RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
NCKIPSD-202ENST00000413374 TTBK1Q5TCY1 1321 aaPredicted RBP17.26■□□□□ 0.35
NCKIPSD-202ENST00000413374 KIAA0586Q9BVV6 1533 aa17.22■□□□□ 0.35
NCKIPSD-202ENST00000413374 CUL7Q14999 1698 aa17.22■□□□□ 0.35
NCKIPSD-202ENST00000413374 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
NCKIPSD-202ENST00000413374 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
NCKIPSD-202ENST00000413374 NPM1P06748 294 aaKnown RBP eCLIP17.14■□□□□ 0.33
NCKIPSD-202ENST00000413374 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
NCKIPSD-202ENST00000413374 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
NCKIPSD-202ENST00000413374 PTPRGP23470 1445 aa17.1■□□□□ 0.33
NCKIPSD-202ENST00000413374 CARMIL2Q6F5E8 1435 aa17.08■□□□□ 0.32
NCKIPSD-202ENST00000413374 TNIKQ9UKE5 1360 aa17.06■□□□□ 0.32
NCKIPSD-202ENST00000413374 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
NCKIPSD-202ENST00000413374 IQGAP2Q13576 1575 aa17.05■□□□□ 0.32
NCKIPSD-202ENST00000413374 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
NCKIPSD-202ENST00000413374 FAM69CQ0P6D2 419 aa17.02■□□□□ 0.32
NCKIPSD-202ENST00000413374 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
NCKIPSD-202ENST00000413374 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
NCKIPSD-202ENST00000413374 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
NCKIPSD-202ENST00000413374 P3H3Q8IVL6 736 aa17■□□□□ 0.31
NCKIPSD-202ENST00000413374 ADCY10Q96PN6 1610 aa16.97■□□□□ 0.31
NCKIPSD-202ENST00000413374 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.3
NCKIPSD-202ENST00000413374 UACAQ9BZF9 1416 aa16.94■□□□□ 0.3
NCKIPSD-202ENST00000413374 EEA1Q15075 1411 aa16.92■□□□□ 0.3
NCKIPSD-202ENST00000413374 ABCC10Q5T3U5 1492 aa16.9■□□□□ 0.3
NCKIPSD-202ENST00000413374 KIAA0556O60303 1618 aa16.89■□□□□ 0.29
NCKIPSD-202ENST00000413374 ABCC2Q92887 1545 aa16.88■□□□□ 0.29
NCKIPSD-202ENST00000413374 ARID3CA6NKF2 412 aa16.88■□□□□ 0.29
NCKIPSD-202ENST00000413374 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
NCKIPSD-202ENST00000413374 MAPKBP1O60336 1514 aa16.86■□□□□ 0.29
NCKIPSD-202ENST00000413374 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
NCKIPSD-202ENST00000413374 UHRF1BP1LA0JNW5 1464 aa16.86■□□□□ 0.29
NCKIPSD-202ENST00000413374 PLB1Q6P1J6 1458 aa16.86■□□□□ 0.29
NCKIPSD-202ENST00000413374 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-202ENST00000413374 CTTNBP2Q8WZ74 1663 aa16.84■□□□□ 0.29
NCKIPSD-202ENST00000413374 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
NCKIPSD-202ENST00000413374 DIP2BQ9P265 1576 aa16.8■□□□□ 0.28
NCKIPSD-202ENST00000413374 KIF13AQ9H1H9 1805 aa16.8■□□□□ 0.28
NCKIPSD-202ENST00000413374 KDM5BQ9UGL1 1544 aa16.79■□□□□ 0.28
NCKIPSD-202ENST00000413374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
NCKIPSD-202ENST00000413374 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
NCKIPSD-202ENST00000413374 FHOD3Q2V2M9 1422 aa16.73■□□□□ 0.27
NCKIPSD-202ENST00000413374 ABCA8O94911 1581 aa16.72■□□□□ 0.27
NCKIPSD-202ENST00000413374 EPRSP07814 1512 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-202ENST00000413374 ZCCHC11Q5TAX3 1644 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-202ENST00000413374 KIF21BO75037 1637 aa16.7■□□□□ 0.26
NCKIPSD-202ENST00000413374 ATP1B4Q9UN42 357 aaPredicted RBP16.69■□□□□ 0.26
NCKIPSD-202ENST00000413374 TSPOAP1O95153 1857 aa16.69■□□□□ 0.26
NCKIPSD-202ENST00000413374 ATP10BO94823 1461 aa16.68■□□□□ 0.26
NCKIPSD-202ENST00000413374 WDR7Q9Y4E6 1490 aa16.68■□□□□ 0.26
NCKIPSD-202ENST00000413374 SAMD9Q5K651 1589 aa16.68■□□□□ 0.26
NCKIPSD-202ENST00000413374 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-202ENST00000413374 GLI2P10070 1586 aa16.66■□□□□ 0.26
NCKIPSD-202ENST00000413374 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
NCKIPSD-202ENST00000413374 PLEKHD1A6NEE1 506 aa16.61■□□□□ 0.25
NCKIPSD-202ENST00000413374 KDM6BO15054 1643 aa16.6■□□□□ 0.25
NCKIPSD-202ENST00000413374 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
NCKIPSD-202ENST00000413374 NUP153P49790 1475 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-202ENST00000413374 COL17A1Q9UMD9 1497 aaPredicted RBP16.59■□□□□ 0.25
NCKIPSD-202ENST00000413374 EFCAB5A4FU69 1503 aa16.57■□□□□ 0.24
NCKIPSD-202ENST00000413374 ARHGAP35Q9NRY4 1499 aa16.56■□□□□ 0.24
NCKIPSD-202ENST00000413374 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-202ENST00000413374 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
NCKIPSD-202ENST00000413374 TEX14Q8IWB6 1497 aa16.55■□□□□ 0.24
NCKIPSD-202ENST00000413374 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
NCKIPSD-202ENST00000413374 KDM4FA0A1W2PPD8 638 aa16.5■□□□□ 0.23
NCKIPSD-202ENST00000413374 FMN1Q68DA7 1419 aa16.5■□□□□ 0.23
NCKIPSD-202ENST00000413374 CDK13Q14004 1512 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-202ENST00000413374 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.23
NCKIPSD-202ENST00000413374 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
NCKIPSD-202ENST00000413374 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
NCKIPSD-202ENST00000413374 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
NCKIPSD-202ENST00000413374 CLIP1P30622 1438 aa16.44■□□□□ 0.22
NCKIPSD-202ENST00000413374 ABCA9Q8IUA7 1624 aa16.41■□□□□ 0.22
NCKIPSD-202ENST00000413374 HECW1Q76N89 1606 aa16.38■□□□□ 0.21
NCKIPSD-202ENST00000413374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.38■□□□□ 0.21
NCKIPSD-202ENST00000413374 PHLDB1Q86UU1 1377 aa16.38■□□□□ 0.21
NCKIPSD-202ENST00000413374 ARAP3Q8WWN8 1544 aa16.36■□□□□ 0.21
NCKIPSD-202ENST00000413374 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
NCKIPSD-202ENST00000413374 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
NCKIPSD-202ENST00000413374 NEO1Q92859 1461 aa16.35■□□□□ 0.21
NCKIPSD-202ENST00000413374 FANCAO15360 1455 aa16.34■□□□□ 0.21
NCKIPSD-202ENST00000413374 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.2
NCKIPSD-202ENST00000413374 TROQ12816 1431 aaPredicted RBP16.33■□□□□ 0.2
NCKIPSD-202ENST00000413374 PLCH2O75038 1416 aa16.32■□□□□ 0.2
NCKIPSD-202ENST00000413374 ADGRL1O94910 1474 aa16.32■□□□□ 0.2
NCKIPSD-202ENST00000413374 TTC37Q6PGP7 1564 aa16.32■□□□□ 0.2
NCKIPSD-202ENST00000413374 PCF11O94913 1555 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-202ENST00000413374 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-202ENST00000413374 DENND4BO75064 1496 aaPredicted RBP16.3■□□□□ 0.2
NCKIPSD-202ENST00000413374 CEP162Q5TB80 1403 aa16.3■□□□□ 0.2
NCKIPSD-202ENST00000413374 SCAPERQ9BY12 1400 aa16.28■□□□□ 0.2
NCKIPSD-202ENST00000413374 MYT1LQ9UL68 1186 aa16.26■□□□□ 0.19
NCKIPSD-202ENST00000413374 ZNF777Q9ULD5 760 aaPredicted RBP16.26■□□□□ 0.19
NCKIPSD-202ENST00000413374 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
NCKIPSD-202ENST00000413374 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
NCKIPSD-202ENST00000413374 KIF14Q15058 1648 aa16.26■□□□□ 0.19
NCKIPSD-202ENST00000413374 AFAP1Q8N556 730 aa16.25■□□□□ 0.19
NCKIPSD-202ENST00000413374 LRRIQ1Q96JM4 1722 aa16.24■□□□□ 0.19
NCKIPSD-202ENST00000413374 ARHGAP5Q13017 1502 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms