RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 FHAD1B1AJZ9 1412 aa9.28□□□□□ -0.92
ATP2C1-203ENST00000422190 PDS5BQ9NTI5 1447 aa9.28□□□□□ -0.92
ATP2C1-203ENST00000422190 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
ATP2C1-203ENST00000422190 NEUROD1Q13562 356 aa9.27□□□□□ -0.93
ATP2C1-203ENST00000422190 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
ATP2C1-203ENST00000422190 ACIN1Q9UKV3 1341 aaKnown RBP9.26□□□□□ -0.93
ATP2C1-203ENST00000422190 CLSPNQ9HAW4 1339 aa9.26□□□□□ -0.93
ATP2C1-203ENST00000422190 LRRC9Q6ZRR7 1453 aa9.26□□□□□ -0.93
ATP2C1-203ENST00000422190 PHLDB1Q86UU1 1377 aa9.26□□□□□ -0.93
ATP2C1-203ENST00000422190 CENPBP07199 599 aaPredicted RBP9.25□□□□□ -0.93
ATP2C1-203ENST00000422190 YTHDC1Q96MU7 727 aaKnown RBP9.24□□□□□ -0.93
ATP2C1-203ENST00000422190 MIER1Q8N108 512 aa9.24□□□□□ -0.93
ATP2C1-203ENST00000422190 GAPVD1Q14C86 1478 aa9.23□□□□□ -0.93
ATP2C1-203ENST00000422190 MAP3K1Q13233 1512 aa9.23□□□□□ -0.93
ATP2C1-203ENST00000422190 RAB3GAP2Q9H2M9 1393 aa9.23□□□□□ -0.93
ATP2C1-203ENST00000422190 PCF11O94913 1555 aaKnown RBP9.23□□□□□ -0.93
ATP2C1-203ENST00000422190 CUL7Q14999 1698 aa9.21□□□□□ -0.93
ATP2C1-203ENST00000422190 CASKIN1Q8WXD9 1431 aa9.2□□□□□ -0.94
ATP2C1-203ENST00000422190 EFCAB5A4FU69 1503 aa9.19□□□□□ -0.94
ATP2C1-203ENST00000422190 SETD5Q9C0A6 1442 aa9.19□□□□□ -0.94
ATP2C1-203ENST00000422190 FMN1Q68DA7 1419 aa9.19□□□□□ -0.94
ATP2C1-203ENST00000422190 FYCO1Q9BQS8 1478 aa9.19□□□□□ -0.94
ATP2C1-203ENST00000422190 MTUS2Q5JR59 1369 aa9.18□□□□□ -0.94
ATP2C1-203ENST00000422190 KIF21AQ7Z4S6 1674 aa9.18□□□□□ -0.94
ATP2C1-203ENST00000422190 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
ATP2C1-203ENST00000422190 ABCA5Q8WWZ7 1642 aa9.17□□□□□ -0.94
ATP2C1-203ENST00000422190 AQRO60306 1485 aaKnown RBP eCLIP9.17□□□□□ -0.942e-7■■■■■ 32.8
ATP2C1-203ENST00000422190 WDR97A6NE52 1622 aa9.17□□□□□ -0.94
ATP2C1-203ENST00000422190 CTTNBP2Q8WZ74 1663 aa9.16□□□□□ -0.94
ATP2C1-203ENST00000422190 SIN3AQ96ST3 1273 aa9.16□□□□□ -0.94
ATP2C1-203ENST00000422190 CFAP43Q8NDM7 1665 aa9.15□□□□□ -0.94
ATP2C1-203ENST00000422190 ARID3CA6NKF2 412 aa9.15□□□□□ -0.94
ATP2C1-203ENST00000422190 SNAPC4Q5SXM2 1469 aa9.13□□□□□ -0.95
ATP2C1-203ENST00000422190 TARBP1Q13395 1621 aaKnown RBP9.12□□□□□ -0.95
ATP2C1-203ENST00000422190 FGD6Q6ZV73 1430 aa9.12□□□□□ -0.95
ATP2C1-203ENST00000422190 MRC2Q9UBG0 1479 aa9.12□□□□□ -0.95
ATP2C1-203ENST00000422190 MAPKBP1O60336 1514 aa9.12□□□□□ -0.95
ATP2C1-203ENST00000422190 SAMD9Q5K651 1589 aa9.1□□□□□ -0.95
ATP2C1-203ENST00000422190 GRIN2BQ13224 1484 aa9.09□□□□□ -0.95
ATP2C1-203ENST00000422190 NCOA2Q15596 1464 aa9.09□□□□□ -0.95
ATP2C1-203ENST00000422190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.09□□□□□ -0.95
ATP2C1-203ENST00000422190 ZNF608Q9ULD9 1512 aaPredicted RBP9.08□□□□□ -0.96
ATP2C1-203ENST00000422190 CHIC2Q9UKJ5 165 aa9.08□□□□□ -0.96
ATP2C1-203ENST00000422190 PTPRKQ15262 1439 aa9.07□□□□□ -0.96
ATP2C1-203ENST00000422190 MYOM3Q5VTT5 1437 aa9.07□□□□□ -0.96
ATP2C1-203ENST00000422190 RRP7BPQ9NSQ0 103 aa9.07□□□□□ -0.96
ATP2C1-203ENST00000422190 FBLN2P98095 1184 aa9.06□□□□□ -0.96
ATP2C1-203ENST00000422190 PBRM1Q86U86 1689 aa9.05□□□□□ -0.96
ATP2C1-203ENST00000422190 IQGAP2Q13576 1575 aa9.05□□□□□ -0.96
ATP2C1-203ENST00000422190 HIRIP3Q9BW71 556 aaPredicted RBP9.05□□□□□ -0.96
ATP2C1-203ENST00000422190 ADAMTS12P58397 1594 aa9.05□□□□□ -0.96
ATP2C1-203ENST00000422190 IFT140Q96RY7 1462 aa9.05□□□□□ -0.96
ATP2C1-203ENST00000422190 ERCC6Q03468 1493 aa9.04□□□□□ -0.96
ATP2C1-203ENST00000422190 CCDC18Q5T9S5 1454 aa9.04□□□□□ -0.96
ATP2C1-203ENST00000422190 LRRIQ1Q96JM4 1722 aa9.04□□□□□ -0.96
ATP2C1-203ENST00000422190 PPP1R15AO75807 674 aaPredicted RBP9.04□□□□□ -0.96
ATP2C1-203ENST00000422190 EHBP1L1Q8N3D4 1523 aa9.04□□□□□ -0.96
ATP2C1-203ENST00000422190 MAGI3Q5TCQ9 1506 aa9.03□□□□□ -0.96
ATP2C1-203ENST00000422190 DDX10Q13206 875 aaKnown RBP9.03□□□□□ -0.96
ATP2C1-203ENST00000422190 CHMP7Q8WUX9 453 aaPredicted RBP9.03□□□□□ -0.96
ATP2C1-203ENST00000422190 TRIM52Q96A61 297 aa9.03□□□□□ -0.96
ATP2C1-203ENST00000422190 HFM1A2PYH4 1435 aa9.03□□□□□ -0.96
ATP2C1-203ENST00000422190 CDK13Q14004 1512 aaKnown RBP9.03□□□□□ -0.96
ATP2C1-203ENST00000422190 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
ATP2C1-203ENST00000422190 SUPT6HQ7KZ85 1726 aaKnown RBP9.02□□□□□ -0.96
ATP2C1-203ENST00000422190 EPRSP07814 1512 aaKnown RBP9.02□□□□□ -0.96
ATP2C1-203ENST00000422190 THOC2Q8NI27 1593 aaKnown RBP9.02□□□□□ -0.97
ATP2C1-203ENST00000422190 TONSLQ96HA7 1378 aa9.02□□□□□ -0.97
ATP2C1-203ENST00000422190 NAIPQ13075 1403 aa9.02□□□□□ -0.97
ATP2C1-203ENST00000422190 UGGT2Q9NYU1 1516 aa9.01□□□□□ -0.97
ATP2C1-203ENST00000422190 HECW1Q76N89 1606 aa9□□□□□ -0.97
ATP2C1-203ENST00000422190 UACAQ9BZF9 1416 aa9□□□□□ -0.97
ATP2C1-203ENST00000422190 WDR62O43379 1518 aa9□□□□□ -0.97
ATP2C1-203ENST00000422190 PTPN23Q9H3S7 1636 aa9□□□□□ -0.97
ATP2C1-203ENST00000422190 KIAA0586Q9BVV6 1533 aa9□□□□□ -0.97
ATP2C1-203ENST00000422190 KCNH8Q96L42 1107 aa8.99□□□□□ -0.97
ATP2C1-203ENST00000422190 GRIN2AQ12879 1464 aa8.98□□□□□ -0.97
ATP2C1-203ENST00000422190 CDK11AQ9UQ88 783 aaPredicted RBP8.98□□□□□ -0.97
ATP2C1-203ENST00000422190 ARHGEF11O15085 1522 aa8.97□□□□□ -0.97
ATP2C1-203ENST00000422190 ZNF644Q9H582 1327 aaPredicted RBP8.97□□□□□ -0.97
ATP2C1-203ENST00000422190 DISP1Q96F81 1524 aa8.97□□□□□ -0.97
ATP2C1-203ENST00000422190 EIF4G3O43432 1585 aaKnown RBP8.96□□□□□ -0.98
ATP2C1-203ENST00000422190 FOXD1Q16676 465 aa8.95□□□□□ -0.98
ATP2C1-203ENST00000422190 JPH4Q96JJ6 628 aa8.95□□□□□ -0.98
ATP2C1-203ENST00000422190 TCOF1Q13428 1488 aaKnown RBP8.95□□□□□ -0.98
ATP2C1-203ENST00000422190 MIA2Q96PC5 1412 aa8.95□□□□□ -0.98
ATP2C1-203ENST00000422190 ZNF777Q9ULD5 760 aaPredicted RBP8.95□□□□□ -0.98
ATP2C1-203ENST00000422190 KIAA0556O60303 1618 aa8.95□□□□□ -0.98
ATP2C1-203ENST00000422190 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
ATP2C1-203ENST00000422190 MPHOSPH9Q99550 1183 aa8.94□□□□□ -0.98
ATP2C1-203ENST00000422190 NUP153P49790 1475 aaKnown RBP8.94□□□□□ -0.98
ATP2C1-203ENST00000422190 PRG4Q92954 1404 aaPredicted RBP8.93□□□□□ -0.98
ATP2C1-203ENST00000422190 CFDP1Q9UEE9 299 aaPredicted RBP8.93□□□□□ -0.98
ATP2C1-203ENST00000422190 MAGI1Q96QZ7 1491 aaPredicted RBP8.92□□□□□ -0.98
ATP2C1-203ENST00000422190 SYNJ2O15056 1496 aa8.92□□□□□ -0.98
ATP2C1-203ENST00000422190 PLB1Q6P1J6 1458 aa8.92□□□□□ -0.98
ATP2C1-203ENST00000422190 ANP32CO43423 234 aa8.91□□□□□ -0.98
ATP2C1-203ENST00000422190 CARMIL2Q6F5E8 1435 aa8.91□□□□□ -0.98
ATP2C1-203ENST00000422190 KDM6BO15054 1643 aa8.9□□□□□ -0.98
ATP2C1-203ENST00000422190 RAPGEF6Q8TEU7 1601 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms