RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 FAM69CQ0P6D2 419 aa25.82■■□□□ 1.72
VAMP1-203ENST00000400911 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
VAMP1-203ENST00000400911 IGF1RP08069 1367 aa25.74■■□□□ 1.71
VAMP1-203ENST00000400911 ABCC10Q5T3U5 1492 aa25.72■■□□□ 1.71
VAMP1-203ENST00000400911 KIF13AQ9H1H9 1805 aa25.69■■□□□ 1.7
VAMP1-203ENST00000400911 KIAA0586Q9BVV6 1533 aa25.68■■□□□ 1.7
VAMP1-203ENST00000400911 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
VAMP1-203ENST00000400911 MAPKBP1O60336 1514 aa25.64■■□□□ 1.7
VAMP1-203ENST00000400911 ADCY10Q96PN6 1610 aa25.61■■□□□ 1.69
VAMP1-203ENST00000400911 TTBK1Q5TCY1 1321 aaPredicted RBP25.59■■□□□ 1.69
VAMP1-203ENST00000400911 DIP2BQ9P265 1576 aa25.56■■□□□ 1.68
VAMP1-203ENST00000400911 PTPRGP23470 1445 aa25.55■■□□□ 1.68
VAMP1-203ENST00000400911 CARMIL1Q5VZK9 1371 aa25.55■■□□□ 1.68
VAMP1-203ENST00000400911 CUL7Q14999 1698 aa25.49■■□□□ 1.67
VAMP1-203ENST00000400911 KDM4FA0A1W2PPD8 638 aa25.48■■□□□ 1.67
VAMP1-203ENST00000400911 TNIKQ9UKE5 1360 aa25.46■■□□□ 1.67
VAMP1-203ENST00000400911 CARMIL2Q6F5E8 1435 aa25.45■■□□□ 1.66
VAMP1-203ENST00000400911 KDM6BO15054 1643 aa25.42■■□□□ 1.66
VAMP1-203ENST00000400911 ABCC2Q92887 1545 aa25.39■■□□□ 1.66
VAMP1-203ENST00000400911 ASXL2Q76L83 1435 aa25.37■■□□□ 1.65
VAMP1-203ENST00000400911 PLB1Q6P1J6 1458 aa25.33■■□□□ 1.65
VAMP1-203ENST00000400911 TSPOAP1O95153 1857 aa25.32■■□□□ 1.64
VAMP1-203ENST00000400911 UACAQ9BZF9 1416 aa25.32■■□□□ 1.64
VAMP1-203ENST00000400911 IQGAP2Q13576 1575 aa25.31■■□□□ 1.64
VAMP1-203ENST00000400911 UHRF1BP1LA0JNW5 1464 aa25.29■■□□□ 1.64
VAMP1-203ENST00000400911 DISP1Q96F81 1524 aa25.28■■□□□ 1.64
VAMP1-203ENST00000400911 GLI2P10070 1586 aa25.24■■□□□ 1.63
VAMP1-203ENST00000400911 RAPGEF2Q9Y4G8 1499 aa25.22■■□□□ 1.63
VAMP1-203ENST00000400911 EPRSP07814 1512 aaKnown RBP25.19■■□□□ 1.62
VAMP1-203ENST00000400911 KDM5BQ9UGL1 1544 aa25.19■■□□□ 1.62
VAMP1-203ENST00000400911 COL17A1Q9UMD9 1497 aaPredicted RBP25.18■■□□□ 1.62
VAMP1-203ENST00000400911 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
VAMP1-203ENST00000400911 PPRC1Q5VV67 1664 aaKnown RBP25.15■■□□□ 1.62
VAMP1-203ENST00000400911 ADGRL1O94910 1474 aa25.1■■□□□ 1.61
VAMP1-203ENST00000400911 TEX14Q8IWB6 1497 aa25.09■■□□□ 1.61
VAMP1-203ENST00000400911 KIAA0556O60303 1618 aa25.08■■□□□ 1.6
VAMP1-203ENST00000400911 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
VAMP1-203ENST00000400911 MAP3K4Q9Y6R4 1608 aa25.05■■□□□ 1.6
VAMP1-203ENST00000400911 WDR7Q9Y4E6 1490 aa25.04■■□□□ 1.6
VAMP1-203ENST00000400911 KCNH8Q96L42 1107 aa25.04■■□□□ 1.6
VAMP1-203ENST00000400911 ILDR1Q86SU0 546 aaPredicted RBP25.01■■□□□ 1.59
VAMP1-203ENST00000400911 CD109Q6YHK3 1445 aa24.97■■□□□ 1.59
VAMP1-203ENST00000400911 GOLGA3Q08378 1498 aa24.96■■□□□ 1.59
VAMP1-203ENST00000400911 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
VAMP1-203ENST00000400911 ABCA8O94911 1581 aa24.9■■□□□ 1.58
VAMP1-203ENST00000400911 ARID3CA6NKF2 412 aa24.9■■□□□ 1.58
VAMP1-203ENST00000400911 PRXQ9BXM0 1461 aa24.89■■□□□ 1.58
VAMP1-203ENST00000400911 P3H3Q8IVL6 736 aa24.88■■□□□ 1.57
VAMP1-203ENST00000400911 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
VAMP1-203ENST00000400911 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
VAMP1-203ENST00000400911 HECW2Q9P2P5 1572 aa24.81■■□□□ 1.56
VAMP1-203ENST00000400911 ATP10BO94823 1461 aa24.78■■□□□ 1.56
VAMP1-203ENST00000400911 CFAP43Q8NDM7 1665 aa24.78■■□□□ 1.56
VAMP1-203ENST00000400911 ARAP3Q8WWN8 1544 aa24.71■■□□□ 1.55
VAMP1-203ENST00000400911 CSRNP3Q8WYN3 585 aa24.71■■□□□ 1.55
VAMP1-203ENST00000400911 RAPGEF3O95398 923 aa24.7■■□□□ 1.54
VAMP1-203ENST00000400911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.69■■□□□ 1.54
VAMP1-203ENST00000400911 HNRNPUL2Q1KMD3 747 aaKnown RBP24.69■■□□□ 1.54
VAMP1-203ENST00000400911 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
VAMP1-203ENST00000400911 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
VAMP1-203ENST00000400911 KIF21BO75037 1637 aa24.63■■□□□ 1.53
VAMP1-203ENST00000400911 ABCA9Q8IUA7 1624 aa24.58■■□□□ 1.53
VAMP1-203ENST00000400911 NEO1Q92859 1461 aa24.57■■□□□ 1.52
VAMP1-203ENST00000400911 SAMD9Q5K651 1589 aa24.56■■□□□ 1.52
VAMP1-203ENST00000400911 ARID4BQ4LE39 1312 aaPredicted RBP24.56■■□□□ 1.52
VAMP1-203ENST00000400911 PTPRMP28827 1452 aa24.54■■□□□ 1.52
VAMP1-203ENST00000400911 NUP153P49790 1475 aaKnown RBP24.54■■□□□ 1.52
VAMP1-203ENST00000400911 RAPGEF6Q8TEU7 1601 aa24.53■■□□□ 1.52
VAMP1-203ENST00000400911 PLEKHD1A6NEE1 506 aa24.52■■□□□ 1.52
VAMP1-203ENST00000400911 FHOD3Q2V2M9 1422 aa24.52■■□□□ 1.52
VAMP1-203ENST00000400911 ADAMTSL3P82987 1691 aa24.46■■□□□ 1.51
VAMP1-203ENST00000400911 FBXO41Q8TF61 875 aa24.45■■□□□ 1.5
VAMP1-203ENST00000400911 FRMPD1Q5SYB0 1578 aa24.44■■□□□ 1.5
VAMP1-203ENST00000400911 DENND4BO75064 1496 aaPredicted RBP24.43■■□□□ 1.5
VAMP1-203ENST00000400911 EEA1Q15075 1411 aa24.43■■□□□ 1.5
VAMP1-203ENST00000400911 AKNAQ7Z591 1439 aa24.42■■□□□ 1.5
VAMP1-203ENST00000400911 FANCAO15360 1455 aa24.38■■□□□ 1.49
VAMP1-203ENST00000400911 BCORL1Q5H9F3 1711 aa24.36■■□□□ 1.49
VAMP1-203ENST00000400911 PLPPR3Q6T4P5 718 aa24.36■■□□□ 1.49
VAMP1-203ENST00000400911 MADDQ8WXG6 1647 aa24.35■■□□□ 1.49
VAMP1-203ENST00000400911 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.34■■□□□ 1.49
VAMP1-203ENST00000400911 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.49
VAMP1-203ENST00000400911 ARHGEF40Q8TER5 1519 aa24.32■■□□□ 1.48
VAMP1-203ENST00000400911 PCF11O94913 1555 aaKnown RBP24.32■■□□□ 1.48
VAMP1-203ENST00000400911 HSPA2P54652 639 aa24.3■■□□□ 1.48
VAMP1-203ENST00000400911 EHMT2Q96KQ7 1210 aa24.3■■□□□ 1.48
VAMP1-203ENST00000400911 YEATS2Q9ULM3 1422 aa24.29■■□□□ 1.48
VAMP1-203ENST00000400911 MLECQ14165 292 aa24.29■■□□□ 1.48
VAMP1-203ENST00000400911 ATP1B4Q9UN42 357 aaPredicted RBP24.29■■□□□ 1.48
VAMP1-203ENST00000400911 POGZQ7Z3K3 1410 aa24.28■■□□□ 1.48
VAMP1-203ENST00000400911 EFCAB5A4FU69 1503 aa24.28■■□□□ 1.48
VAMP1-203ENST00000400911 CDK13Q14004 1512 aaKnown RBP24.26■■□□□ 1.47
VAMP1-203ENST00000400911 TTC37Q6PGP7 1564 aa24.26■■□□□ 1.47
VAMP1-203ENST00000400911 RICTORQ6R327 1708 aa24.25■■□□□ 1.47
VAMP1-203ENST00000400911 SCAPERQ9BY12 1400 aa24.25■■□□□ 1.47
VAMP1-203ENST00000400911 UBTFP17480 764 aaKnown RBP24.24■■□□□ 1.47
VAMP1-203ENST00000400911 PLCH2O75038 1416 aa24.24■■□□□ 1.47
VAMP1-203ENST00000400911 MAGI2Q86UL8 1455 aa24.23■■□□□ 1.47
VAMP1-203ENST00000400911 ZMYM4Q5VZL5 1548 aa24.23■■□□□ 1.47
VAMP1-203ENST00000400911 ZFYVE16Q7Z3T8 1539 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms