RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CFDP1Q9UEE9 299 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-206ENST00000421141 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
PTCH1-206ENST00000421141 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-206ENST00000421141 DIEXFQ68CQ4 756 aaKnown RBP14.82□□□□□ -0.04
PTCH1-206ENST00000421141 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
PTCH1-206ENST00000421141 C14orf37Q86TY3 774 aa14.81□□□□□ -0.04
PTCH1-206ENST00000421141 CLSPNQ9HAW4 1339 aa14.8□□□□□ -0.04
PTCH1-206ENST00000421141 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
PTCH1-206ENST00000421141 CEP162Q5TB80 1403 aa14.79□□□□□ -0.04
PTCH1-206ENST00000421141 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
PTCH1-206ENST00000421141 FANCD2Q9BXW9 1451 aa14.77□□□□□ -0.05
PTCH1-206ENST00000421141 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
PTCH1-206ENST00000421141 RRP7BPQ9NSQ0 103 aa14.71□□□□□ -0.05
PTCH1-206ENST00000421141 PRDM2Q13029 1718 aa14.71□□□□□ -0.05
PTCH1-206ENST00000421141 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
PTCH1-206ENST00000421141 CCNB3Q8WWL7 1395 aa14.71□□□□□ -0.05
PTCH1-206ENST00000421141 TDRD9Q8NDG6 1382 aaKnown RBP14.7□□□□□ -0.06
PTCH1-206ENST00000421141 TNIKQ9UKE5 1360 aa14.69□□□□□ -0.06
PTCH1-206ENST00000421141 KANK1Q14678 1352 aa14.69□□□□□ -0.06
PTCH1-206ENST00000421141 HAP1P54257 671 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-206ENST00000421141 ZNF316A6NFI3 1004 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-206ENST00000421141 FMN1Q68DA7 1419 aa14.62□□□□□ -0.07
PTCH1-206ENST00000421141 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
PTCH1-206ENST00000421141 SENP3Q9H4L4 574 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-206ENST00000421141 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
PTCH1-206ENST00000421141 MLECQ14165 292 aa14.59□□□□□ -0.07
PTCH1-206ENST00000421141 A0A0G2JS52 829 aa14.58□□□□□ -0.07
PTCH1-206ENST00000421141 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
PTCH1-206ENST00000421141 ARHGAP35Q9NRY4 1499 aa14.56□□□□□ -0.08
PTCH1-206ENST00000421141 ZBTB7CA1YPR0 619 aa14.55□□□□□ -0.08
PTCH1-206ENST00000421141 RGL3Q3MIN7 710 aa14.54□□□□□ -0.08
PTCH1-206ENST00000421141 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
PTCH1-206ENST00000421141 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
PTCH1-206ENST00000421141 GAPVD1Q14C86 1478 aa14.53□□□□□ -0.08
PTCH1-206ENST00000421141 BCL11AQ9H165 835 aa14.53□□□□□ -0.08
PTCH1-206ENST00000421141 NPM2Q86SE8 214 aaKnown RBP14.53□□□□□ -0.08
PTCH1-206ENST00000421141 TMC1Q8TDI8 760 aa14.51□□□□□ -0.09
PTCH1-206ENST00000421141 CDCA8Q53HL2 280 aa14.51□□□□□ -0.09
PTCH1-206ENST00000421141 JPH4Q96JJ6 628 aa14.51□□□□□ -0.09
PTCH1-206ENST00000421141 WDR43Q15061 677 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTCH1-206ENST00000421141 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
PTCH1-206ENST00000421141 CCDC18Q5T9S5 1454 aa14.5□□□□□ -0.09
PTCH1-206ENST00000421141 EFCAB2Q5VUJ9 269 aa14.49□□□□□ -0.09
PTCH1-206ENST00000421141 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
PTCH1-206ENST00000421141 POGKQ9P215 609 aa14.49□□□□□ -0.09
PTCH1-206ENST00000421141 CYB5RLQ6IPT4 315 aa14.48□□□□□ -0.09
PTCH1-206ENST00000421141 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
PTCH1-206ENST00000421141 EIF4G2P78344 907 aaKnown RBP eCLIP14.45□□□□□ -0.14e-7■□□□□ 8.6
PTCH1-206ENST00000421141 GGT6Q6P531 493 aa14.45□□□□□ -0.1
PTCH1-206ENST00000421141 LMOD2Q6P5Q4 547 aa14.42□□□□□ -0.1
PTCH1-206ENST00000421141 LAMC3Q9Y6N6 1575 aa14.42□□□□□ -0.1
PTCH1-206ENST00000421141 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
PTCH1-206ENST00000421141 PTPRGP23470 1445 aa14.4□□□□□ -0.1
PTCH1-206ENST00000421141 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
PTCH1-206ENST00000421141 RSPH4AQ5TD94 716 aa14.37□□□□□ -0.11
PTCH1-206ENST00000421141 CARD11Q9BXL7 1154 aa14.36□□□□□ -0.11
PTCH1-206ENST00000421141 KNSTRNQ9Y448 316 aa14.36□□□□□ -0.11
PTCH1-206ENST00000421141 GRIN2BQ13224 1484 aa14.36□□□□□ -0.11
PTCH1-206ENST00000421141 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
PTCH1-206ENST00000421141 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
PTCH1-206ENST00000421141 AEBP2Q6ZN18 517 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-206ENST00000421141 FHOD3Q2V2M9 1422 aa14.35□□□□□ -0.11
PTCH1-206ENST00000421141 ANKRD30AQ9BXX3 1397 aa14.35□□□□□ -0.11
PTCH1-206ENST00000421141 FAM9BQ8IZU0 186 aa14.35□□□□□ -0.11
PTCH1-206ENST00000421141 BICRAQ9NZM4 1560 aa14.35□□□□□ -0.11
PTCH1-206ENST00000421141 SPAG9O60271 1321 aaKnown RBP14.34□□□□□ -0.11
PTCH1-206ENST00000421141 NESP48681 1621 aa14.34□□□□□ -0.11
PTCH1-206ENST00000421141 IFT140Q96RY7 1462 aa14.34□□□□□ -0.11
PTCH1-206ENST00000421141 EID1Q9Y6B2 187 aa14.34□□□□□ -0.11
PTCH1-206ENST00000421141 MYT1Q01538 1121 aa14.33□□□□□ -0.12
PTCH1-206ENST00000421141 PPM1GO15355 546 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-206ENST00000421141 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-206ENST00000421141 DNMBPQ6XZF7 1577 aa14.31□□□□□ -0.12
PTCH1-206ENST00000421141 CFTRP13569 1480 aa14.31□□□□□ -0.12
PTCH1-206ENST00000421141 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.123e-7■■■□□ 17
PTCH1-206ENST00000421141 SALL2Q9Y467 1007 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-206ENST00000421141 WASHC2CQ9Y4E1 1318 aa14.3□□□□□ -0.12
PTCH1-206ENST00000421141 DCAF11Q8TEB1 546 aa14.29□□□□□ -0.12
PTCH1-206ENST00000421141 HNRNPUQ00839 825 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTCH1-206ENST00000421141 KIF3BO15066 747 aa14.28□□□□□ -0.12
PTCH1-206ENST00000421141 HNRNPMP52272 730 aaKnown RBP eCLIP14.27□□□□□ -0.12
PTCH1-206ENST00000421141 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.13
PTCH1-206ENST00000421141 SRPK2P78362 688 aaKnown RBP14.26□□□□□ -0.13
PTCH1-206ENST00000421141 MRS2Q9HD23 443 aa14.26□□□□□ -0.13
PTCH1-206ENST00000421141 MYH16Q9H6N6 1097 aa14.25□□□□□ -0.13
PTCH1-206ENST00000421141 SETD5Q9C0A6 1442 aa14.25□□□□□ -0.13
PTCH1-206ENST00000421141 TOP2BQ02880 1626 aa14.25□□□□□ -0.13
PTCH1-206ENST00000421141 TOPBP1Q92547 1522 aa14.25□□□□□ -0.13
PTCH1-206ENST00000421141 NUP155O75694 1391 aa14.24□□□□□ -0.13
PTCH1-206ENST00000421141 ARXQ96QS3 562 aa14.24□□□□□ -0.13
PTCH1-206ENST00000421141 NPHP1O15259 732 aa14.23□□□□□ -0.13
PTCH1-206ENST00000421141 PNNQ9H307 717 aaKnown RBP14.23□□□□□ -0.13
PTCH1-206ENST00000421141 NUDCQ9Y266 331 aa14.23□□□□□ -0.13
PTCH1-206ENST00000421141 RTL5Q5HYW3 569 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-206ENST00000421141 TMF1P82094 1093 aa14.22□□□□□ -0.13
PTCH1-206ENST00000421141 CUL7Q14999 1698 aa14.22□□□□□ -0.13
PTCH1-206ENST00000421141 HIRIP3Q9BW71 556 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-206ENST00000421141 STK26Q9P289 416 aa14.21□□□□□ -0.13
PTCH1-206ENST00000421141 CUX1P39880 1505 aa14.21□□□□□ -0.14
PTCH1-206ENST00000421141 PKD2Q13563 968 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms