RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 RAD54L2Q9Y4B4 1467 aa14.61□□□□□ -0.07
BRCC3-205ENST00000399026 WRNQ14191 1432 aaPredicted RBP eCLIP14.6□□□□□ -0.07
BRCC3-205ENST00000399026 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
BRCC3-205ENST00000399026 ZBTB22O15209 634 aa14.54□□□□□ -0.08
BRCC3-205ENST00000399026 POTEHQ6S545 545 aa14.54□□□□□ -0.08
BRCC3-205ENST00000399026 SOGA1O94964 1423 aa14.54□□□□□ -0.08
BRCC3-205ENST00000399026 AQRO60306 1485 aaKnown RBP eCLIP14.51□□□□□ -0.092e-6■□□□□ 10.6
BRCC3-205ENST00000399026 PBRM1Q86U86 1689 aa14.5□□□□□ -0.09
BRCC3-205ENST00000399026 ABCB7O75027 752 aa14.5□□□□□ -0.09
BRCC3-205ENST00000399026 ABCA5Q8WWZ7 1642 aa14.49□□□□□ -0.09
BRCC3-205ENST00000399026 ABCA10Q8WWZ4 1543 aa14.49□□□□□ -0.09
BRCC3-205ENST00000399026 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
BRCC3-205ENST00000399026 CHD1O14646 1710 aa14.45□□□□□ -0.1
BRCC3-205ENST00000399026 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
BRCC3-205ENST00000399026 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
BRCC3-205ENST00000399026 GRIN2BQ13224 1484 aa14.4□□□□□ -0.1
BRCC3-205ENST00000399026 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
BRCC3-205ENST00000399026 ADAMTS12P58397 1594 aa14.36□□□□□ -0.11
BRCC3-205ENST00000399026 MAGI1Q96QZ7 1491 aaPredicted RBP14.36□□□□□ -0.11
BRCC3-205ENST00000399026 DNAJC5Q9H3Z4 198 aa14.32□□□□□ -0.12
BRCC3-205ENST00000399026 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
BRCC3-205ENST00000399026 POLA2Q14181 598 aa14.31□□□□□ -0.12
BRCC3-205ENST00000399026 SYNJ2O15056 1496 aa14.31□□□□□ -0.12
BRCC3-205ENST00000399026 FBLN2P98095 1184 aa14.29□□□□□ -0.12
BRCC3-205ENST00000399026 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
BRCC3-205ENST00000399026 GRIN2AQ12879 1464 aa14.25□□□□□ -0.13
BRCC3-205ENST00000399026 CUL7Q14999 1698 aa14.24□□□□□ -0.13
BRCC3-205ENST00000399026 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
BRCC3-205ENST00000399026 CLASP1Q7Z460 1538 aa14.24□□□□□ -0.13
BRCC3-205ENST00000399026 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
BRCC3-205ENST00000399026 FHAD1B1AJZ9 1412 aa14.23□□□□□ -0.13
BRCC3-205ENST00000399026 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
BRCC3-205ENST00000399026 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
BRCC3-205ENST00000399026 RUSC2Q8N2Y8 1516 aa14.21□□□□□ -0.13
BRCC3-205ENST00000399026 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
BRCC3-205ENST00000399026 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
BRCC3-205ENST00000399026 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
BRCC3-205ENST00000399026 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
BRCC3-205ENST00000399026 IGF1RP08069 1367 aa14.17□□□□□ -0.14
BRCC3-205ENST00000399026 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
BRCC3-205ENST00000399026 NUP160Q12769 1436 aa14.15□□□□□ -0.14
BRCC3-205ENST00000399026 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
BRCC3-205ENST00000399026 SHROOM2Q13796 1616 aa14.09□□□□□ -0.15
BRCC3-205ENST00000399026 ERCC6L2Q5T890 1561 aa14.08□□□□□ -0.16
BRCC3-205ENST00000399026 RAPGEF2Q9Y4G8 1499 aa14.06□□□□□ -0.16
BRCC3-205ENST00000399026 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
BRCC3-205ENST00000399026 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
BRCC3-205ENST00000399026 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
BRCC3-205ENST00000399026 IQGAP2Q13576 1575 aa14.02□□□□□ -0.16
BRCC3-205ENST00000399026 PRXQ9BXM0 1461 aa14.02□□□□□ -0.16
BRCC3-205ENST00000399026 EEA1Q15075 1411 aa14.01□□□□□ -0.17
BRCC3-205ENST00000399026 KIAA0586Q9BVV6 1533 aa14□□□□□ -0.17
BRCC3-205ENST00000399026 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
BRCC3-205ENST00000399026 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
BRCC3-205ENST00000399026 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
BRCC3-205ENST00000399026 PRG4Q92954 1404 aaPredicted RBP13.98□□□□□ -0.17
BRCC3-205ENST00000399026 KIF21BO75037 1637 aa13.97□□□□□ -0.17
BRCC3-205ENST00000399026 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
BRCC3-205ENST00000399026 CYB5RLQ6IPT4 315 aa13.92□□□□□ -0.18
BRCC3-205ENST00000399026 JPH4Q96JJ6 628 aa13.91□□□□□ -0.18
BRCC3-205ENST00000399026 KIAA0556O60303 1618 aa13.9□□□□□ -0.18
BRCC3-205ENST00000399026 UGGT2Q9NYU1 1516 aa13.9□□□□□ -0.19
BRCC3-205ENST00000399026 DISP1Q96F81 1524 aa13.88□□□□□ -0.19
BRCC3-205ENST00000399026 GOLGA3Q08378 1498 aa13.85□□□□□ -0.19
BRCC3-205ENST00000399026 CARMIL2Q6F5E8 1435 aa13.84□□□□□ -0.19
BRCC3-205ENST00000399026 ADCY10Q96PN6 1610 aa13.83□□□□□ -0.2
BRCC3-205ENST00000399026 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
BRCC3-205ENST00000399026 TTBK1Q5TCY1 1321 aaPredicted RBP13.82□□□□□ -0.2
BRCC3-205ENST00000399026 TNIKQ9UKE5 1360 aa13.8□□□□□ -0.2
BRCC3-205ENST00000399026 PTPRGP23470 1445 aa13.77□□□□□ -0.21
BRCC3-205ENST00000399026 RANGAP1P46060 587 aaPredicted RBP13.77□□□□□ -0.21
BRCC3-205ENST00000399026 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
BRCC3-205ENST00000399026 ABCC2Q92887 1545 aa13.74□□□□□ -0.21
BRCC3-205ENST00000399026 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
BRCC3-205ENST00000399026 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
BRCC3-205ENST00000399026 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
BRCC3-205ENST00000399026 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
BRCC3-205ENST00000399026 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
BRCC3-205ENST00000399026 PLB1Q6P1J6 1458 aa13.72□□□□□ -0.21
BRCC3-205ENST00000399026 ABCA8O94911 1581 aa13.71□□□□□ -0.21
BRCC3-205ENST00000399026 P3H3Q8IVL6 736 aa13.71□□□□□ -0.21
BRCC3-205ENST00000399026 UACAQ9BZF9 1416 aa13.71□□□□□ -0.22
BRCC3-205ENST00000399026 ZCCHC11Q5TAX3 1644 aaKnown RBP13.7□□□□□ -0.22
BRCC3-205ENST00000399026 UHRF1BP1LA0JNW5 1464 aa13.69□□□□□ -0.22
BRCC3-205ENST00000399026 MAPKBP1O60336 1514 aa13.68□□□□□ -0.22
BRCC3-205ENST00000399026 RAPGEF6Q8TEU7 1601 aa13.68□□□□□ -0.22
BRCC3-205ENST00000399026 KIF13AQ9H1H9 1805 aa13.67□□□□□ -0.22
BRCC3-205ENST00000399026 ARHGAP35Q9NRY4 1499 aa13.67□□□□□ -0.22
BRCC3-205ENST00000399026 DIP2BQ9P265 1576 aa13.64□□□□□ -0.23
BRCC3-205ENST00000399026 KDM5BQ9UGL1 1544 aa13.64□□□□□ -0.23
BRCC3-205ENST00000399026 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
BRCC3-205ENST00000399026 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
BRCC3-205ENST00000399026 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
BRCC3-205ENST00000399026 ASXL2Q76L83 1435 aa13.6□□□□□ -0.23
BRCC3-205ENST00000399026 NUP153P49790 1475 aaKnown RBP13.6□□□□□ -0.23
BRCC3-205ENST00000399026 PCF11O94913 1555 aaKnown RBP13.59□□□□□ -0.23
BRCC3-205ENST00000399026 CLIP1P30622 1438 aa13.59□□□□□ -0.23
BRCC3-205ENST00000399026 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
BRCC3-205ENST00000399026 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
BRCC3-205ENST00000399026 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms