RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.52
RERE-204ENST00000400908 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
RERE-204ENST00000400908 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
RERE-204ENST00000400908 MROH2BQ7Z745 1585 aa18.29■□□□□ 0.52
RERE-204ENST00000400908 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
RERE-204ENST00000400908 CEP162Q5TB80 1403 aa18.28■□□□□ 0.52
RERE-204ENST00000400908 GOLGA6L6A8MZA4 724 aa18.23■□□□□ 0.51
RERE-204ENST00000400908 WDR43Q15061 677 aaKnown RBP eCLIP18.21■□□□□ 0.51
RERE-204ENST00000400908 TULP1O00294 542 aaPredicted RBP18.21■□□□□ 0.5
RERE-204ENST00000400908 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
RERE-204ENST00000400908 PPM1GO15355 546 aaPredicted RBP18.18■□□□□ 0.5
RERE-204ENST00000400908 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
RERE-204ENST00000400908 NRDCO43847 1150 aa18.18■□□□□ 0.5
RERE-204ENST00000400908 TNIKQ9UKE5 1360 aa18.17■□□□□ 0.5
RERE-204ENST00000400908 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
RERE-204ENST00000400908 CEP164Q9UPV0 1460 aa18.16■□□□□ 0.5
RERE-204ENST00000400908 ESF1Q9H501 851 aaKnown RBP18.15■□□□□ 0.5
RERE-204ENST00000400908 PLCB2Q00722 1185 aa18.14■□□□□ 0.5
RERE-204ENST00000400908 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
RERE-204ENST00000400908 CHAF1AQ13111 956 aaPredicted RBP18.14■□□□□ 0.49
RERE-204ENST00000400908 TPRNQ4KMQ1 711 aa18.13■□□□□ 0.49
RERE-204ENST00000400908 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
RERE-204ENST00000400908 MTUS2Q5JR59 1369 aa18.13■□□□□ 0.49
RERE-204ENST00000400908 TONSLQ96HA7 1378 aa18.12■□□□□ 0.49
RERE-204ENST00000400908 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
RERE-204ENST00000400908 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
RERE-204ENST00000400908 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
RERE-204ENST00000400908 CASC1Q6TDU7 716 aa18.1■□□□□ 0.49
RERE-204ENST00000400908 DDX10Q13206 875 aaKnown RBP18.1■□□□□ 0.49
RERE-204ENST00000400908 WIZO95785 1651 aa18.09■□□□□ 0.49
RERE-204ENST00000400908 SOGA1O94964 1423 aa18.08■□□□□ 0.49
RERE-204ENST00000400908 IRX6P78412 446 aaPredicted RBP18.07■□□□□ 0.48
RERE-204ENST00000400908 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
RERE-204ENST00000400908 MRS2Q9HD23 443 aa18.05■□□□□ 0.48
RERE-204ENST00000400908 L1TD1Q5T7N2 865 aaKnown RBP18.05■□□□□ 0.48
RERE-204ENST00000400908 TNNT3P45378 269 aaPredicted RBP18.04■□□□□ 0.48
RERE-204ENST00000400908 A0A0G2JS52 829 aa18.03■□□□□ 0.48
RERE-204ENST00000400908 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
RERE-204ENST00000400908 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
RERE-204ENST00000400908 MSNP26038 577 aaKnown RBP18■□□□□ 0.47
RERE-204ENST00000400908 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
RERE-204ENST00000400908 LAS1LQ9Y4W2 734 aaKnown RBP17.96■□□□□ 0.47
RERE-204ENST00000400908 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.47
RERE-204ENST00000400908 PNNQ9H307 717 aaKnown RBP17.93■□□□□ 0.46
RERE-204ENST00000400908 CUX2O14529 1486 aa17.93■□□□□ 0.46
RERE-204ENST00000400908 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
RERE-204ENST00000400908 TSPY4P0CV99 314 aa17.91■□□□□ 0.46
RERE-204ENST00000400908 TSPY10P0CW01 314 aa17.91■□□□□ 0.46
RERE-204ENST00000400908 RRP7BPQ9NSQ0 103 aa17.91■□□□□ 0.46
RERE-204ENST00000400908 HSP90AB1P08238 724 aaKnown RBP17.9■□□□□ 0.46
RERE-204ENST00000400908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.469e-10■■■□□ 18.2
RERE-204ENST00000400908 GOLGA6L4A6NEF3 574 aa17.9■□□□□ 0.46
RERE-204ENST00000400908 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
RERE-204ENST00000400908 TAOK2Q9UL54 1235 aa17.89■□□□□ 0.45
RERE-204ENST00000400908 NOP58Q9Y2X3 529 aaKnown RBP17.89■□□□□ 0.45
RERE-204ENST00000400908 DRC7Q8IY82 874 aa17.88■□□□□ 0.45
RERE-204ENST00000400908 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
RERE-204ENST00000400908 ERCC6Q03468 1493 aa17.87■□□□□ 0.45
RERE-204ENST00000400908 CLSTN1O94985 981 aa17.87■□□□□ 0.45
RERE-204ENST00000400908 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
RERE-204ENST00000400908 FGD1P98174 961 aa17.87■□□□□ 0.45
RERE-204ENST00000400908 ARID4BQ4LE39 1312 aaPredicted RBP17.87■□□□□ 0.45
RERE-204ENST00000400908 NOC3LQ8WTT2 800 aaKnown RBP17.86■□□□□ 0.45
RERE-204ENST00000400908 CALRP27797 417 aaKnown RBP17.84■□□□□ 0.45
RERE-204ENST00000400908 KIAA2012Q0VF49 1180 aa17.83■□□□□ 0.45
RERE-204ENST00000400908 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.45
RERE-204ENST00000400908 FTSJ3Q8IY81 847 aaKnown RBP17.83■□□□□ 0.44
RERE-204ENST00000400908 PLEKHD1A6NEE1 506 aa17.82■□□□□ 0.44
RERE-204ENST00000400908 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
RERE-204ENST00000400908 HIRIP3Q9BW71 556 aaPredicted RBP17.79■□□□□ 0.44
RERE-204ENST00000400908 NAP1L2Q9ULW6 460 aaPredicted RBP17.79■□□□□ 0.44
RERE-204ENST00000400908 KCNH8Q96L42 1107 aa17.78■□□□□ 0.44
RERE-204ENST00000400908 GOLGA6L1Q8N7Z2 621 aa17.77■□□□□ 0.44
RERE-204ENST00000400908 KDM2AQ9Y2K7 1162 aa17.77■□□□□ 0.44
RERE-204ENST00000400908 FHAD1B1AJZ9 1412 aa17.77■□□□□ 0.44
RERE-204ENST00000400908 KCNJ4P48050 445 aa17.77■□□□□ 0.44
RERE-204ENST00000400908 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.43
RERE-204ENST00000400908 MIER1Q8N108 512 aa17.77■□□□□ 0.43
RERE-204ENST00000400908 ARID3AQ99856 593 aa17.76■□□□□ 0.43
RERE-204ENST00000400908 VPS8Q8N3P4 1428 aa17.75■□□□□ 0.43
RERE-204ENST00000400908 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
RERE-204ENST00000400908 PRM3Q9NNZ6 103 aa17.75■□□□□ 0.43
RERE-204ENST00000400908 DEKP35659 375 aaKnown RBP17.75■□□□□ 0.43
RERE-204ENST00000400908 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
RERE-204ENST00000400908 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
RERE-204ENST00000400908 CFDP1Q9UEE9 299 aaPredicted RBP17.74■□□□□ 0.43
RERE-204ENST00000400908 RGS3P49796 1198 aa17.74■□□□□ 0.43
RERE-204ENST00000400908 CFAP53Q96M91 514 aa17.73■□□□□ 0.43
RERE-204ENST00000400908 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
RERE-204ENST00000400908 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
RERE-204ENST00000400908 SETQ01105 290 aaPredicted RBP17.71■□□□□ 0.43
RERE-204ENST00000400908 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
RERE-204ENST00000400908 OS9Q13438 667 aaPredicted RBP17.7■□□□□ 0.42
RERE-204ENST00000400908 USP35Q9P2H5 1018 aa17.69■□□□□ 0.42
RERE-204ENST00000400908 CADPSQ9ULU8 1353 aa17.69■□□□□ 0.42
RERE-204ENST00000400908 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
RERE-204ENST00000400908 EIF4G2P78344 907 aaKnown RBP eCLIP17.68■□□□□ 0.422e-7■■■■■ 34.4
RERE-204ENST00000400908 PPP4R2Q9NY27 417 aa17.66■□□□□ 0.42
RERE-204ENST00000400908 MCCP23508 829 aa17.66■□□□□ 0.42
RERE-204ENST00000400908 KANK4Q5T7N3 995 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms