RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 EHMT2Q96KQ7 1210 aa33.71■■■□□ 2.99
C4orf48-202ENST00000409860 UBTFP17480 764 aaKnown RBP33.64■■■□□ 2.98
C4orf48-202ENST00000409860 IQGAP2Q13576 1575 aa33.6■■■□□ 2.97
C4orf48-202ENST00000409860 CTTNBP2Q8WZ74 1663 aa33.58■■■□□ 2.97
C4orf48-202ENST00000409860 JPH4Q96JJ6 628 aa33.56■■■□□ 2.96
C4orf48-202ENST00000409860 SHROOM2Q13796 1616 aa33.51■■■□□ 2.96
C4orf48-202ENST00000409860 DNAJC5Q9H3Z4 198 aa33.51■■■□□ 2.95
C4orf48-202ENST00000409860 PRG4Q92954 1404 aaPredicted RBP33.45■■■□□ 2.95
C4orf48-202ENST00000409860 TNIKQ9UKE5 1360 aa33.45■■■□□ 2.94
C4orf48-202ENST00000409860 UGGT2Q9NYU1 1516 aa33.44■■■□□ 2.94
C4orf48-202ENST00000409860 LOC105371045A0A1W2PR82 267 aa33.44■■■□□ 2.94
C4orf48-202ENST00000409860 ARHGEF11O15085 1522 aa33.4■■■□□ 2.94
C4orf48-202ENST00000409860 CARMIL2Q6F5E8 1435 aa33.38■■■□□ 2.93
C4orf48-202ENST00000409860 RANGAP1P46060 587 aaPredicted RBP33.35■■■□□ 2.93
C4orf48-202ENST00000409860 ERCC6L2Q5T890 1561 aa33.32■■■□□ 2.92
C4orf48-202ENST00000409860 DISP1Q96F81 1524 aa33.31■■■□□ 2.92
C4orf48-202ENST00000409860 RIMBP3CA6NJZ7 1639 aa33.3■■■□□ 2.92
C4orf48-202ENST00000409860 RIMBP3BA6NNM3 1639 aa33.3■■■□□ 2.92
C4orf48-202ENST00000409860 RIMBP3Q9UFD9 1639 aa33.3■■■□□ 2.92
C4orf48-202ENST00000409860 KIAA0556O60303 1618 aa33.28■■■□□ 2.92
C4orf48-202ENST00000409860 EFCAB5A4FU69 1503 aa33.24■■■□□ 2.91
C4orf48-202ENST00000409860 SAMD9Q5K651 1589 aa33.23■■■□□ 2.91
C4orf48-202ENST00000409860 P3H3Q8IVL6 736 aa33.18■■■□□ 2.9
C4orf48-202ENST00000409860 CLIP1P30622 1438 aa33.18■■■□□ 2.9
C4orf48-202ENST00000409860 ARAP1Q96P48 1450 aa33.18■■■□□ 2.9
C4orf48-202ENST00000409860 CEP162Q5TB80 1403 aa33.16■■■□□ 2.9
C4orf48-202ENST00000409860 PTPRGP23470 1445 aa33.15■■■□□ 2.9
C4orf48-202ENST00000409860 ARHGAP35Q9NRY4 1499 aa33.14■■■□□ 2.9
C4orf48-202ENST00000409860 FHOD3Q2V2M9 1422 aa33.11■■■□□ 2.89
C4orf48-202ENST00000409860 TTBK1Q5TCY1 1321 aaPredicted RBP33.11■■■□□ 2.89
C4orf48-202ENST00000409860 CYB5RLQ6IPT4 315 aa33.08■■■□□ 2.89
C4orf48-202ENST00000409860 FMN1Q68DA7 1419 aa32.95■■■□□ 2.87
C4orf48-202ENST00000409860 UACAQ9BZF9 1416 aa32.94■■■□□ 2.86
C4orf48-202ENST00000409860 PLB1Q6P1J6 1458 aa32.89■■■□□ 2.86
C4orf48-202ENST00000409860 ABCA8O94911 1581 aa32.87■■■□□ 2.85
C4orf48-202ENST00000409860 UHRF1BP1LA0JNW5 1464 aa32.86■■■□□ 2.85
C4orf48-202ENST00000409860 ABCC2Q92887 1545 aa32.85■■■□□ 2.85
C4orf48-202ENST00000409860 RAPGEF6Q8TEU7 1601 aa32.8■■■□□ 2.84
C4orf48-202ENST00000409860 ADCY10Q96PN6 1610 aa32.8■■■□□ 2.84
C4orf48-202ENST00000409860 NPM1P06748 294 aaKnown RBP eCLIP32.74■■■□□ 2.83
C4orf48-202ENST00000409860 CASKIN1Q8WXD9 1431 aa32.74■■■□□ 2.83
C4orf48-202ENST00000409860 VPS8Q8N3P4 1428 aa32.73■■■□□ 2.83
C4orf48-202ENST00000409860 ATP1B4Q9UN42 357 aaPredicted RBP32.72■■■□□ 2.83
C4orf48-202ENST00000409860 PCF11O94913 1555 aaKnown RBP32.7■■■□□ 2.83
C4orf48-202ENST00000409860 NUP153P49790 1475 aaKnown RBP32.7■■■□□ 2.83
C4orf48-202ENST00000409860 HECW1Q76N89 1606 aa32.69■■■□□ 2.82
C4orf48-202ENST00000409860 FYCO1Q9BQS8 1478 aa32.69■■■□□ 2.82
C4orf48-202ENST00000409860 KDM5BQ9UGL1 1544 aa32.68■■■□□ 2.82
C4orf48-202ENST00000409860 ARID3CA6NKF2 412 aa32.65■■■□□ 2.82
C4orf48-202ENST00000409860 ATP10BO94823 1461 aa32.61■■■□□ 2.81
C4orf48-202ENST00000409860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.59■■■□□ 2.81
C4orf48-202ENST00000409860 HNRNPUL2Q1KMD3 747 aaKnown RBP32.59■■■□□ 2.81
C4orf48-202ENST00000409860 ZCCHC11Q5TAX3 1644 aaKnown RBP32.59■■■□□ 2.81
C4orf48-202ENST00000409860 EPRSP07814 1512 aaKnown RBP32.58■■■□□ 2.81
C4orf48-202ENST00000409860 CCDC18Q5T9S5 1454 aa32.56■■■□□ 2.8
C4orf48-202ENST00000409860 CDK13Q14004 1512 aaKnown RBP32.53■■■□□ 2.8
C4orf48-202ENST00000409860 MAPKBP1O60336 1514 aa32.52■■■□□ 2.8
C4orf48-202ENST00000409860 ASXL2Q76L83 1435 aa32.49■■■□□ 2.79
C4orf48-202ENST00000409860 CDK11AQ9UQ88 783 aaPredicted RBP32.46■■■□□ 2.79
C4orf48-202ENST00000409860 PLEKHD1A6NEE1 506 aa32.43■■■□□ 2.78
C4orf48-202ENST00000409860 LRRIQ1Q96JM4 1722 aa32.43■■■□□ 2.78
C4orf48-202ENST00000409860 WDR7Q9Y4E6 1490 aa32.42■■■□□ 2.78
C4orf48-202ENST00000409860 APLP2Q06481 763 aa32.42■■■□□ 2.78
C4orf48-202ENST00000409860 MAP3K1Q13233 1512 aa32.35■■■□□ 2.77
C4orf48-202ENST00000409860 TIAM1Q13009 1591 aa32.34■■■□□ 2.77
C4orf48-202ENST00000409860 CFAP43Q8NDM7 1665 aa32.33■■■□□ 2.77
C4orf48-202ENST00000409860 TROQ12816 1431 aaPredicted RBP32.32■■■□□ 2.76
C4orf48-202ENST00000409860 ABCC10Q5T3U5 1492 aa32.3■■■□□ 2.76
C4orf48-202ENST00000409860 KCNH8Q96L42 1107 aa32.3■■■□□ 2.76
C4orf48-202ENST00000409860 MTUS2Q5JR59 1369 aa32.3■■■□□ 2.76
C4orf48-202ENST00000409860 MAGI3Q5TCQ9 1506 aa32.26■■■□□ 2.75
C4orf48-202ENST00000409860 DIP2BQ9P265 1576 aa32.24■■■□□ 2.75
C4orf48-202ENST00000409860 TRHP20396 242 aaPredicted RBP32.24■■■□□ 2.75
C4orf48-202ENST00000409860 FAM69CQ0P6D2 419 aa32.24■■■□□ 2.75
C4orf48-202ENST00000409860 EHBP1L1Q8N3D4 1523 aa32.24■■■□□ 2.75
C4orf48-202ENST00000409860 LRRC9Q6ZRR7 1453 aa32.22■■■□□ 2.75
C4orf48-202ENST00000409860 GLI2P10070 1586 aa32.19■■■□□ 2.74
C4orf48-202ENST00000409860 KIF14Q15058 1648 aa32.18■■■□□ 2.74
C4orf48-202ENST00000409860 KANK4Q5T7N3 995 aaPredicted RBP32.17■■■□□ 2.74
C4orf48-202ENST00000409860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.1■■■□□ 2.73
C4orf48-202ENST00000409860 ABCA9Q8IUA7 1624 aa32.1■■■□□ 2.73
C4orf48-202ENST00000409860 KIF13AQ9H1H9 1805 aa32.1■■■□□ 2.73
C4orf48-202ENST00000409860 CD109Q6YHK3 1445 aa32.07■■■□□ 2.72
C4orf48-202ENST00000409860 TTC37Q6PGP7 1564 aa32.06■■■□□ 2.72
C4orf48-202ENST00000409860 SUPT6HQ7KZ85 1726 aaKnown RBP32.05■■■□□ 2.72
C4orf48-202ENST00000409860 MAP3K4Q9Y6R4 1608 aa32.04■■■□□ 2.72
C4orf48-202ENST00000409860 NCOA2Q15596 1464 aa32.03■■■□□ 2.72
C4orf48-202ENST00000409860 CCNB3Q8WWL7 1395 aa32■■■□□ 2.71
C4orf48-202ENST00000409860 PLCH2O75038 1416 aa31.96■■■□□ 2.71
C4orf48-202ENST00000409860 PPARGC1BQ86YN6 1023 aaKnown RBP31.96■■■□□ 2.71
C4orf48-202ENST00000409860 TEX14Q8IWB6 1497 aa31.93■■■□□ 2.7
C4orf48-202ENST00000409860 GPATCH8Q9UKJ3 1502 aaKnown RBP31.92■■■□□ 2.7
C4orf48-202ENST00000409860 MYO5CQ9NQX4 1742 aa31.92■■■□□ 2.7
C4orf48-202ENST00000409860 ARAP3Q8WWN8 1544 aa31.91■■■□□ 2.7
C4orf48-202ENST00000409860 TSPOAP1O95153 1857 aa31.89■■■□□ 2.69
C4orf48-202ENST00000409860 ARHGAP5Q13017 1502 aa31.88■■■□□ 2.69
C4orf48-202ENST00000409860 PREX2Q70Z35 1606 aa31.87■■■□□ 2.69
C4orf48-202ENST00000409860 EFCAB2Q5VUJ9 269 aa31.86■■■□□ 2.69
C4orf48-202ENST00000409860 CFDP1Q9UEE9 299 aaPredicted RBP31.86■■■□□ 2.69
C4orf48-202ENST00000409860 PPRC1Q5VV67 1664 aaKnown RBP31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms