RNA–Protein interactions for RNA: ENST00000400345.7

NEDD4L-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEDD4L, Length 3,647 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-205ENST00000400345 NESP48681 1621 aa20.6■□□□□ 0.89
NEDD4L-205ENST00000400345 CCNB3Q8WWL7 1395 aa20.58■□□□□ 0.88
NEDD4L-205ENST00000400345 ZNF326Q5BKZ1 582 aaKnown RBP20.58■□□□□ 0.88
NEDD4L-205ENST00000400345 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
NEDD4L-205ENST00000400345 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
NEDD4L-205ENST00000400345 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
NEDD4L-205ENST00000400345 ANP32EQ9BTT0 268 aa20.53■□□□□ 0.88
NEDD4L-205ENST00000400345 TONSLQ96HA7 1378 aa20.52■□□□□ 0.88
NEDD4L-205ENST00000400345 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.88
NEDD4L-205ENST00000400345 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.87
NEDD4L-205ENST00000400345 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
NEDD4L-205ENST00000400345 RRP7BPQ9NSQ0 103 aa20.47■□□□□ 0.87
NEDD4L-205ENST00000400345 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
NEDD4L-205ENST00000400345 CUX1P39880 1505 aa20.45■□□□□ 0.86
NEDD4L-205ENST00000400345 IGF1RP08069 1367 aa20.44■□□□□ 0.86
NEDD4L-205ENST00000400345 KIF21BO75037 1637 aa20.41■□□□□ 0.86
NEDD4L-205ENST00000400345 RBM19Q9Y4C8 960 aaKnown RBP20.41■□□□□ 0.86
NEDD4L-205ENST00000400345 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
NEDD4L-205ENST00000400345 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
NEDD4L-205ENST00000400345 CFTRP13569 1480 aa20.39■□□□□ 0.85
NEDD4L-205ENST00000400345 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.85
NEDD4L-205ENST00000400345 ZNF777Q9ULD5 760 aaPredicted RBP20.38■□□□□ 0.85
NEDD4L-205ENST00000400345 FHOD3Q2V2M9 1422 aa20.35■□□□□ 0.85
NEDD4L-205ENST00000400345 PEG3Q9GZU2 1588 aa20.35■□□□□ 0.85
NEDD4L-205ENST00000400345 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
NEDD4L-205ENST00000400345 ARAP1Q96P48 1450 aa20.34■□□□□ 0.85
NEDD4L-205ENST00000400345 FOXD1Q16676 465 aa20.32■□□□□ 0.84
NEDD4L-205ENST00000400345 NBR1Q14596 966 aa20.3■□□□□ 0.84
NEDD4L-205ENST00000400345 MTUS2Q5JR59 1369 aa20.3■□□□□ 0.84
NEDD4L-205ENST00000400345 MRS2Q9HD23 443 aa20.29■□□□□ 0.84
NEDD4L-205ENST00000400345 SETD5Q9C0A6 1442 aa20.29■□□□□ 0.84
NEDD4L-205ENST00000400345 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
NEDD4L-205ENST00000400345 B4GALNT3Q6L9W6 998 aa20.27■□□□□ 0.83
NEDD4L-205ENST00000400345 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
NEDD4L-205ENST00000400345 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
NEDD4L-205ENST00000400345 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
NEDD4L-205ENST00000400345 PRXQ9BXM0 1461 aa20.22■□□□□ 0.83
NEDD4L-205ENST00000400345 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
NEDD4L-205ENST00000400345 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
NEDD4L-205ENST00000400345 ARHGAP35Q9NRY4 1499 aa20.17■□□□□ 0.82
NEDD4L-205ENST00000400345 PHLDB1Q86UU1 1377 aa20.17■□□□□ 0.82
NEDD4L-205ENST00000400345 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.823e-8■■■■□ 24.8
NEDD4L-205ENST00000400345 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
NEDD4L-205ENST00000400345 HSPA5P11021 654 aaKnown RBP20.14■□□□□ 0.81
NEDD4L-205ENST00000400345 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
NEDD4L-205ENST00000400345 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
NEDD4L-205ENST00000400345 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.81
NEDD4L-205ENST00000400345 ERCC6Q03468 1493 aa20.08■□□□□ 0.8
NEDD4L-205ENST00000400345 CCER2I3L3R5 266 aa20.07■□□□□ 0.8
NEDD4L-205ENST00000400345 MYT1LQ9UL68 1186 aa20.06■□□□□ 0.8
NEDD4L-205ENST00000400345 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
NEDD4L-205ENST00000400345 RTL5Q5HYW3 569 aaPredicted RBP20.05■□□□□ 0.8
NEDD4L-205ENST00000400345 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
NEDD4L-205ENST00000400345 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
NEDD4L-205ENST00000400345 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
NEDD4L-205ENST00000400345 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
NEDD4L-205ENST00000400345 CCDC184Q52MB2 194 aa20.02■□□□□ 0.79
NEDD4L-205ENST00000400345 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
NEDD4L-205ENST00000400345 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
NEDD4L-205ENST00000400345 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
NEDD4L-205ENST00000400345 L3MBTL2Q969R5 705 aa19.97■□□□□ 0.79
NEDD4L-205ENST00000400345 PPP4R2Q9NY27 417 aa19.95■□□□□ 0.78
NEDD4L-205ENST00000400345 ZNF644Q9H582 1327 aaPredicted RBP19.94■□□□□ 0.78
NEDD4L-205ENST00000400345 ANP32AP39687 249 aaKnown RBP19.94■□□□□ 0.78
NEDD4L-205ENST00000400345 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
NEDD4L-205ENST00000400345 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
NEDD4L-205ENST00000400345 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
NEDD4L-205ENST00000400345 MSH5O43196 834 aa19.9■□□□□ 0.78
NEDD4L-205ENST00000400345 TIMELESSQ9UNS1 1208 aa19.9■□□□□ 0.78
NEDD4L-205ENST00000400345 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
NEDD4L-205ENST00000400345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.788e-7■■■□□ 14.8
NEDD4L-205ENST00000400345 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
NEDD4L-205ENST00000400345 WASHC2AQ641Q2 1341 aa19.87■□□□□ 0.77
NEDD4L-205ENST00000400345 CFDP1Q9UEE9 299 aaPredicted RBP19.86■□□□□ 0.77
NEDD4L-205ENST00000400345 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
NEDD4L-205ENST00000400345 DAXXQ9UER7 740 aaPredicted RBP19.84■□□□□ 0.77
NEDD4L-205ENST00000400345 RTN4Q9NQC3 1192 aaKnown RBP19.84■□□□□ 0.77
NEDD4L-205ENST00000400345 RGL3Q3MIN7 710 aa19.83■□□□□ 0.77
NEDD4L-205ENST00000400345 ZBTB47Q9UFB7 747 aaPredicted RBP19.83■□□□□ 0.77
NEDD4L-205ENST00000400345 DEKP35659 375 aaKnown RBP19.82■□□□□ 0.76
NEDD4L-205ENST00000400345 CCDC18Q5T9S5 1454 aa19.82■□□□□ 0.76
NEDD4L-205ENST00000400345 LAS1LQ9Y4W2 734 aaKnown RBP19.82■□□□□ 0.76
NEDD4L-205ENST00000400345 MAPKBP1O60336 1514 aa19.8■□□□□ 0.76
NEDD4L-205ENST00000400345 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
NEDD4L-205ENST00000400345 PRKRIP1Q9H875 184 aaPredicted RBP19.8■□□□□ 0.76
NEDD4L-205ENST00000400345 ZNF608Q9ULD9 1512 aaPredicted RBP19.8■□□□□ 0.76
NEDD4L-205ENST00000400345 FMN1Q68DA7 1419 aa19.79■□□□□ 0.76
NEDD4L-205ENST00000400345 C11orf95C9JLR9 678 aaPredicted RBP19.77■□□□□ 0.76
NEDD4L-205ENST00000400345 NOP58Q9Y2X3 529 aaKnown RBP19.77■□□□□ 0.76
NEDD4L-205ENST00000400345 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
NEDD4L-205ENST00000400345 PLEKHD1A6NEE1 506 aa19.76■□□□□ 0.75
NEDD4L-205ENST00000400345 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
NEDD4L-205ENST00000400345 CARD11Q9BXL7 1154 aa19.74■□□□□ 0.75
NEDD4L-205ENST00000400345 FGD6Q6ZV73 1430 aa19.73■□□□□ 0.75
NEDD4L-205ENST00000400345 TIAM1Q13009 1591 aa19.72■□□□□ 0.75
NEDD4L-205ENST00000400345 HNRNPMP52272 730 aaKnown RBP eCLIP19.69■□□□□ 0.747e-7■■■■□ 23.1
NEDD4L-205ENST00000400345 NBPF8Q3BBV2 869 aa19.69■□□□□ 0.74
NEDD4L-205ENST00000400345 PCF11O94913 1555 aaKnown RBP19.68■□□□□ 0.74
NEDD4L-205ENST00000400345 PAK3O75914 559 aaPredicted RBP19.68■□□□□ 0.74
NEDD4L-205ENST00000400345 PKD2Q13563 968 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms