RNA–Protein interactions for RNA: ENST00000409683.5

PTMA-204, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene PTMA, Length 933 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-204ENST00000409683 SPDYE4A6NLX3 237 aa18.19■□□□□ 0.5
PTMA-204ENST00000409683 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
PTMA-204ENST00000409683 CUX1P39880 1505 aa18.17■□□□□ 0.5
PTMA-204ENST00000409683 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
PTMA-204ENST00000409683 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
PTMA-204ENST00000409683 PITPNM1O00562 1244 aa18.15■□□□□ 0.5
PTMA-204ENST00000409683 CHRDL2Q6WN34 429 aa18.15■□□□□ 0.5
PTMA-204ENST00000409683 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
PTMA-204ENST00000409683 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
PTMA-204ENST00000409683 BIVM-ERCC5R4GMW8 1640 aa18.13■□□□□ 0.49
PTMA-204ENST00000409683 URB2Q14146 1524 aaKnown RBP18.11■□□□□ 0.49
PTMA-204ENST00000409683 DNMBPQ6XZF7 1577 aa18.09■□□□□ 0.49
PTMA-204ENST00000409683 TOPBP1Q92547 1522 aa18.08■□□□□ 0.49
PTMA-204ENST00000409683 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
PTMA-204ENST00000409683 CLEC11AQ9Y240 323 aa18.05■□□□□ 0.48
PTMA-204ENST00000409683 WDR62O43379 1518 aa18.03■□□□□ 0.48
PTMA-204ENST00000409683 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
PTMA-204ENST00000409683 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
PTMA-204ENST00000409683 SPDYE1Q8NFV5 336 aaPredicted RBP18■□□□□ 0.47
PTMA-204ENST00000409683 POTEHQ6S545 545 aa17.98■□□□□ 0.47
PTMA-204ENST00000409683 POLA1P09884 1462 aaPredicted RBP17.98■□□□□ 0.47
PTMA-204ENST00000409683 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
PTMA-204ENST00000409683 FKBP8Q14318 412 aa17.94■□□□□ 0.46
PTMA-204ENST00000409683 CUX2O14529 1486 aa17.92■□□□□ 0.46
PTMA-204ENST00000409683 SOGA1O94964 1423 aa17.9■□□□□ 0.46
PTMA-204ENST00000409683 ABCA10Q8WWZ4 1543 aa17.9■□□□□ 0.46
PTMA-204ENST00000409683 PIP4P2Q8N4L2 257 aa17.88■□□□□ 0.45
PTMA-204ENST00000409683 EEA1Q15075 1411 aa17.88■□□□□ 0.45
PTMA-204ENST00000409683 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
PTMA-204ENST00000409683 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
PTMA-204ENST00000409683 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
PTMA-204ENST00000409683 IFT140Q96RY7 1462 aa17.83■□□□□ 0.45
PTMA-204ENST00000409683 WDR97A6NE52 1622 aa17.82■□□□□ 0.44
PTMA-204ENST00000409683 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
PTMA-204ENST00000409683 FXR2P51116 673 aaKnown RBP eCLIP17.81■□□□□ 0.442e-10■■□□□ 13.9
PTMA-204ENST00000409683 PRR29P0C7W0 189 aa17.77■□□□□ 0.44
PTMA-204ENST00000409683 PROM2Q8N271 834 aa17.77■□□□□ 0.44
PTMA-204ENST00000409683 IGF1RP08069 1367 aa17.77■□□□□ 0.43
PTMA-204ENST00000409683 ABCA5Q8WWZ7 1642 aa17.74■□□□□ 0.43
PTMA-204ENST00000409683 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
PTMA-204ENST00000409683 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
PTMA-204ENST00000409683 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
PTMA-204ENST00000409683 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
PTMA-204ENST00000409683 PRKAR2AP13861 404 aaKnown RBP17.68■□□□□ 0.42
PTMA-204ENST00000409683 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
PTMA-204ENST00000409683 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
PTMA-204ENST00000409683 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
PTMA-204ENST00000409683 STAG3Q9UJ98 1225 aa17.67■□□□□ 0.42
PTMA-204ENST00000409683 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.424e-20■■■■■ 37.2
PTMA-204ENST00000409683 KIF21BO75037 1637 aa17.62■□□□□ 0.41
PTMA-204ENST00000409683 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
PTMA-204ENST00000409683 CARMIL1Q5VZK9 1371 aa17.6■□□□□ 0.41
PTMA-204ENST00000409683 EIF4G3O43432 1585 aaKnown RBP17.59■□□□□ 0.41
PTMA-204ENST00000409683 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
PTMA-204ENST00000409683 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
PTMA-204ENST00000409683 CUL7Q14999 1698 aa17.55■□□□□ 0.4
PTMA-204ENST00000409683 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
PTMA-204ENST00000409683 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
PTMA-204ENST00000409683 GOLGA3Q08378 1498 aa17.53■□□□□ 0.4
PTMA-204ENST00000409683 MAGI1Q96QZ7 1491 aaPredicted RBP17.52■□□□□ 0.4
PTMA-204ENST00000409683 TNIKQ9UKE5 1360 aa17.5■□□□□ 0.39
PTMA-204ENST00000409683 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
PTMA-204ENST00000409683 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
PTMA-204ENST00000409683 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
PTMA-204ENST00000409683 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
PTMA-204ENST00000409683 HAX1O00165 279 aa17.4■□□□□ 0.38
PTMA-204ENST00000409683 GRIN2AQ12879 1464 aa17.39■□□□□ 0.37
PTMA-204ENST00000409683 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
PTMA-204ENST00000409683 FARP1Q9Y4F1 1045 aaPredicted RBP17.38■□□□□ 0.37
PTMA-204ENST00000409683 NUP160Q12769 1436 aa17.36■□□□□ 0.37
PTMA-204ENST00000409683 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
PTMA-204ENST00000409683 MIER1Q8N108 512 aa17.31■□□□□ 0.36
PTMA-204ENST00000409683 KIAA0586Q9BVV6 1533 aa17.31■□□□□ 0.36
PTMA-204ENST00000409683 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
PTMA-204ENST00000409683 EVX2Q03828 476 aa17.28■□□□□ 0.36
PTMA-204ENST00000409683 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
PTMA-204ENST00000409683 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
PTMA-204ENST00000409683 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
PTMA-204ENST00000409683 MNX1P50219 401 aaPredicted RBP17.25■□□□□ 0.35
PTMA-204ENST00000409683 PLCD3Q8N3E9 789 aa17.24■□□□□ 0.35
PTMA-204ENST00000409683 CHD1O14646 1710 aa17.24■□□□□ 0.35
PTMA-204ENST00000409683 CLIP1P30622 1438 aa17.23■□□□□ 0.35
PTMA-204ENST00000409683 C19orf67A6NJJ6 358 aa17.23■□□□□ 0.35
PTMA-204ENST00000409683 UGGT2Q9NYU1 1516 aa17.22■□□□□ 0.35
PTMA-204ENST00000409683 IQGAP2Q13576 1575 aa17.21■□□□□ 0.35
PTMA-204ENST00000409683 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
PTMA-204ENST00000409683 EFCAB5A4FU69 1503 aa17.17■□□□□ 0.34
PTMA-204ENST00000409683 CLASP1Q7Z460 1538 aa17.17■□□□□ 0.34
PTMA-204ENST00000409683 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
PTMA-204ENST00000409683 JPH4Q96JJ6 628 aa17.16■□□□□ 0.34
PTMA-204ENST00000409683 PLEKHG5O94827 1062 aa17.15■□□□□ 0.34
PTMA-204ENST00000409683 CD44P16070 742 aaKnown RBP17.15■□□□□ 0.34
PTMA-204ENST00000409683 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
PTMA-204ENST00000409683 DISP1Q96F81 1524 aa17.14■□□□□ 0.33
PTMA-204ENST00000409683 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
PTMA-204ENST00000409683 NPM1P06748 294 aaKnown RBP eCLIP17.12■□□□□ 0.333e-14■□□□□ 9
PTMA-204ENST00000409683 VASPP50552 380 aaPredicted RBP17.12■□□□□ 0.33
PTMA-204ENST00000409683 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
PTMA-204ENST00000409683 VPS8Q8N3P4 1428 aa17.07■□□□□ 0.32
PTMA-204ENST00000409683 KIAA0556O60303 1618 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms