RNA–Protein interactions for RNA: ENST00000409529.6

CCDC138-202, Transcript of coiled-coil domain containing 138, humanhuman

TSL 2

Gene CCDC138, Length 2,364 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-202ENST00000409529 NISCHQ9Y2I1 1504 aa27.83■■■□□ 2.05
CCDC138-202ENST00000409529 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.38
CCDC138-202ENST00000409529 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
CCDC138-202ENST00000409529 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
CCDC138-202ENST00000409529 DCAF8L2P0C7V8 631 aa23.29■■□□□ 1.32
CCDC138-202ENST00000409529 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
CCDC138-202ENST00000409529 DCAF1Q9Y4B6 1507 aa22.76■■□□□ 1.23
CCDC138-202ENST00000409529 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
CCDC138-202ENST00000409529 ABCC9O60706 1549 aa22.28■■□□□ 1.16
CCDC138-202ENST00000409529 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
CCDC138-202ENST00000409529 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
CCDC138-202ENST00000409529 NACADO15069 1562 aa21.99■■□□□ 1.11
CCDC138-202ENST00000409529 RSF1Q96T23 1441 aaPredicted RBP21.96■■□□□ 1.11
CCDC138-202ENST00000409529 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
CCDC138-202ENST00000409529 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.07
CCDC138-202ENST00000409529 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
CCDC138-202ENST00000409529 MROH2BQ7Z745 1585 aa21.66■■□□□ 1.06
CCDC138-202ENST00000409529 WIZO95785 1651 aa21.54■■□□□ 1.04
CCDC138-202ENST00000409529 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
CCDC138-202ENST00000409529 PCGF6Q9BYE7 350 aa21.43■■□□□ 1.02
CCDC138-202ENST00000409529 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
CCDC138-202ENST00000409529 FAM9AQ8IZU1 332 aaPredicted RBP21.39■■□□□ 1.02
CCDC138-202ENST00000409529 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
CCDC138-202ENST00000409529 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
CCDC138-202ENST00000409529 EHMT2Q96KQ7 1210 aa21.27■■□□□ 1
CCDC138-202ENST00000409529 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
CCDC138-202ENST00000409529 HRCP23327 699 aa21.19■□□□□ 0.98
CCDC138-202ENST00000409529 BICRAQ9NZM4 1560 aa21.15■□□□□ 0.98
CCDC138-202ENST00000409529 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
CCDC138-202ENST00000409529 CCDC88BA6NC98 1476 aa21.1■□□□□ 0.97
CCDC138-202ENST00000409529 EIF4G1Q04637 1599 aaKnown RBP21.09■□□□□ 0.97
CCDC138-202ENST00000409529 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
CCDC138-202ENST00000409529 TRIM26Q12899 539 aaPredicted RBP21■□□□□ 0.95
CCDC138-202ENST00000409529 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
CCDC138-202ENST00000409529 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
CCDC138-202ENST00000409529 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
CCDC138-202ENST00000409529 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.91
CCDC138-202ENST00000409529 SOGA1O94964 1423 aa20.76■□□□□ 0.91
CCDC138-202ENST00000409529 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
CCDC138-202ENST00000409529 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
CCDC138-202ENST00000409529 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
CCDC138-202ENST00000409529 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
CCDC138-202ENST00000409529 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
CCDC138-202ENST00000409529 UBTFP17480 764 aaKnown RBP20.53■□□□□ 0.88
CCDC138-202ENST00000409529 CEP162Q5TB80 1403 aa20.52■□□□□ 0.87
CCDC138-202ENST00000409529 TTBK1Q5TCY1 1321 aaPredicted RBP20.5■□□□□ 0.87
CCDC138-202ENST00000409529 EEA1Q15075 1411 aa20.5■□□□□ 0.87
CCDC138-202ENST00000409529 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
CCDC138-202ENST00000409529 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
CCDC138-202ENST00000409529 NCAPD3P42695 1498 aa20.38■□□□□ 0.85
CCDC138-202ENST00000409529 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
CCDC138-202ENST00000409529 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
CCDC138-202ENST00000409529 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
CCDC138-202ENST00000409529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
CCDC138-202ENST00000409529 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
CCDC138-202ENST00000409529 RANGAP1P46060 587 aaPredicted RBP20.27■□□□□ 0.84
CCDC138-202ENST00000409529 KIF21BO75037 1637 aa20.25■□□□□ 0.83
CCDC138-202ENST00000409529 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
CCDC138-202ENST00000409529 BIVM-ERCC5R4GMW8 1640 aa20.19■□□□□ 0.82
CCDC138-202ENST00000409529 CLIP1P30622 1438 aa20.18■□□□□ 0.82
CCDC138-202ENST00000409529 CCER1Q8TC90 406 aaPredicted RBP20.18■□□□□ 0.82
CCDC138-202ENST00000409529 CUX1P39880 1505 aa20.17■□□□□ 0.82
CCDC138-202ENST00000409529 CFTRP13569 1480 aa20.16■□□□□ 0.82
CCDC138-202ENST00000409529 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
CCDC138-202ENST00000409529 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
CCDC138-202ENST00000409529 CC2D2AQ9P2K1 1620 aa20.02■□□□□ 0.8
CCDC138-202ENST00000409529 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
CCDC138-202ENST00000409529 KIF27Q86VH2 1401 aa20■□□□□ 0.79
CCDC138-202ENST00000409529 APLP2Q06481 763 aa19.98■□□□□ 0.79
CCDC138-202ENST00000409529 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
CCDC138-202ENST00000409529 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
CCDC138-202ENST00000409529 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
CCDC138-202ENST00000409529 CUX2O14529 1486 aa19.89■□□□□ 0.77
CCDC138-202ENST00000409529 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
CCDC138-202ENST00000409529 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
CCDC138-202ENST00000409529 IGF1RP08069 1367 aa19.83■□□□□ 0.77
CCDC138-202ENST00000409529 KANK4Q5T7N3 995 aaPredicted RBP19.82■□□□□ 0.76
CCDC138-202ENST00000409529 FANCD2Q9BXW9 1451 aa19.81■□□□□ 0.76
CCDC138-202ENST00000409529 NESP48681 1621 aa19.8■□□□□ 0.76
CCDC138-202ENST00000409529 ARHGAP35Q9NRY4 1499 aa19.76■□□□□ 0.75
CCDC138-202ENST00000409529 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
CCDC138-202ENST00000409529 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
CCDC138-202ENST00000409529 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
CCDC138-202ENST00000409529 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
CCDC138-202ENST00000409529 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.74
CCDC138-202ENST00000409529 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.73
CCDC138-202ENST00000409529 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
CCDC138-202ENST00000409529 P3H3Q8IVL6 736 aa19.63■□□□□ 0.73
CCDC138-202ENST00000409529 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
CCDC138-202ENST00000409529 ITGAEP38570 1179 aa19.55■□□□□ 0.72
CCDC138-202ENST00000409529 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
CCDC138-202ENST00000409529 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
CCDC138-202ENST00000409529 RRBP1Q9P2E9 1410 aaKnown RBP19.53■□□□□ 0.72
CCDC138-202ENST00000409529 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
CCDC138-202ENST00000409529 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.72
CCDC138-202ENST00000409529 TDRD9Q8NDG6 1382 aaKnown RBP19.5■□□□□ 0.71
CCDC138-202ENST00000409529 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
CCDC138-202ENST00000409529 TIAM1Q13009 1591 aa19.47■□□□□ 0.71
CCDC138-202ENST00000409529 FHOD3Q2V2M9 1422 aa19.47■□□□□ 0.71
CCDC138-202ENST00000409529 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms