00000422728 FHOD3Q2V2M9 1422 aa20.03■□□□□ 0.8
FAM200B-201ENST00000422728 ANP32EQ9BTT0 268 aa20.02■□□□□ 0.8
FAM200B-201ENST00000422728 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.79
FAM200B-201ENST00000422728 FMN1Q68DA7 1419 aa20■□□□□ 0.79
FAM200B-201ENST00000422728 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
FAM200B-201ENST00000422728 NESP48681 1621 aa19.96■□□□□ 0.79
FAM200B-201ENST00000422728 ANP32CO43423 234 aa19.93■□□□□ 0.78
FAM200B-201ENST00000422728 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
FAM200B-201ENST00000422728 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
FAM200B-201ENST00000422728 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
FAM200B-201ENST00000422728 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
FAM200B-201ENST00000422728 EHBP1L1Q8N3D4 1523 aa19.9■□□□□ 0.78
FAM200B-201ENST00000422728 SUPT6HQ7KZ85 1726 aaKnown RBP19.89■□□□□ 0.77
FAM200B-201ENST00000422728 RBM19Q9Y4C8 960 aaKnown RBP19.89■□□□□ 0.77
FAM200B-201ENST00000422728 NEFLP07196 543 aa19.89■□□□□ 0.77
FAM200B-201ENST00000422728 PTPRKQ15262 1439 aa19.88■□□□□ 0.77
FAM200B-201ENST00000422728 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
FAM200B-201ENST00000422728 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
FAM200B-201ENST00000422728 CCER2I3L3R5 266 aa19.88■□□□□ 0.77
FAM200B-201ENST00000422728 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
FAM200B-201ENST00000422728 TONSLQ96HA7 1378 aa19.87■□□□□ 0.77
FAM200B-201ENST00000422728 CCDC18Q5T9S5 1454 aa19.84■□□□□ 0.77
FAM200B-201ENST00000422728 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
FAM200B-201ENST00000422728 IRX6P78412 446 aaPredicted RBP19.83■□□□□ 0.76
FAM200B-201ENST00000422728 GCC2Q8IWJ2 1684 aa19.82■□□□□ 0.76
FAM200B-201ENST00000422728 UGGT2Q9NYU1 1516 aa19.82■□□□□ 0.76
FAM200B-201ENST00000422728 HFM1A2PYH4 1435 aa19.81■□□□□ 0.76
FAM200B-201ENST00000422728 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
FAM200B-201ENST00000422728 HECW1Q76N89 1606 aa19.8■□□□□ 0.76
FAM200B-201ENST00000422728 TCOF1Q13428 1488 aaKnown RBP19.8■□□□□ 0.76
FAM200B-201ENST00000422728 MTUS2Q5JR59 1369 aa19.77■□□□□ 0.76
FAM200B-201ENST00000422728 AKNAQ7Z591 1439 aa19.77■□□□□ 0.75
FAM200B-201ENST00000422728 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
FAM200B-201ENST00000422728 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
FAM200B-201ENST00000422728 NCOA2Q15596 1464 aa19.75■□□□□ 0.75
FAM200B-201ENST00000422728 UACAQ9BZF9 1416 aa19.75■□□□□ 0.75
FAM200B-201ENST00000422728 IQGAP2Q13576 1575 aa19.74■□□□□ 0.75
FAM200B-201ENST00000422728 KDM5BQ9UGL1 1544 aa19.73■□□□□ 0.75
FAM200B-201ENST00000422728 NAIPQ13075 1403 aa19.73■□□□□ 0.75
FAM200B-201ENST00000422728 MSH5O43196 834 aa19.71■□□□□ 0.75
FAM200B-201ENST00000422728 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
FAM200B-201ENST00000422728 RRP7BPQ9NSQ0 103 aa19.71■□□□□ 0.75
FAM200B-201ENST00000422728 MAGI3Q5TCQ9 1506 aa19.7■□□□□ 0.74
FAM200B-201ENST00000422728 CCDC184Q52MB2 194 aa19.69■□□□□ 0.74
FAM200B-201ENST00000422728 WASHC2AQ641Q2 1341 aa19.69■□□□□ 0.74
FAM200B-201ENST00000422728 WDR62O43379 1518 aa19.69■□□□□ 0.74
FAM200B-201ENST00000422728 HSPA5P11021 654 aaKnown RBP19.67■□□□□ 0.74
FAM200B-201ENST00000422728 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
FAM200B-201ENST00000422728 TDRD9Q8NDG6 1382 aaKnown RBP19.65■□□□□ 0.74
FAM200B-201ENST00000422728 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
FAM200B-201ENST00000422728 FOXD1Q16676 465 aa19.63■□□□□ 0.73
FAM200B-201ENST00000422728 BCL11AQ9H165 835 aa19.63■□□□□ 0.73
FAM200B-201ENST00000422728 DENND4BO75064 1496 aaPredicted RBP19.62■□□□□ 0.73
FAM200B-201ENST00000422728 EPRSP07814 1512 aaKnown RBP19.6■□□□□ 0.73
FAM200B-201ENST00000422728 C11orf95C9JLR9 678 aaPredicted RBP19.6■□□□□ 0.73
FAM200B-201ENST00000422728 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
FAM200B-201ENST00000422728 KDM6BO15054 1643 aa19.59■□□□□ 0.73
FAM200B-201ENST00000422728 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
FAM200B-201ENST00000422728 KIAA0556O60303 1618 aa19.57■□□□□ 0.72
FAM200B-201ENST00000422728 FAM9BQ8IZU0 186 aa19.54■□□□□ 0.72
FAM200B-201ENST00000422728 L3MBTL2Q969R5 705 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms