RNA–Protein interactions for RNA: ENST00000407086.7

BCAS3-202, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BCAS3, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-202ENST00000407086 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
BCAS3-202ENST00000407086 CCDC180Q9P1Z9 1646 aa19.38■□□□□ 0.69
BCAS3-202ENST00000407086 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
BCAS3-202ENST00000407086 ABCC9O60706 1549 aa19.34■□□□□ 0.69
BCAS3-202ENST00000407086 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
BCAS3-202ENST00000407086 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
BCAS3-202ENST00000407086 HRCP23327 699 aa19.2■□□□□ 0.66
BCAS3-202ENST00000407086 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
BCAS3-202ENST00000407086 SUPT5HO00267 1087 aaKnown RBP19.05■□□□□ 0.64
BCAS3-202ENST00000407086 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
BCAS3-202ENST00000407086 ZCCHC6Q5VYS8 1495 aaKnown RBP18.62■□□□□ 0.57
BCAS3-202ENST00000407086 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
BCAS3-202ENST00000407086 MYT1Q01538 1121 aa18.43■□□□□ 0.54
BCAS3-202ENST00000407086 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
BCAS3-202ENST00000407086 RB1CC1Q8TDY2 1594 aa18.31■□□□□ 0.52
BCAS3-202ENST00000407086 NACADO15069 1562 aa18.3■□□□□ 0.52
BCAS3-202ENST00000407086 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
BCAS3-202ENST00000407086 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
BCAS3-202ENST00000407086 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
BCAS3-202ENST00000407086 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
BCAS3-202ENST00000407086 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.48
BCAS3-202ENST00000407086 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
BCAS3-202ENST00000407086 LOC105371045A0A1W2PR82 267 aa17.99■□□□□ 0.47
BCAS3-202ENST00000407086 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
BCAS3-202ENST00000407086 ACIN1Q9UKV3 1341 aaKnown RBP17.92■□□□□ 0.46
BCAS3-202ENST00000407086 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
BCAS3-202ENST00000407086 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
BCAS3-202ENST00000407086 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
BCAS3-202ENST00000407086 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
BCAS3-202ENST00000407086 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
BCAS3-202ENST00000407086 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.44
BCAS3-202ENST00000407086 YTHDC1Q96MU7 727 aaKnown RBP17.73■□□□□ 0.43
BCAS3-202ENST00000407086 CECR2Q9BXF3 1484 aa17.62■□□□□ 0.41
BCAS3-202ENST00000407086 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
BCAS3-202ENST00000407086 BCL11AQ9H165 835 aa17.54■□□□□ 0.4
BCAS3-202ENST00000407086 DIEXFQ68CQ4 756 aaKnown RBP17.51■□□□□ 0.39
BCAS3-202ENST00000407086 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
BCAS3-202ENST00000407086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
BCAS3-202ENST00000407086 CCER1Q8TC90 406 aaPredicted RBP17.45■□□□□ 0.38
BCAS3-202ENST00000407086 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
BCAS3-202ENST00000407086 MROH2BQ7Z745 1585 aa17.37■□□□□ 0.37
BCAS3-202ENST00000407086 EIF4G1Q04637 1599 aaKnown RBP17.36■□□□□ 0.37
BCAS3-202ENST00000407086 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
BCAS3-202ENST00000407086 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
BCAS3-202ENST00000407086 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
BCAS3-202ENST00000407086 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
BCAS3-202ENST00000407086 WIZO95785 1651 aa17.17■□□□□ 0.34
BCAS3-202ENST00000407086 ATAD2BQ9ULI0 1458 aa17.16■□□□□ 0.34
BCAS3-202ENST00000407086 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
BCAS3-202ENST00000407086 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
BCAS3-202ENST00000407086 PRKCSHP14314 528 aaPredicted RBP17.11■□□□□ 0.33
BCAS3-202ENST00000407086 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
BCAS3-202ENST00000407086 MIER1Q8N108 512 aa17.01■□□□□ 0.31
BCAS3-202ENST00000407086 SMARCA2P51531 1590 aa17■□□□□ 0.31
BCAS3-202ENST00000407086 NCAPD3P42695 1498 aa17■□□□□ 0.31
BCAS3-202ENST00000407086 BCANQ96GW7 911 aa16.94■□□□□ 0.3
BCAS3-202ENST00000407086 ZNF316A6NFI3 1004 aaPredicted RBP16.93■□□□□ 0.3
BCAS3-202ENST00000407086 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
BCAS3-202ENST00000407086 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
BCAS3-202ENST00000407086 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
BCAS3-202ENST00000407086 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
BCAS3-202ENST00000407086 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
BCAS3-202ENST00000407086 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.29
BCAS3-202ENST00000407086 HMGXB3Q12766 1538 aa16.81■□□□□ 0.28
BCAS3-202ENST00000407086 NESP48681 1621 aa16.81■□□□□ 0.28
BCAS3-202ENST00000407086 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
BCAS3-202ENST00000407086 ERICH6Q7L0X2 663 aa16.68■□□□□ 0.26
BCAS3-202ENST00000407086 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
BCAS3-202ENST00000407086 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
BCAS3-202ENST00000407086 ITGAEP38570 1179 aa16.58■□□□□ 0.24
BCAS3-202ENST00000407086 ERCC6Q03468 1493 aa16.58■□□□□ 0.24
BCAS3-202ENST00000407086 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
BCAS3-202ENST00000407086 FKBP8Q14318 412 aa16.55■□□□□ 0.24
BCAS3-202ENST00000407086 CFTRP13569 1480 aa16.53■□□□□ 0.24
BCAS3-202ENST00000407086 RBM19Q9Y4C8 960 aaKnown RBP16.52■□□□□ 0.23
BCAS3-202ENST00000407086 FANCD2Q9BXW9 1451 aa16.49■□□□□ 0.23
BCAS3-202ENST00000407086 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
BCAS3-202ENST00000407086 APLP2Q06481 763 aa16.46■□□□□ 0.23
BCAS3-202ENST00000407086 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
BCAS3-202ENST00000407086 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
BCAS3-202ENST00000407086 NEFLP07196 543 aa16.42■□□□□ 0.22
BCAS3-202ENST00000407086 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
BCAS3-202ENST00000407086 SOGA1O94964 1423 aa16.39■□□□□ 0.22
BCAS3-202ENST00000407086 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
BCAS3-202ENST00000407086 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
BCAS3-202ENST00000407086 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
BCAS3-202ENST00000407086 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
BCAS3-202ENST00000407086 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
BCAS3-202ENST00000407086 MSH5O43196 834 aa16.34■□□□□ 0.21
BCAS3-202ENST00000407086 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.21
BCAS3-202ENST00000407086 NBR1Q14596 966 aa16.33■□□□□ 0.2
BCAS3-202ENST00000407086 CEP162Q5TB80 1403 aa16.32■□□□□ 0.2
BCAS3-202ENST00000407086 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
BCAS3-202ENST00000407086 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
BCAS3-202ENST00000407086 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.29■□□□□ 0.2
BCAS3-202ENST00000407086 RUSC2Q8N2Y8 1516 aa16.28■□□□□ 0.2
BCAS3-202ENST00000407086 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
BCAS3-202ENST00000407086 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
BCAS3-202ENST00000407086 IRX6P78412 446 aaPredicted RBP16.22■□□□□ 0.19
BCAS3-202ENST00000407086 TRIM52Q96A61 297 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms