RNA–Protein interactions for RNA: ENST00000404826.6

SDK1-202, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SDK1, Length 10,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-202ENST00000404826 TMC1Q8TDI8 760 aa23.43■■□□□ 1.34
SDK1-202ENST00000404826 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
SDK1-202ENST00000404826 GOLGA6L1Q8N7Z2 621 aa23.39■■□□□ 1.34
SDK1-202ENST00000404826 WDR43Q15061 677 aaKnown RBP eCLIP23.39■■□□□ 1.33
SDK1-202ENST00000404826 DDX10Q13206 875 aaKnown RBP23.38■■□□□ 1.33
SDK1-202ENST00000404826 MRS2Q9HD23 443 aa23.38■■□□□ 1.33
SDK1-202ENST00000404826 LAS1LQ9Y4W2 734 aaKnown RBP23.33■■□□□ 1.33
SDK1-202ENST00000404826 KIAA2012Q0VF49 1180 aa23.33■■□□□ 1.32
SDK1-202ENST00000404826 SALL2Q9Y467 1007 aaPredicted RBP23.33■■□□□ 1.32
SDK1-202ENST00000404826 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
SDK1-202ENST00000404826 PNNQ9H307 717 aaKnown RBP23.3■■□□□ 1.32
SDK1-202ENST00000404826 A0A0U1RQG5 324 aaPredicted RBP23.27■■□□□ 1.32
SDK1-202ENST00000404826 DEKP35659 375 aaKnown RBP23.26■■□□□ 1.31
SDK1-202ENST00000404826 HSP90AA2PQ14568 343 aaPredicted RBP23.25■■□□□ 1.31
SDK1-202ENST00000404826 CHMP4BQ9H444 224 aaKnown RBP23.23■■□□□ 1.31
SDK1-202ENST00000404826 NOC3LQ8WTT2 800 aaKnown RBP23.23■■□□□ 1.31
SDK1-202ENST00000404826 CFAP44Q96MT7 982 aa23.22■■□□□ 1.31
SDK1-202ENST00000404826 DRC7Q8IY82 874 aa23.19■■□□□ 1.3
SDK1-202ENST00000404826 GOLGA6L4A6NEF3 574 aa23.18■■□□□ 1.3
SDK1-202ENST00000404826 PLCB2Q00722 1185 aa23.17■■□□□ 1.3
SDK1-202ENST00000404826 MIER1Q8N108 512 aa23.17■■□□□ 1.3
SDK1-202ENST00000404826 TPRNQ4KMQ1 711 aa23.16■■□□□ 1.3
SDK1-202ENST00000404826 HSP90AB1P08238 724 aaKnown RBP23.15■■□□□ 1.3
SDK1-202ENST00000404826 SYAP1Q96A49 352 aaPredicted RBP23.14■■□□□ 1.3
SDK1-202ENST00000404826 HSCBQ8IWL3 235 aa23.13■■□□□ 1.29
SDK1-202ENST00000404826 GOLGA6L3A6NEY3 463 aa23.11■■□□□ 1.29
SDK1-202ENST00000404826 FTSJ3Q8IY81 847 aaKnown RBP23.09■■□□□ 1.29
SDK1-202ENST00000404826 ZNF777Q9ULD5 760 aaPredicted RBP23.08■■□□□ 1.29
SDK1-202ENST00000404826 GBP4Q96PP9 640 aa23.06■■□□□ 1.28
SDK1-202ENST00000404826 ARID3CA6NKF2 412 aa23.03■■□□□ 1.28
SDK1-202ENST00000404826 PPP4R2Q9NY27 417 aa23.02■■□□□ 1.28
SDK1-202ENST00000404826 MS4A1P11836 297 aa23.01■■□□□ 1.27
SDK1-202ENST00000404826 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.01■■□□□ 1.27
SDK1-202ENST00000404826 STAG3Q9UJ98 1225 aa23.01■■□□□ 1.27
SDK1-202ENST00000404826 ESF1Q9H501 851 aaKnown RBP23■■□□□ 1.27
SDK1-202ENST00000404826 PHF14O94880 888 aa22.99■■□□□ 1.27
SDK1-202ENST00000404826 APPP05067 770 aa22.98■■□□□ 1.27
SDK1-202ENST00000404826 MCCP23508 829 aa22.97■■□□□ 1.27
SDK1-202ENST00000404826 NOM1Q5C9Z4 860 aaKnown RBP22.97■■□□□ 1.27
SDK1-202ENST00000404826 HTATSF1O43719 755 aaKnown RBP22.97■■□□□ 1.27
SDK1-202ENST00000404826 GPS2Q13227 327 aa22.96■■□□□ 1.27
SDK1-202ENST00000404826 ARID3AQ99856 593 aa22.96■■□□□ 1.27
SDK1-202ENST00000404826 TPM4P67936 248 aa22.93■■□□□ 1.26
SDK1-202ENST00000404826 FGD1P98174 961 aa22.93■■□□□ 1.26
SDK1-202ENST00000404826 FBLN2P98095 1184 aa22.92■■□□□ 1.26
SDK1-202ENST00000404826 CCDC34Q96HJ3 373 aa22.92■■□□□ 1.26
SDK1-202ENST00000404826 RGS3P49796 1198 aa22.92■■□□□ 1.26
SDK1-202ENST00000404826 P3H3Q8IVL6 736 aa22.9■■□□□ 1.26
SDK1-202ENST00000404826 TULP1O00294 542 aaPredicted RBP22.9■■□□□ 1.26
SDK1-202ENST00000404826 CHGAP10645 457 aaKnown RBP22.89■■□□□ 1.25
SDK1-202ENST00000404826 TEX35Q5T0J7 233 aa22.88■■□□□ 1.25
SDK1-202ENST00000404826 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
SDK1-202ENST00000404826 MTERF4Q7Z6M4 381 aaKnown RBP22.85■■□□□ 1.25
SDK1-202ENST00000404826 CSPP1Q1MSJ5 1256 aa22.82■■□□□ 1.24
SDK1-202ENST00000404826 EIF4G2P78344 907 aaKnown RBP eCLIP22.82■■□□□ 1.24
SDK1-202ENST00000404826 VSIG10Q8N0Z9 540 aa22.81■■□□□ 1.24
SDK1-202ENST00000404826 KCNJ4P48050 445 aa22.8■■□□□ 1.24
SDK1-202ENST00000404826 CCDC70Q6NSX1 233 aa22.79■■□□□ 1.24
SDK1-202ENST00000404826 CFAP53Q96M91 514 aa22.78■■□□□ 1.24
SDK1-202ENST00000404826 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
SDK1-202ENST00000404826 RRP12Q5JTH9 1297 aaKnown RBP22.77■■□□□ 1.24
SDK1-202ENST00000404826 ZNF771Q7L3S4 317 aaPredicted RBP22.77■■□□□ 1.24
SDK1-202ENST00000404826 CDCA8Q53HL2 280 aa22.75■■□□□ 1.23
SDK1-202ENST00000404826 GNL2Q13823 731 aaKnown RBP22.74■■□□□ 1.23
SDK1-202ENST00000404826 KDM2AQ9Y2K7 1162 aa22.73■■□□□ 1.23
SDK1-202ENST00000404826 A0A0G2JS52 829 aa22.72■■□□□ 1.23
SDK1-202ENST00000404826 CALD1Q05682 793 aaKnown RBP22.72■■□□□ 1.23
SDK1-202ENST00000404826 HMMRO75330 724 aa22.72■■□□□ 1.23
SDK1-202ENST00000404826 CLSTN1O94985 981 aa22.71■■□□□ 1.23
SDK1-202ENST00000404826 CWC15Q9P013 229 aaKnown RBP22.71■■□□□ 1.23
SDK1-202ENST00000404826 MAP7D2Q96T17 732 aa22.7■■□□□ 1.22
SDK1-202ENST00000404826 TPM3P06753 285 aa22.7■■□□□ 1.22
SDK1-202ENST00000404826 NAP1L2Q9ULW6 460 aaPredicted RBP22.69■■□□□ 1.22
SDK1-202ENST00000404826 KNSTRNQ9Y448 316 aa22.69■■□□□ 1.22
SDK1-202ENST00000404826 HIRIP3Q9BW71 556 aaPredicted RBP22.69■■□□□ 1.22
SDK1-202ENST00000404826 TAOK2Q9UL54 1235 aa22.68■■□□□ 1.22
SDK1-202ENST00000404826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.68■■□□□ 1.229e-7■■□□□ 12.2
SDK1-202ENST00000404826 ZBTB7CA1YPR0 619 aa22.67■■□□□ 1.22
SDK1-202ENST00000404826 DDX11L8A8MPP1 907 aa22.66■■□□□ 1.22
SDK1-202ENST00000404826 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
SDK1-202ENST00000404826 OS9Q13438 667 aaPredicted RBP22.65■■□□□ 1.22
SDK1-202ENST00000404826 RBM19Q9Y4C8 960 aaKnown RBP22.65■■□□□ 1.22
SDK1-202ENST00000404826 CCDC66A2RUB6 948 aa22.64■■□□□ 1.22
SDK1-202ENST00000404826 STK11IPQ8N1F8 1099 aa22.63■■□□□ 1.21
SDK1-202ENST00000404826 SPRYD3Q8NCJ5 442 aa22.63■■□□□ 1.21
SDK1-202ENST00000404826 CLIP1P30622 1438 aa22.62■■□□□ 1.21
SDK1-202ENST00000404826 CHIC2Q9UKJ5 165 aa22.62■■□□□ 1.21
SDK1-202ENST00000404826 B4GALNT3Q6L9W6 998 aa22.62■■□□□ 1.21
SDK1-202ENST00000404826 MTUS2Q5JR59 1369 aa22.61■■□□□ 1.21
SDK1-202ENST00000404826 GZF1Q9H116 711 aaPredicted RBP22.6■■□□□ 1.21
SDK1-202ENST00000404826 MAPK8IP3Q9UPT6 1336 aa22.6■■□□□ 1.21
SDK1-202ENST00000404826 FRAT1Q92837 279 aaPredicted RBP22.59■■□□□ 1.21
SDK1-202ENST00000404826 CCDC191Q8NCU4 936 aa22.59■■□□□ 1.21
SDK1-202ENST00000404826 HAP1P54257 671 aaPredicted RBP22.58■■□□□ 1.21
SDK1-202ENST00000404826 PKNOX2Q96KN3 472 aa22.58■■□□□ 1.21
SDK1-202ENST00000404826 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.58■■□□□ 1.21
SDK1-202ENST00000404826 KIAA1211Q6ZU35 1233 aa22.57■■□□□ 1.2
SDK1-202ENST00000404826 CEP89Q96ST8 783 aa22.56■■□□□ 1.2
SDK1-202ENST00000404826 HSP90B1P14625 803 aaKnown RBP22.56■■□□□ 1.2
SDK1-202ENST00000404826 RDXP35241 583 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms