RNA–Protein interactions for RNA: ENST00000409529.6

CCDC138-202, Transcript of coiled-coil domain containing 138, humanhuman

TSL 2

Gene CCDC138, Length 2,364 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-202ENST00000409529 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
CCDC138-202ENST00000409529 PCF11O94913 1555 aaKnown RBP19.42■□□□□ 0.7
CCDC138-202ENST00000409529 LRRC9Q6ZRR7 1453 aa19.42■□□□□ 0.7
CCDC138-202ENST00000409529 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
CCDC138-202ENST00000409529 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
CCDC138-202ENST00000409529 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
CCDC138-202ENST00000409529 CUL7Q14999 1698 aa19.4■□□□□ 0.7
CCDC138-202ENST00000409529 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
CCDC138-202ENST00000409529 PHLDB1Q86UU1 1377 aa19.39■□□□□ 0.69
CCDC138-202ENST00000409529 MAP3K1Q13233 1512 aa19.38■□□□□ 0.69
CCDC138-202ENST00000409529 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
CCDC138-202ENST00000409529 FAM50AQ14320 339 aaKnown RBP19.35■□□□□ 0.69
CCDC138-202ENST00000409529 CTTNBP2Q8WZ74 1663 aa19.35■□□□□ 0.69
CCDC138-202ENST00000409529 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
CCDC138-202ENST00000409529 NEUROD1Q13562 356 aa19.33■□□□□ 0.68
CCDC138-202ENST00000409529 CLSPNQ9HAW4 1339 aa19.32■□□□□ 0.68
CCDC138-202ENST00000409529 EFCAB5A4FU69 1503 aa19.31■□□□□ 0.68
CCDC138-202ENST00000409529 CFAP43Q8NDM7 1665 aa19.31■□□□□ 0.68
CCDC138-202ENST00000409529 RAB3GAP2Q9H2M9 1393 aa19.3■□□□□ 0.68
CCDC138-202ENST00000409529 CASKIN1Q8WXD9 1431 aa19.29■□□□□ 0.68
CCDC138-202ENST00000409529 FYCO1Q9BQS8 1478 aa19.28■□□□□ 0.68
CCDC138-202ENST00000409529 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
CCDC138-202ENST00000409529 MIER1Q8N108 512 aa19.27■□□□□ 0.68
CCDC138-202ENST00000409529 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
CCDC138-202ENST00000409529 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.67
CCDC138-202ENST00000409529 FMN1Q68DA7 1419 aa19.23■□□□□ 0.67
CCDC138-202ENST00000409529 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
CCDC138-202ENST00000409529 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
CCDC138-202ENST00000409529 SETD5Q9C0A6 1442 aa19.21■□□□□ 0.67
CCDC138-202ENST00000409529 SAMD9Q5K651 1589 aa19.18■□□□□ 0.66
CCDC138-202ENST00000409529 CENPBP07199 599 aaPredicted RBP19.18■□□□□ 0.66
CCDC138-202ENST00000409529 MAPKBP1O60336 1514 aa19.17■□□□□ 0.66
CCDC138-202ENST00000409529 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
CCDC138-202ENST00000409529 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
CCDC138-202ENST00000409529 MRC2Q9UBG0 1479 aa19.15■□□□□ 0.66
CCDC138-202ENST00000409529 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
CCDC138-202ENST00000409529 SIN3AQ96ST3 1273 aa19.12■□□□□ 0.65
CCDC138-202ENST00000409529 GRIN2BQ13224 1484 aa19.11■□□□□ 0.65
CCDC138-202ENST00000409529 FGD6Q6ZV73 1430 aa19.1■□□□□ 0.65
CCDC138-202ENST00000409529 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
CCDC138-202ENST00000409529 ARID3CA6NKF2 412 aa19.1■□□□□ 0.65
CCDC138-202ENST00000409529 GTF3C3Q9Y5Q9 886 aa19.09■□□□□ 0.65
CCDC138-202ENST00000409529 ADAMTS12P58397 1594 aa19.06■□□□□ 0.64
CCDC138-202ENST00000409529 NCOA2Q15596 1464 aa19.06■□□□□ 0.64
CCDC138-202ENST00000409529 PTPRKQ15262 1439 aa19.05■□□□□ 0.64
CCDC138-202ENST00000409529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.04■□□□□ 0.64
CCDC138-202ENST00000409529 IQGAP2Q13576 1575 aa19.03■□□□□ 0.64
CCDC138-202ENST00000409529 MAGI3Q5TCQ9 1506 aa19.03■□□□□ 0.64
CCDC138-202ENST00000409529 MYOM3Q5VTT5 1437 aa19■□□□□ 0.63
CCDC138-202ENST00000409529 IFT140Q96RY7 1462 aa18.99■□□□□ 0.63
CCDC138-202ENST00000409529 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
CCDC138-202ENST00000409529 WDR62O43379 1518 aa18.98■□□□□ 0.63
CCDC138-202ENST00000409529 THOC2Q8NI27 1593 aaKnown RBP18.97■□□□□ 0.63
CCDC138-202ENST00000409529 EHBP1L1Q8N3D4 1523 aa18.97■□□□□ 0.63
CCDC138-202ENST00000409529 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
CCDC138-202ENST00000409529 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
CCDC138-202ENST00000409529 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
CCDC138-202ENST00000409529 CCDC18Q5T9S5 1454 aa18.94■□□□□ 0.62
CCDC138-202ENST00000409529 EPRSP07814 1512 aaKnown RBP18.94■□□□□ 0.62
CCDC138-202ENST00000409529 UGGT2Q9NYU1 1516 aa18.94■□□□□ 0.62
CCDC138-202ENST00000409529 HECW1Q76N89 1606 aa18.93■□□□□ 0.62
CCDC138-202ENST00000409529 HFM1A2PYH4 1435 aa18.92■□□□□ 0.62
CCDC138-202ENST00000409529 RRP7BPQ9NSQ0 103 aa18.91■□□□□ 0.62
CCDC138-202ENST00000409529 PTPN23Q9H3S7 1636 aa18.91■□□□□ 0.62
CCDC138-202ENST00000409529 NAIPQ13075 1403 aa18.9■□□□□ 0.62
CCDC138-202ENST00000409529 ARHGEF11O15085 1522 aa18.9■□□□□ 0.62
CCDC138-202ENST00000409529 EIF4G3O43432 1585 aaKnown RBP18.9■□□□□ 0.62
CCDC138-202ENST00000409529 HIRIP3Q9BW71 556 aaPredicted RBP18.89■□□□□ 0.61
CCDC138-202ENST00000409529 FBLN2P98095 1184 aa18.88■□□□□ 0.61
CCDC138-202ENST00000409529 KIAA0586Q9BVV6 1533 aa18.87■□□□□ 0.61
CCDC138-202ENST00000409529 DISP1Q96F81 1524 aa18.86■□□□□ 0.61
CCDC138-202ENST00000409529 GRIN2AQ12879 1464 aa18.86■□□□□ 0.61
CCDC138-202ENST00000409529 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
CCDC138-202ENST00000409529 UACAQ9BZF9 1416 aa18.85■□□□□ 0.61
CCDC138-202ENST00000409529 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
CCDC138-202ENST00000409529 KIAA0556O60303 1618 aa18.83■□□□□ 0.61
CCDC138-202ENST00000409529 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
CCDC138-202ENST00000409529 DDX10Q13206 875 aaKnown RBP18.81■□□□□ 0.6
CCDC138-202ENST00000409529 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
CCDC138-202ENST00000409529 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
CCDC138-202ENST00000409529 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
CCDC138-202ENST00000409529 NUP153P49790 1475 aaKnown RBP18.79■□□□□ 0.6
CCDC138-202ENST00000409529 TRIM52Q96A61 297 aa18.78■□□□□ 0.6
CCDC138-202ENST00000409529 ZNF644Q9H582 1327 aaPredicted RBP18.77■□□□□ 0.6
CCDC138-202ENST00000409529 KDM6BO15054 1643 aa18.77■□□□□ 0.59
CCDC138-202ENST00000409529 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
CCDC138-202ENST00000409529 MAGI1Q96QZ7 1491 aaPredicted RBP18.74■□□□□ 0.59
CCDC138-202ENST00000409529 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
CCDC138-202ENST00000409529 RAPGEF6Q8TEU7 1601 aa18.74■□□□□ 0.59
CCDC138-202ENST00000409529 SYNJ2O15056 1496 aa18.73■□□□□ 0.59
CCDC138-202ENST00000409529 PLB1Q6P1J6 1458 aa18.72■□□□□ 0.59
CCDC138-202ENST00000409529 FOXD1Q16676 465 aa18.71■□□□□ 0.59
CCDC138-202ENST00000409529 PRG4Q92954 1404 aaPredicted RBP18.71■□□□□ 0.59
CCDC138-202ENST00000409529 DENND4BO75064 1496 aaPredicted RBP18.71■□□□□ 0.59
CCDC138-202ENST00000409529 JPH4Q96JJ6 628 aa18.7■□□□□ 0.58
CCDC138-202ENST00000409529 GCC2Q8IWJ2 1684 aa18.69■□□□□ 0.58
CCDC138-202ENST00000409529 CDK11AQ9UQ88 783 aaPredicted RBP18.69■□□□□ 0.58
CCDC138-202ENST00000409529 MPHOSPH9Q99550 1183 aa18.67■□□□□ 0.58
CCDC138-202ENST00000409529 DAPK1P53355 1430 aa18.67■□□□□ 0.58
CCDC138-202ENST00000409529 ABCC5O15440 1437 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms