RNA–Protein interactions for RNA: ENST00000407086.7

BCAS3-202, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BCAS3, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-202ENST00000407086 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
BCAS3-202ENST00000407086 CUX1P39880 1505 aa16.22■□□□□ 0.19
BCAS3-202ENST00000407086 TOPBP1Q92547 1522 aa16.21■□□□□ 0.19
BCAS3-202ENST00000407086 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
BCAS3-202ENST00000407086 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
BCAS3-202ENST00000407086 ATP1B4Q9UN42 357 aaPredicted RBP16.17■□□□□ 0.18
BCAS3-202ENST00000407086 FGD5Q6ZNL6 1462 aa16.17■□□□□ 0.18
BCAS3-202ENST00000407086 FBLN2P98095 1184 aa16.15■□□□□ 0.18
BCAS3-202ENST00000407086 EIF5BO60841 1220 aaKnown RBP16.14■□□□□ 0.17
BCAS3-202ENST00000407086 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.17
BCAS3-202ENST00000407086 POLA1P09884 1462 aaPredicted RBP16.13■□□□□ 0.17
BCAS3-202ENST00000407086 TNIKQ9UKE5 1360 aa16.12■□□□□ 0.17
BCAS3-202ENST00000407086 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
BCAS3-202ENST00000407086 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.17
BCAS3-202ENST00000407086 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
BCAS3-202ENST00000407086 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
BCAS3-202ENST00000407086 CUX2O14529 1486 aa16.09■□□□□ 0.17
BCAS3-202ENST00000407086 PRDM2Q13029 1718 aa16.08■□□□□ 0.16
BCAS3-202ENST00000407086 WDR62O43379 1518 aa16.07■□□□□ 0.16
BCAS3-202ENST00000407086 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
BCAS3-202ENST00000407086 CLIP1P30622 1438 aa16.05■□□□□ 0.16
BCAS3-202ENST00000407086 IL27Q8NEV9 243 aa16.04■□□□□ 0.16
BCAS3-202ENST00000407086 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
BCAS3-202ENST00000407086 TOP2BQ02880 1626 aa16.02■□□□□ 0.16
BCAS3-202ENST00000407086 GOLGA3Q08378 1498 aa16.01■□□□□ 0.15
BCAS3-202ENST00000407086 HIRIP3Q9BW71 556 aaPredicted RBP15.99■□□□□ 0.15
BCAS3-202ENST00000407086 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
BCAS3-202ENST00000407086 P3H3Q8IVL6 736 aa15.96■□□□□ 0.15
BCAS3-202ENST00000407086 IFT140Q96RY7 1462 aa15.95■□□□□ 0.14
BCAS3-202ENST00000407086 KANK4Q5T7N3 995 aaPredicted RBP15.93■□□□□ 0.14
BCAS3-202ENST00000407086 CHMP7Q8WUX9 453 aaPredicted RBP15.93■□□□□ 0.14
BCAS3-202ENST00000407086 FANCIQ9NVI1 1328 aa15.93■□□□□ 0.14
BCAS3-202ENST00000407086 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
BCAS3-202ENST00000407086 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
BCAS3-202ENST00000407086 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
BCAS3-202ENST00000407086 EEA1Q15075 1411 aa15.9■□□□□ 0.14
BCAS3-202ENST00000407086 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
BCAS3-202ENST00000407086 PAK3O75914 559 aaPredicted RBP15.89■□□□□ 0.13
BCAS3-202ENST00000407086 NOP58Q9Y2X3 529 aaKnown RBP15.88■□□□□ 0.13
BCAS3-202ENST00000407086 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
BCAS3-202ENST00000407086 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
BCAS3-202ENST00000407086 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
BCAS3-202ENST00000407086 IGF1RP08069 1367 aa15.87■□□□□ 0.13
BCAS3-202ENST00000407086 B4GALNT3Q6L9W6 998 aa15.83■□□□□ 0.12
BCAS3-202ENST00000407086 UBE2Q2Q8WVN8 375 aa15.83■□□□□ 0.12
BCAS3-202ENST00000407086 HNRNPUQ00839 825 aaKnown RBP eCLIP15.82■□□□□ 0.12
BCAS3-202ENST00000407086 SNAPC4Q5SXM2 1469 aa15.82■□□□□ 0.12
BCAS3-202ENST00000407086 EIF4G3O43432 1585 aaKnown RBP15.82■□□□□ 0.12
BCAS3-202ENST00000407086 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
BCAS3-202ENST00000407086 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
BCAS3-202ENST00000407086 ANP32CO43423 234 aa15.8■□□□□ 0.12
BCAS3-202ENST00000407086 ERICH6BQ5W0A0 696 aa15.8■□□□□ 0.12
BCAS3-202ENST00000407086 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
BCAS3-202ENST00000407086 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
BCAS3-202ENST00000407086 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
BCAS3-202ENST00000407086 ZBTB47Q9UFB7 747 aaPredicted RBP15.75■□□□□ 0.11
BCAS3-202ENST00000407086 LAS1LQ9Y4W2 734 aaKnown RBP15.74■□□□□ 0.11
BCAS3-202ENST00000407086 ANP32AP39687 249 aaKnown RBP15.73■□□□□ 0.11
BCAS3-202ENST00000407086 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
BCAS3-202ENST00000407086 CNGB1Q14028 1251 aaPredicted RBP15.7■□□□□ 0.1
BCAS3-202ENST00000407086 ABCA5Q8WWZ7 1642 aa15.7■□□□□ 0.1
BCAS3-202ENST00000407086 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
BCAS3-202ENST00000407086 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
BCAS3-202ENST00000407086 PKNOX2Q96KN3 472 aa15.67■□□□□ 0.1
BCAS3-202ENST00000407086 FHAD1B1AJZ9 1412 aa15.67■□□□□ 0.1
BCAS3-202ENST00000407086 SENP3-EIF4A1A0A087X0R7 540 aa15.65■□□□□ 0.1
BCAS3-202ENST00000407086 ARID3CA6NKF2 412 aa15.65■□□□□ 0.1
BCAS3-202ENST00000407086 NEFMP07197 916 aa15.65■□□□□ 0.1
BCAS3-202ENST00000407086 PPP4R2Q9NY27 417 aa15.64■□□□□ 0.09
BCAS3-202ENST00000407086 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
BCAS3-202ENST00000407086 BRPF3Q9ULD4 1205 aa15.63■□□□□ 0.09
BCAS3-202ENST00000407086 SYNJ2O15056 1496 aa15.63■□□□□ 0.09
BCAS3-202ENST00000407086 PBRM1Q86U86 1689 aa15.63■□□□□ 0.09
BCAS3-202ENST00000407086 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
BCAS3-202ENST00000407086 KIF21BO75037 1637 aa15.62■□□□□ 0.09
BCAS3-202ENST00000407086 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
BCAS3-202ENST00000407086 PRXQ9BXM0 1461 aa15.61■□□□□ 0.09
BCAS3-202ENST00000407086 GRIN2AQ12879 1464 aa15.61■□□□□ 0.09
BCAS3-202ENST00000407086 JPH4Q96JJ6 628 aa15.6■□□□□ 0.09
BCAS3-202ENST00000407086 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
BCAS3-202ENST00000407086 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
BCAS3-202ENST00000407086 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
BCAS3-202ENST00000407086 IPO9Q96P70 1041 aaKnown RBP15.56■□□□□ 0.08
BCAS3-202ENST00000407086 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
BCAS3-202ENST00000407086 CHD1O14646 1710 aa15.54■□□□□ 0.08
BCAS3-202ENST00000407086 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
BCAS3-202ENST00000407086 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
BCAS3-202ENST00000407086 RAB3GAP2Q9H2M9 1393 aa15.51■□□□□ 0.07
BCAS3-202ENST00000407086 VSIG10Q8N0Z9 540 aa15.51■□□□□ 0.07
BCAS3-202ENST00000407086 CEP170Q5SW79 1584 aa15.5■□□□□ 0.07
BCAS3-202ENST00000407086 CHIC2Q9UKJ5 165 aa15.49■□□□□ 0.07
BCAS3-202ENST00000407086 CCER2I3L3R5 266 aa15.48■□□□□ 0.07
BCAS3-202ENST00000407086 CUL7Q14999 1698 aa15.48■□□□□ 0.07
BCAS3-202ENST00000407086 PPP1R15AO75807 674 aaPredicted RBP15.46■□□□□ 0.07
BCAS3-202ENST00000407086 PRG4Q92954 1404 aaPredicted RBP15.46■□□□□ 0.06
BCAS3-202ENST00000407086 NUP160Q12769 1436 aa15.45■□□□□ 0.06
BCAS3-202ENST00000407086 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
BCAS3-202ENST00000407086 POLR3GLQ9BT43 218 aa15.42■□□□□ 0.06
BCAS3-202ENST00000407086 KIAA0586Q9BVV6 1533 aa15.42■□□□□ 0.06
BCAS3-202ENST00000407086 ARXQ96QS3 562 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms