RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 PCF11O94913 1555 aaKnown RBP24.14■■□□□ 1.45
CTSB-203ENST00000420692 CTTNBP2Q8WZ74 1663 aa24.13■■□□□ 1.45
CTSB-203ENST00000420692 DIEXFQ68CQ4 756 aaKnown RBP24.12■■□□□ 1.45
CTSB-203ENST00000420692 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
CTSB-203ENST00000420692 FHOD3Q2V2M9 1422 aa24.12■■□□□ 1.45
CTSB-203ENST00000420692 LRRC9Q6ZRR7 1453 aa24.12■■□□□ 1.45
CTSB-203ENST00000420692 DHX57Q6P158 1386 aaKnown RBP24.11■■□□□ 1.45
CTSB-203ENST00000420692 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
CTSB-203ENST00000420692 EFCAB5A4FU69 1503 aa24.09■■□□□ 1.45
CTSB-203ENST00000420692 ZNF316A6NFI3 1004 aaPredicted RBP24.08■■□□□ 1.45
CTSB-203ENST00000420692 CFAP43Q8NDM7 1665 aa24.08■■□□□ 1.45
CTSB-203ENST00000420692 TARBP1Q13395 1621 aaKnown RBP24.08■■□□□ 1.45
CTSB-203ENST00000420692 PHLDB1Q86UU1 1377 aa24.04■■□□□ 1.44
CTSB-203ENST00000420692 CASKIN1Q8WXD9 1431 aa24.01■■□□□ 1.43
CTSB-203ENST00000420692 FYCO1Q9BQS8 1478 aa24.01■■□□□ 1.43
CTSB-203ENST00000420692 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.432e-8■■□□□ 12.7
CTSB-203ENST00000420692 CLSPNQ9HAW4 1339 aa24■■□□□ 1.43
CTSB-203ENST00000420692 ITGAEP38570 1179 aa23.98■■□□□ 1.43
CTSB-203ENST00000420692 SAMD9Q5K651 1589 aa23.96■■□□□ 1.43
CTSB-203ENST00000420692 ATP1B4Q9UN42 357 aaPredicted RBP23.96■■□□□ 1.43
CTSB-203ENST00000420692 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
CTSB-203ENST00000420692 FMN1Q68DA7 1419 aa23.91■■□□□ 1.42
CTSB-203ENST00000420692 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
CTSB-203ENST00000420692 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
CTSB-203ENST00000420692 RAB3GAP2Q9H2M9 1393 aa23.88■■□□□ 1.41
CTSB-203ENST00000420692 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
CTSB-203ENST00000420692 FAM50AQ14320 339 aaKnown RBP23.83■■□□□ 1.4
CTSB-203ENST00000420692 GRIN2BQ13224 1484 aa23.82■■□□□ 1.4
CTSB-203ENST00000420692 SETD5Q9C0A6 1442 aa23.81■■□□□ 1.4
CTSB-203ENST00000420692 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
CTSB-203ENST00000420692 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
CTSB-203ENST00000420692 MAPKBP1O60336 1514 aa23.79■■□□□ 1.4
CTSB-203ENST00000420692 ZNF608Q9ULD9 1512 aaPredicted RBP23.76■■□□□ 1.39
CTSB-203ENST00000420692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.76■■□□□ 1.39
CTSB-203ENST00000420692 WDR62O43379 1518 aa23.75■■□□□ 1.39
CTSB-203ENST00000420692 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
CTSB-203ENST00000420692 FGD6Q6ZV73 1430 aa23.72■■□□□ 1.39
CTSB-203ENST00000420692 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
CTSB-203ENST00000420692 THOC2Q8NI27 1593 aaKnown RBP23.71■■□□□ 1.39
CTSB-203ENST00000420692 MTUS2Q5JR59 1369 aa23.71■■□□□ 1.39
CTSB-203ENST00000420692 IQGAP2Q13576 1575 aa23.71■■□□□ 1.39
CTSB-203ENST00000420692 MIER1Q8N108 512 aa23.71■■□□□ 1.39
CTSB-203ENST00000420692 ACIN1Q9UKV3 1341 aaKnown RBP23.71■■□□□ 1.39
CTSB-203ENST00000420692 MAGI3Q5TCQ9 1506 aa23.67■■□□□ 1.38
CTSB-203ENST00000420692 NCOA2Q15596 1464 aa23.66■■□□□ 1.38
CTSB-203ENST00000420692 PTPRKQ15262 1439 aa23.64■■□□□ 1.38
CTSB-203ENST00000420692 EHBP1L1Q8N3D4 1523 aa23.61■■□□□ 1.37
CTSB-203ENST00000420692 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
CTSB-203ENST00000420692 SUPT6HQ7KZ85 1726 aaKnown RBP23.61■■□□□ 1.37
CTSB-203ENST00000420692 MYOM3Q5VTT5 1437 aa23.61■■□□□ 1.37
CTSB-203ENST00000420692 UGGT2Q9NYU1 1516 aa23.6■■□□□ 1.37
CTSB-203ENST00000420692 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
CTSB-203ENST00000420692 CCDC18Q5T9S5 1454 aa23.57■■□□□ 1.36
CTSB-203ENST00000420692 HECW1Q76N89 1606 aa23.56■■□□□ 1.36
CTSB-203ENST00000420692 SIN3AQ96ST3 1273 aa23.56■■□□□ 1.36
CTSB-203ENST00000420692 EPRSP07814 1512 aaKnown RBP23.56■■□□□ 1.36
CTSB-203ENST00000420692 CENPBP07199 599 aaPredicted RBP23.53■■□□□ 1.36
CTSB-203ENST00000420692 KIAA0586Q9BVV6 1533 aa23.53■■□□□ 1.36
CTSB-203ENST00000420692 DISP1Q96F81 1524 aa23.52■■□□□ 1.36
CTSB-203ENST00000420692 CDK13Q14004 1512 aaKnown RBP23.52■■□□□ 1.36
CTSB-203ENST00000420692 ERCC6Q03468 1493 aa23.52■■□□□ 1.36
CTSB-203ENST00000420692 PTPN23Q9H3S7 1636 aa23.51■■□□□ 1.35
CTSB-203ENST00000420692 GRIN2AQ12879 1464 aa23.51■■□□□ 1.35
CTSB-203ENST00000420692 HFM1A2PYH4 1435 aa23.51■■□□□ 1.35
CTSB-203ENST00000420692 KIAA0556O60303 1618 aa23.47■■□□□ 1.35
CTSB-203ENST00000420692 NAIPQ13075 1403 aa23.47■■□□□ 1.35
CTSB-203ENST00000420692 TCOF1Q13428 1488 aaKnown RBP23.45■■□□□ 1.34
CTSB-203ENST00000420692 YTHDC1Q96MU7 727 aaKnown RBP23.45■■□□□ 1.34
CTSB-203ENST00000420692 ARID3CA6NKF2 412 aa23.44■■□□□ 1.34
CTSB-203ENST00000420692 MAGI1Q96QZ7 1491 aaPredicted RBP23.41■■□□□ 1.34
CTSB-203ENST00000420692 UACAQ9BZF9 1416 aa23.4■■□□□ 1.34
CTSB-203ENST00000420692 CEP170Q5SW79 1584 aa23.39■■□□□ 1.34
CTSB-203ENST00000420692 NUP153P49790 1475 aaKnown RBP23.38■■□□□ 1.33
CTSB-203ENST00000420692 TIMELESSQ9UNS1 1208 aa23.38■■□□□ 1.33
CTSB-203ENST00000420692 GTF3C3Q9Y5Q9 886 aa23.38■■□□□ 1.33
CTSB-203ENST00000420692 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
CTSB-203ENST00000420692 MIA2Q96PC5 1412 aa23.34■■□□□ 1.33
CTSB-203ENST00000420692 RAPGEF6Q8TEU7 1601 aa23.34■■□□□ 1.33
CTSB-203ENST00000420692 PPP1R15AO75807 674 aaPredicted RBP23.33■■□□□ 1.33
CTSB-203ENST00000420692 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
CTSB-203ENST00000420692 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
CTSB-203ENST00000420692 CHIC2Q9UKJ5 165 aa23.32■■□□□ 1.32
CTSB-203ENST00000420692 GCC2Q8IWJ2 1684 aa23.3■■□□□ 1.32
CTSB-203ENST00000420692 KDM6BO15054 1643 aa23.3■■□□□ 1.32
CTSB-203ENST00000420692 NUP160Q12769 1436 aa23.28■■□□□ 1.32
CTSB-203ENST00000420692 DENND4BO75064 1496 aaPredicted RBP23.27■■□□□ 1.32
CTSB-203ENST00000420692 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
CTSB-203ENST00000420692 FBLN2P98095 1184 aa23.26■■□□□ 1.31
CTSB-203ENST00000420692 PLB1Q6P1J6 1458 aa23.25■■□□□ 1.31
CTSB-203ENST00000420692 JPH4Q96JJ6 628 aa23.22■■□□□ 1.31
CTSB-203ENST00000420692 ZNF644Q9H582 1327 aaPredicted RBP23.21■■□□□ 1.31
CTSB-203ENST00000420692 KDM5BQ9UGL1 1544 aa23.21■■□□□ 1.31
CTSB-203ENST00000420692 PRG4Q92954 1404 aaPredicted RBP23.21■■□□□ 1.31
CTSB-203ENST00000420692 TONSLQ96HA7 1378 aa23.19■■□□□ 1.3
CTSB-203ENST00000420692 DAPK1P53355 1430 aa23.18■■□□□ 1.3
CTSB-203ENST00000420692 ABCC5O15440 1437 aa23.18■■□□□ 1.3
CTSB-203ENST00000420692 TROQ12816 1431 aaPredicted RBP23.17■■□□□ 1.3
CTSB-203ENST00000420692 DNMT1P26358 1616 aaKnown RBP23.17■■□□□ 1.3
CTSB-203ENST00000420692 HIRIP3Q9BW71 556 aaPredicted RBP23.16■■□□□ 1.3
CTSB-203ENST00000420692 CDK11AQ9UQ88 783 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms